Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_02g0027300 | OGI:02075060 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr02:28189678-28191037 | ||||||||
| Gene Symbol | ERF32, OsERF#032, OsERF032, OsERF32, AP2/EREBP#021, AP2/EREBP21, CR223, OsDREB4-1 | ||||||||||
| DNA seq | atggaagctgccgcgatccatgcgcccaccaccaccacctcctccgactccggctcgtgcgtcaccaatggcacgcgagagaagcgcgagatctctaagcacaagcagctcaagcggaagaggagcacctctcctgctcctcctcccggctgcggcggcggccaaggacaggaagcggcggtggagactgacgctgacgctggcgccgccggccgtggtggcggcgccggcgaggaggagagcagcagctgcggtggcgctggcgccggcgagggcgagcgcaagaggggtgacgccggcaggcacccgtcataccgcggcgtgaggcggcggagctggggcaagtgggtgtcggagatccgcgagccgcgcaagaagtcgcgcatctggctcggcaccttcccgacggcggagatggccgcgcgcgcgcacgacgtggccgcgctcgccatcaagggccgcgccgcgcacctcaacttcccgagcctcgcccacacgctcccgcgcccggcctccacctcaccctccgacatccaggccgccgccgccctcgccgcagctgcagccgccaccgaccaatgcgagtcctcctcctctgccgtcgccgccgccaccgccaccgacgccgaggcggcggagtccacctcgtcggccgcggccagcccgtgcgccgccaccagcagcgtcgaggagaacgcgctgttcgacctgcccgaccttctcctcgacctgagcgacgggctctggtgctcacccgtctggacgacagcgccggccgatcagtacgacgccggcgacgacggcgacgacgccgcggcgccgctcctgtgggccgagcagtgctggatggacgcccccgcggcgcccgtgcagcctgactaattaagccaatccacctgctccgactcgccggccggccattgcaccggttgggttggtcgcagcagtcaacctatagacgccatgggcgtctctttcttttctctctgttttttttttcttttttggaggtgccttgcttcgtgtgcagtgaaacggcgccacgccgcgtttgcggtgggcgatcaggcgatgtgatttaattaattacggaggggaagtcgttttagcgcgaggtgaaacagcggattgcatcgatcggcggcaagaactgcctagacatttcattgatcaaattactaattactccccttcgtggttgtgtgtaaatcaattcggcaaacattttgggagagcctcgtgtaatttcgtctttttcttcttcttcttttttatttttacagtagtagcgtgcattgtaaattttagagatgtgctatatatgcctatggcctaaaaagtattcagagatgtgctatat
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| CDS seq | atggaagctgccgcgatccatgcgcccaccaccaccacctcctccgactccggctcgtgcgtcaccaatggcacgcgagagaagcgcgagatctctaagcacaagcagctcaagcggaagaggagcacctctcctgctcctcctcccggctgcggcggcggccaaggacaggaagcggcggtggagactgacgctgacgctggcgccgccggccgtggtggcggcgccggcgaggaggagagcagcagctgcgctgcagccgccaccgaccaatgcgagtcctcctcctctgccgtcgccgccgccaccgccaccgacgccgaggcggcggagtccacctcgtcggccgcggccagcccgtgcgccgccaccagcagcgtcgaggagaacgcgctgttcgacctgcccgaccttctcctcgacctgagcgacgggctctggtgctcacccgtctggacgacagcgccggccgatcagtacgacgccggcgacgacggcgacgacgccgcggcgccgctcctgtgggccgagcagtgctggatggacgcccccgcggcgcccgtgcagcctgactaa
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| Protein seq | MEAAAIHAPTTTTSSDSGSCVTNGTREKREISKHKQLKRKRSTSPAPPPGCGGGQGQEAAVETDADAGAAGRGGGAGEEESSSCAAAATDQCESSSSAVAAATATDAEAAESTSSAAASPCAATSSVEENALFDLPDLLLDLSDGLWCSPVWTTAPADQYDAGDDGDDAAAPLLWAEQCWMDAPAAPVQPD |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0027300 | OsLiXu_02g0027300.01 | Chr02 | 28189678 | 28191037 | + | NAM | ||
| CDS seq | atggaagctgccgcgatccatgcgcccaccaccaccacctcctccgactccggctcgtgcgtcaccaatggcacgcgagagaagcgcgagatctctaagcacaagcagctcaagcggaagaggagcacctctcctgctcctcctcccggctgcggcggcggccaaggacaggaagcggcggtggagactgacgctgacgctggcgccgccggccgtggtggcggcgccggcgaggaggagagcagcagctgcgctgcagccgccaccgaccaatgcgagtcctcctcctctgccgtcgccgccgccaccgccaccgacgccgaggcggcggagtccacctcgtcggccgcggccagcccgtgcgccgccaccagcagcgtcgaggagaacgcgctgttcgacctgcccgaccttctcctcgacctgagcgacgggctctggtgctcacccgtctggacgacagcgccggccgatcagtacgacgccggcgacgacggcgacgacgccgcggcgccgctcctgtgggccgagcagtgctggatggacgcccccgcggcgcccgtgcagcctgactaa
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| Protein seq | MEAAAIHAPTTTTSSDSGSCVTNGTREKREISKHKQLKRKRSTSPAPPPGCGGGQGQEAAVETDADAGAAGRGGGAGEEESSSCAAAATDQCESSSSAVAAATATDAEAAESTSSAAASPCAATSSVEENALFDLPDLLLDLSDGLWCSPVWTTAPADQYDAGDDGDDAAAPLLWAEQCWMDAPAAPVQPD |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.436830 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0656600 | RBH | 0.348528 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g43940 | RBH | 0.228200 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0656600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0027610 | RBH | 0.0 | 0.0 | 3.125618 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0027710 | RBH | 0.000000 | 0.727591 | 0.118957 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0027550 | RBH | 0.148605 | 0.0 | 0.934507 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0027160 | RBH | 0.0 | 0.081848 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0027280 | RBH | 0.730012 | 0.0 | 1.577066 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0431500 | RBH | 1.414866 | 1.109791 | 0.155701 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0027090 | RBH | 0.0 | 0.000000 | 0.109162 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0459200 | RBH | 3.714028 | 0.435343 | 1.0183085 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0027420 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0027100 | RBH | 0.0 | 2.177218 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0027470 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0027000 | RBH | 0.0 | 1.065783 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G027590 | RBH | 0.0 | 0.617657 | 0.738440 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0027330 | RBH | 0.0 | 5.312822 | 0.577144 |
