Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_02g0019470 | OGI:02055850 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr02:20583001-20589894 | ||||||||
| Gene Symbol | CTR2, OsCTR2 | ||||||||||
| DNA seq | tgtgaaaaggttttgattttggggatattgtatcgaacatttccataaacatctttacatacacagacacacagtccttttcttctcaaggacaatttagacagtgctagggaccaaagacaatgcaatggaatttcacaagcaatcatactagcaacagcatgcatgaacaatacacctaaaagcattaactgaggcaaaaaaaaaatgatgggctttatttaaggagtctgttcattttgtatgtacggtatagcatggtatgaatatatacattatcatgaaaatgaactttaccagtgaaataactaatttagccgtccagggaagagctataactataagcttaaatagctttcggagcaaaaatattactgacaataatcggaagccaaaagaaagaaaaatgtctgaattcaaacctaagaagttaacgactaagatagctagtcacctttgtaagttgtcaagggctcgtatcttcagggttttgaaggtgcccatgaaccgttaactgatatcctcttgaagttgatggggagttctgattagaggtttcagggattccatgatactggcaaaagacggtcgtcgccagggttctctgcaaataaaaataaaatattcatcaaaccaacttggctacaagttgtgagaagaaacatataacagtatattatagatactttgtccagcaggattccattattgccgccacttttggatcaacgctacttggaatttcaagccttcgcccattaaaaccaacagctgctacaacctgcaagtgaacaggtagactttgttcaattcagttcgtccgaagttggaaaatatccgtgtgatgaagaaacaggagatacaaacctgagctggattcaaagtactccatggttgttgcaatgtcatgagctcccataggataacaccaaagctgtagacatcagacttctcatttgatggctcatctcgtataacttctggtgccatccactcaggctagagaatattacatcgaaagcacttactagcacgatttagctgaaaaaaaatcaacaaataaaagtaacggtaatatgaacttacagtccctgctgcagtcttggaagacaaaaatgtgtttgccttcaatctggagagaccaaagtcacagacctgcagcattgtaggggcaatttgttgttagttggagataagattaaatagggaacaactgccaattatattagaaagaaagataatcctaatgatcataacaactatacccattcaagtagaaaaaataataataataaagtaccacatagagtaattgaagataaagttttctcataaaaggggaaacaccattggtgtggtggcggagtcatgggtgcatgattccacccactagagttcaaattctggtgtccataaatatggccatgtgcatctttggttaaaaggggaaaaaccattggtgtggtggcggagtcatggggcagaggccggaagttatactttgtccaaaaacaaagtagaaaaaataacaaaaagtaccacaaagagtaatgtgaaatcaaacaggtcttaaaatatggcaaaatgggtaaaaggatataccttcacagtgtactttttatcaaccaacagatttggtgactttagatcccggtggactataggaggattgcgcttgtgaaggtaattcatccccttagcctggaaacaaaggtacacaaaatcaatgatttttataaagaagcacctacaattttgattctacggtcaacctttactttatataaagcatatgtccagtcattctgttagacctaaattctgtattgagataagtatatatgattttaccacgtcaaaagccatactcaatcgccgcttctcatctagattttcccttgcaccatgcttgtgcaaaatcctgtataggctacctctgcattcaagaaaaaaaacttatgtgggaactacaagctagactagaggtaagcacatagtttacatcaattttgaaatagtaatcagaaagttcaacacaccttgatagatattctgtcacaatcgaaagttttggtggctgagtaacagcacccataaaaaggacaatgtttggatggcgcagacttttcataattgcaacctacagaggagaatacctaacatgttaagtgacatggacattacatgattaaatcaacttatacatgtgaccttgaatggggcaacatcttaacattctctgttaaaaaaagaaagaatactgggcattaactttgttgcagaggaaagatcagttcagaagcatctagtcatgcacatcgttgtataacatatgtccattatatgtaggaaaattcaaagcgctgctgctttcatccctatcagatttggtagtcgcaaaggaagaccaatataaattgtccactggaaattctgatgttatacctccctaagaaattctttgagacgctctgggtggaagtcttgctccatcaaaatctttacagcaacatcctgagacatgaaaggcaagagtgttaattgagctctcctatcctcaattcctcacatgaagggcctgtttggcacagctccagctccagctctacccctcctggagctggagctcagccaaacagtttcagctccactaaaactgggagtggagttgggtggagctctctcacaaaatgaactagagttgtggagctgggtttaggcagctccacaactccactccagacccaactcttggagctaaatttaggagttagagctgtaccaaacaggcccgaagaataagtacataactgtgggacggttgagtgtttcaggttattgaaacaacatttgttaacatctctcctaaaatcatatattggcacaccaaaagggaaatacaggaggcgtagttgtatgcagtacatgttagaccggtcactattcaagtagtaacttgtaacacataagcacactgtaaaatgtgcttgtaataaaaagagacataccgagccattccaatccgcacggtgcacggttccaaatgagcctgtcatttttctcaattagtgcacactacaaaaatatcaaaatctggaaataggcagcttcatgatcattcattaattttcacaatgtgaggtcacggatgtccaaaatatccaacttgttcaccttcgcaaaatatgtgtaaaataaaaactgcatgctattaatttgccttgcgccttgttctagccttgtgcataactgtggtaaaactctagtgaagaaggcacctagttctagccttgtgccttggatgcgcataccgaactttcagtaatttgtggttttgtacaagattggccctatttaatatcatgcattggtactataatccatggagttaattgcaaatattctttgtagtctcacactaaacgttgtggttaactttcattaataacatgcttatgtaattagtagggttagaagaggctaaatgatacaaaagaatgcccaatgtcactcttcattgtacttgctcatgtaagccagaacaacttgctttattgattggaggttgtatgtggtatagagatttttttttttaaaaaaaaaaaagctaagccagaacaattcgttttgttgattggaggtcatgtgtagtataatagagataaaaaaaactaagtacatcgtacaaaaacactattaaaaaacaaaaacgtaccagctccaattttctctttcaaaacaagttcactccaaggaataatcaagtcttcaatgtcgagagatatatcactgaaggggtcactttgtgcagattgtgtatcgtcaggagaactgaaatattcatcagtattatcaacttcggatgatggaaagtggaaataactataacaatttttagggaggatcctgctgatgcacctcttctgaataagaaaattgccatcttgaccactggactgggcaccacgactacgatgtgaaaagttagcttgaaaatcactgtttgttgcaggtgataagtttggaccaatatttgatcccatggcctcatctaagtcaacaaccgtccctgaaactattcaaaatagtaaaagacacaatcttttgaaaagatcttaaataTtttttttagtcctgctttctgaaattccaattcaagaattgaaatagtgatgataaaaaatatcaattggtcagttactcagtttgcttgcttagaatagtaggcagttcattttccatcttttcttttaaaacttttgaagaccattcaggagaaaatgactagacctgaattgtgaaactacagctaagaactattgtaaaccatactatttcatccaaaaaagttttaagttttaaCatctaaaatgattgtgctgaaagattgttgcctatatcaaaactagatgtcaatgacataaagtttctcccagcaaaaaaaaatctaaaaactatctatttgaacatagaacacaacatgctcacagcagcatcagctgttaattttaaaagtttaataatgtcaaaatctcttcctatacagatcagcccatttgagatattacttttaatatcacatcatgcgaagagtacttaaataaatagtatttagaagacagaaaagtatgatctgacctgctgctggatcattgaacatcatatttagcgattggcaatcaaggaaatattgcttcgccaatgacttgaagttattaacaatatcagctgaattgtattttggtgggcgcaatggtgaagaaactgaaatggatgagagcccatttaagagggagtcaggttcagataagaagcctgggttccctatcaaatcaatcagatattccctgataccaaaaataaaatagaagtcaagaagtgattagatgctatttcaacattgaaaactggagagtgtaaaagaacatagaaaactggaaaaataaagaatattcggagcaagattgtacagataacttgagaacataagttccatttatatttttgccattttcacatttataacaatgttataccctctttctatgacattgttagatcagacaaggaatgtaattggtgtaactggggcacaactctttcttcatattctctcttttttaacctttgatgacccaaaatctgtagaaatagtgcaagtcattcatcaggattacaaacctgtcattaccaaagtgcaccaggcatgaagcagcaccagcagatttgcagtacctgcatcccctcacaactcgacatgggagactgatagtgtctgctaaggtcttcccccaccaaagaaaacagaataggattattatcaaaaacaaattgaagagacaagagagtatcaggactggcaactaaaatgaaataggatcataagaaactgatcttttaaagtagtgcagctcctatgtatgcttgtgagtgcatcaatatcactataattcaccatctaatgtattttagggcaatcaggaatattgcatgatgagctttgtaaaatcataaaaacaaagttccagcgctaacatggaaaatattgccactaaatacgaagatttaatagattttagaacatagcgatagaagcaaggtgaccttaaacagcaacgatcggtgccggcaaagaccgattgataacttcccaattggaagcacaacagaacctgaactaatcttcaggaacccggcagagtctctccaccggggacacagttcatgttcttcggtagacgcaacggaaccccttcaacattagtgagacacatgtaagacagagaaaatgtaccaaaagtggcaatttccttatcaactcccagtctctcaccccatctttgaggacacaatgccagcaaggcgagtggtgatttcccttgagtcagcgcggctccgagaaacgtcaatcgcggtgcttatcagttgcctcagatcatagtcgaccaccctatctatgaggaccacctccacggatgactcggtgggattcatagccttgagcgactcgatcgagggcactcgggcgccatcgcgcaagtcattgcagagcgtccatacgaagggatccatcccatgaatgaggtagaagccatccaggaccttgtcggagtaggacaagctgccattcacctgccaagacagcgagatggtcacttggagaatcggtatacatctttcggtgaactggtgtgtgcacgcggtgagtgcgaacccagaagcgatgcgagagggattggggcgagggcgcgtcgcggtggtggtcgtcggccgccgccacggcggagtcgaggaagttggggtcgggggcggtggaggcctcggagcagagacggagcgcgagggcgagctggagctggtacgcctcctccgcctgctgcgcccagctcttgctgccgccgccgccgctgctgccggccgggcgatcggcggggtcgccgcccttgtccgcagtggcgagggtggagacggaggagaagccatccccgtcgtcgccggcgctgctcccgctcgagtgccgctgcagccgcagccagtccgccacgccgagcccgcgggacgcgtcgccgtcgtcgcagtgcggcgagccgccaccgttgccgatgctggcgggcggggaggtggcgaggaggctgtacgccacggcagcgggcgcggcgggcggaggcgcaggccctggcgaggcacgcctcccgccgccgccgccgccgccgagcaccatcgcgggccacttggagtcggccttcatcgtctacccgcgctgctgcgtcgtggcggtggcggagttgcgctgaagtcgcatgtgcgggagaggcgatcgaggcgtgggcgtgggcgtggccgcgtgggtggggattccttcgcggacggagttgtcgagacggacggcatggc
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| CDS seq | atgaaggccgactccaagtggcccgcgatggtgctcggcggcggcggcggcggcgggaggcgtgcctcgccagggcctgcgcctccgcccgccgcgcccgctgccgtggcgtacagcctcctcgccacctccccgcccgccagcatcggcaacggtggcggctcgccgcactgcgacgacggcgacgcgtcccgcgggctcggcgtggcggactggctgcggctgcagcggcactcgagcgggagcagcgccggcgacgacggggatggcttctcctccgtctccaccctcgccactgcggacaagggcggcgaccccgccgatcgcccggccggcagcagcggcggcggcggcagcaagagctgggcgcagcaggcggaggaggcgtaccagctccagctcgccctcgcgctccgtctctgctccgaggcctccaccgcccccgaccccaacttcctcgactccgccgtggcggcggccgacgaccaccaccgcgacgcgccctcgccccaatccctctcgcatcgcttctgggtgaatggcagcttgtcctactccgacaaggtcctggatggcttctacctcattcatgggatggatcccttcgtatggacgctctgcaatgacttgcgcgatggcgcccgagtgccctcgatcgagtcgctcaaggctatgaatcccaccgagtcatccgtggaggtggtcctcatagatagggtggtcgactatgatctgaggcaactgataagcaccgcgattgacgtttctcggagccgcgctgactcaagggaaatcaccactcgccttgctggcattgtgtcctcaaagatggggggttccgttgcgtctaccgaagaacatgaactgtgtccccggtggagagactctgccgggttcctgaagattagttcaggttctgttgtgcttccaattgggaagttatcaatcggtctttgccggcaccgatcgttgctgtttaagaccttagcagacactatcagtctcccatgtcgagttgtgaggggatgcaggtactgcaaatctgctggtgctgcttcatgcctggtgcactttggtaatgacagggaatatctgattgatttgatagggaacccaggcttcttatctgaacctgactccctcttaaatgggctctcatccatttcagtttcttcaccattgcgcccaccaaaatacaattcagctgatattgttaataacttcaagtcattggcgaagcaatatttccttgattgccaatcgctaaatatgatgttcaatgatccagcagcagtttcagggacggttgttgacttagatgaggccatgggatcaaatattggtccaaacttatcacctgcaacaaacagtgattttcaagctaacttttcacatcgtagtcgtggtgcccagtccagtggtcaagatggcaattttcttattcagaagagttctcctgacgatacacaatctgcacaaagtgaccccttcagtgatatatctctcgacattgaagacttgattattccttggagtgaacttgttttgaaagagaaaattggagctggctcatttggaaccgtgcaccgtgcggattggaatggctcggatgttgctgtaaagattttgatggagcaagacttccacccagagcgtctcaaagaatttcttagggaggttgcaattatgaaaagtctgcgccatccaaacattgtcctttttatgggtgctgttactcagccaccaaaactttcgattgtgacagaatatctatcaagaggtagcctatacaggattttgcacaagcatggtgcaagggaaaatctagatgagaagcggcgattgagtatggcttttgacgtggctaaggggatgaattaccttcacaagcgcaatcctcctatagtccaccgggatctaaagtcaccaaatctgttggttgataaaaagtacactgtgaaggtctgtgactttggtctctccagattgaaggcaaacacatttttgtcttccaagactgcagcagggactcctgagtggatggcaccagaagttatacgagatgagccatcaaatgagaagtctgatgtctacagctttggtgttatcctatgggagctcatgacattgcaacaaccatggagtactttgaatccagctcaggttgtagcagctgttggttttaatgggcgaaggcttgaaattccaagtagcgttgatccaaaagtggcggcaataatggaatcctgctggacaaaagaaccctggcgacgaccgtcttttgccagtatcatggaatccctgaaacctctaatcagaactccccatcaacttcaagaggatatcagttaa
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| Protein seq | MKADSKWPAMVLGGGGGGGRRASPGPAPPPAAPAAVAYSLLATSPPASIGNGGGSPHCDDGDASRGLGVADWLRLQRHSSGSSAGDDGDGFSSVSTLATADKGGDPADRPAGSSGGGGSKSWAQQAEEAYQLQLALALRLCSEASTAPDPNFLDSAVAAADDHHRDAPSPQSLSHRFWVNGSLSYSDKVLDGFYLIHGMDPFVWTLCNDLRDGARVPSIESLKAMNPTESSVEVVLIDRVVDYDLRQLISTAIDVSRSRADSREITTRLAGIVSSKMGGSVASTEEHELCPRWRDSAGFLKISSGSVVLPIGKLSIGLCRHRSLLFKTLADTISLPCRVVRGCRYCKSAGAASCLVHFGNDREYLIDLIGNPGFLSEPDSLLNGLSSISVSSPLRPPKYNSADIVNNFKSLAKQYFLDCQSLNMMFNDPAAVSGTVVDLDEAMGSNIGPNLSPATNSDFQANFSHRSRGAQSSGQDGNFLIQKSSPDDTQSAQSDPFSDISLDIEDLIIPWSELVLKEKIGAGSFGTVHRADWNGSDVAVKILMEQDFHPERLKEFLREVAIMKSLRHPNIVLFMGAVTQPPKLSIVTEYLSRGSLYRILHKHGARENLDEKRRLSMAFDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKTAAGTPEWMAPEVIRDEPSNEKSDVYSFGVILWELMTLQQPWSTLNPAQVVAAVGFNGRRLEIPSSVDPKVAAIMESCWTKEPWRRPSFASIMESLKPLIRTPHQLQEDIS |
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| Function | Serine/threonine-protein kinase CTR1 [UniProtKB/Swiss-Prot:Q05609] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0019470 | OsLiXu_02g0019470.01 | Chr02 | 20583001 | 20589894 | - | NAM | ||
| CDS seq | atgaaggccgactccaagtggcccgcgatggtgctcggcggcggcggcggcggcgggaggcgtgcctcgccagggcctgcgcctccgcccgccgcgcccgctgccgtggcgtacagcctcctcgccacctccccgcccgccagcatcggcaacggtggcggctcgccgcactgcgacgacggcgacgcgtcccgcgggctcggcgtggcggactggctgcggctgcagcggcactcgagcgggagcagcgccggcgacgacggggatggcttctcctccgtctccaccctcgccactgcggacaagggcggcgaccccgccgatcgcccggccggcagcagcggcggcggcggcagcaagagctgggcgcagcaggcggaggaggcgtaccagctccagctcgccctcgcgctccgtctctgctccgaggcctccaccgcccccgaccccaacttcctcgactccgccgtggcggcggccgacgaccaccaccgcgacgcgccctcgccccaatccctctcgcatcgcttctgggtgaatggcagcttgtcctactccgacaaggtcctggatggcttctacctcattcatgggatggatcccttcgtatggacgctctgcaatgacttgcgcgatggcgcccgagtgccctcgatcgagtcgctcaaggctatgaatcccaccgagtcatccgtggaggtggtcctcatagatagggtggtcgactatgatctgaggcaactgataagcaccgcgattgacgtttctcggagccgcgctgactcaagggaaatcaccactcgccttgctggcattgtgtcctcaaagatggggggttccgttgcgtctaccgaagaacatgaactgtgtccccggtggagagactctgccgggttcctgaagattagttcaggttctgttgtgcttccaattgggaagttatcaatcggtctttgccggcaccgatcgttgctgtttaagaccttagcagacactatcagtctcccatgtcgagttgtgaggggatgcaggtactgcaaatctgctggtgctgcttcatgcctggtgcactttggtaatgacagggaatatctgattgatttgatagggaacccaggcttcttatctgaacctgactccctcttaaatgggctctcatccatttcagtttcttcaccattgcgcccaccaaaatacaattcagctgatattgttaataacttcaagtcattggcgaagcaatatttccttgattgccaatcgctaaatatgatgttcaatgatccagcagcagtttcagggacggttgttgacttagatgaggccatgggatcaaatattggtccaaacttatcacctgcaacaaacagtgattttcaagctaacttttcacatcgtagtcgtggtgcccagtccagtggtcaagatggcaattttcttattcagaagagttctcctgacgatacacaatctgcacaaagtgaccccttcagtgatatatctctcgacattgaagacttgattattccttggagtgaacttgttttgaaagagaaaattggagctggctcatttggaaccgtgcaccgtgcggattggaatggctcggatgttgctgtaaagattttgatggagcaagacttccacccagagcgtctcaaagaatttcttagggaggttgcaattatgaaaagtctgcgccatccaaacattgtcctttttatgggtgctgttactcagccaccaaaactttcgattgtgacagaatatctatcaagaggtagcctatacaggattttgcacaagcatggtgcaagggaaaatctagatgagaagcggcgattgagtatggcttttgacgtggctaaggggatgaattaccttcacaagcgcaatcctcctatagtccaccgggatctaaagtcaccaaatctgttggttgataaaaagtacactgtgaaggtctgtgactttggtctctccagattgaaggcaaacacatttttgtcttccaagactgcagcagggactcctgagtggatggcaccagaagttatacgagatgagccatcaaatgagaagtctgatgtctacagctttggtgttatcctatgggagctcatgacattgcaacaaccatggagtactttgaatccagctcaggttgtagcagctgttggttttaatgggcgaaggcttgaaattccaagtagcgttgatccaaaagtggcggcaataatggaatcctgctggacaaaagaaccctggcgacgaccgtcttttgccagtatcatggaatccctgaaacctctaatcagaactccccatcaacttcaagaggatatcagttaa
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| Protein seq | MKADSKWPAMVLGGGGGGGRRASPGPAPPPAAPAAVAYSLLATSPPASIGNGGGSPHCDDGDASRGLGVADWLRLQRHSSGSSAGDDGDGFSSVSTLATADKGGDPADRPAGSSGGGGSKSWAQQAEEAYQLQLALALRLCSEASTAPDPNFLDSAVAAADDHHRDAPSPQSLSHRFWVNGSLSYSDKVLDGFYLIHGMDPFVWTLCNDLRDGARVPSIESLKAMNPTESSVEVVLIDRVVDYDLRQLISTAIDVSRSRADSREITTRLAGIVSSKMGGSVASTEEHELCPRWRDSAGFLKISSGSVVLPIGKLSIGLCRHRSLLFKTLADTISLPCRVVRGCRYCKSAGAASCLVHFGNDREYLIDLIGNPGFLSEPDSLLNGLSSISVSSPLRPPKYNSADIVNNFKSLAKQYFLDCQSLNMMFNDPAAVSGTVVDLDEAMGSNIGPNLSPATNSDFQANFSHRSRGAQSSGQDGNFLIQKSSPDDTQSAQSDPFSDISLDIEDLIIPWSELVLKEKIGAGSFGTVHRADWNGSDVAVKILMEQDFHPERLKEFLREVAIMKSLRHPNIVLFMGAVTQPPKLSIVTEYLSRGSLYRILHKHGARENLDEKRRLSMAFDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKTAAGTPEWMAPEVIRDEPSNEKSDVYSFGVILWELMTLQQPWSTLNPAQVVAAVGFNGRRLEIPSSVDPKVAAIMESCWTKEPWRRPSFASIMESLKPLIRTPHQLQEDIS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0019470 | OsLiXu_02g0019470.02 | Chr02 | 20583001 | 20589894 | - | NAM | ||
| CDS seq | atgaaggccgactccaagtggcccgcgatggtgctcggcggcggcggcggcggcgggaggcgtgcctcgccagggcctgcgcctccgcccgccgcgcccgctgccgtggcgtacagcctcctcgccacctccccgcccgccagcatcggcaacggtggcggctcgccgcactgcgacgacggcgacgcgtcccgcgggctcggcgtggcggactggctgcggctgcagcggcactcgagcgggagcagcgccggcgacgacggggatggcttctcctccgtctccaccctcgccactgcggacaagggcggcgaccccgccgatcgcccggccggcagcagcggcggcggcggcagcaagagctgggcgcagcaggcggaggaggcgtaccagctccagctcgccctcgcgctccgtctctgctccgaggcctccaccgcccccgaccccaacttcctcgactccgccgtggcggcggccgacgaccaccaccgcgacgcgccctcgccccaatccctctcgcatcgcttctgggtgaatggcagcttgtcctactccgacaaggtcctggatggcttctacctcattcatgggatggatcccttcgtatggacgctctgcaatgacttgcgcgatggcgcccgagtgccctcgatcgagtcgctcaaggctatgaatcccaccgagtcatccgtggaggtggtcctcatagatagggtggtcgactatgatctgaggcaactgataagcaccgcgattgacgtttctcggagccgcgctgactcaagggaaatcaccactcgccttgctggcattgtgtcctcaaagatggggggttccgttgcgtctaccgaagaacatgaactgtgtccccggtggagagactctgccgggttcctgaagattagttcaggttctgttgtgcttccaattgggaagttatcaatcggtctttgccggcaccgatcgttgctgtttaagaccttagcagacactatcagtctcccatgtcgagttgtgaggggatgcaggtactgcaaatctgctggtgctgcttcatgcctggtgcactttggtaatgacagggaatatctgattgatttgatagggaacccaggcttcttatctgaacctgactccctcttaaatgggctctcatccatttcagtttcttcaccattgcgcccaccaaaatacaattcagctgatattgttaataacttcaagtcattggcgaagcaatatttccttgattgccaatcgctaaatatgatgttcaatgatccagcagcagggacggttgttgacttagatgaggccatgggatcaaatattggtccaaacttatcacctgcaacaaacagtgattttcaagctaacttttcacatcgtagtcgtggtgcccagtccagtggtcaagatggcaattttcttattcagaagagttctcctgacgatacacaatctgcacaaagtgaccccttcagtgatatatctctcgacattgaagacttgattattccttggagtgaacttgttttgaaagagaaaattggagctggctcatttggaaccgtgcaccgtgcggattggaatggctcggatgttgctgtaaagattttgatggagcaagacttccacccagagcgtctcaaagaatttcttagggaggttgcaattatgaaaagtctgcgccatccaaacattgtcctttttatgggtgctgttactcagccaccaaaactttcgattgtgacagaatatctatcaagaggtagcctatacaggattttgcacaagcatggtgcaagggaaaatctagatgagaagcggcgattgagtatggcttttgacgtggctaaggggatgaattaccttcacaagcgcaatcctcctatagtccaccgggatctaaagtcaccaaatctgttggttgataaaaagtacactgtgaaggtctgtgactttggtctctccagattgaaggcaaacacatttttgtcttccaagactgcagcagggactcctgagtggatggcaccagaagttatacgagatgagccatcaaatgagaagtctgatgtctacagctttggtgttatcctatgggagctcatgacattgcaacaaccatggagtactttgaatccagctcaggttgtagcagctgttggttttaatgggcgaaggcttgaaattccaagtagcgttgatccaaaagtggcggcaataatggaatcctgctggacaaaagaaccctggcgacgaccgtcttttgccagtatcatggaatccctgaaacctctaatcagaactccccatcaacttcaagaggatatcagttaa
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| Protein seq | MKADSKWPAMVLGGGGGGGRRASPGPAPPPAAPAAVAYSLLATSPPASIGNGGGSPHCDDGDASRGLGVADWLRLQRHSSGSSAGDDGDGFSSVSTLATADKGGDPADRPAGSSGGGGSKSWAQQAEEAYQLQLALALRLCSEASTAPDPNFLDSAVAAADDHHRDAPSPQSLSHRFWVNGSLSYSDKVLDGFYLIHGMDPFVWTLCNDLRDGARVPSIESLKAMNPTESSVEVVLIDRVVDYDLRQLISTAIDVSRSRADSREITTRLAGIVSSKMGGSVASTEEHELCPRWRDSAGFLKISSGSVVLPIGKLSIGLCRHRSLLFKTLADTISLPCRVVRGCRYCKSAGAASCLVHFGNDREYLIDLIGNPGFLSEPDSLLNGLSSISVSSPLRPPKYNSADIVNNFKSLAKQYFLDCQSLNMMFNDPAAGTVVDLDEAMGSNIGPNLSPATNSDFQANFSHRSRGAQSSGQDGNFLIQKSSPDDTQSAQSDPFSDISLDIEDLIIPWSELVLKEKIGAGSFGTVHRADWNGSDVAVKILMEQDFHPERLKEFLREVAIMKSLRHPNIVLFMGAVTQPPKLSIVTEYLSRGSLYRILHKHGARENLDEKRRLSMAFDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKTAAGTPEWMAPEVIRDEPSNEKSDVYSFGVILWELMTLQQPWSTLNPAQVVAAVGFNGRRLEIPSSVDPKVAAIMESCWTKEPWRRPSFASIMESLKPLIRTPHQLQEDIS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr02 | 20587069 | 20587639 | - | OsLiXu_02g0019470.01 | OsLiXu_02g0019470.01,OsLiXu_02g0019470.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.509242 | 2.061838 | 1.383622 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0527600 | RBH | 1.098616 | 1.189850 | 0.977365 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g32610 | RBH | 0.888634 | 0.838348 | 0.251356 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0527600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0019570 | RBH | 0.262311 | 18.278179 | 3.356858 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0019680 | RBH | 0.078420 | 3.110862 | 1.292371 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0019620 | RBH | 0.308152 | 10.980105 | 4.385288 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0019400 | RBH | 0.044706 | 0.207057 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0019360 | RBH | 5.013612 | 15.263864 | 12.908810 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0320000 | RBH | 2.7175775 | 17.2124005 | 31.6917455 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0019070 | RBH | 0.062524 | 0.845381 | 0.773655 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0340200 | RBH | 5.3418495 | 19.859783 | 10.0508135 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0019610 | RBH | 0.173406 | 0.403953 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0019340 | RBH | 0.422783 | 17.665842 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0019750 | RBH | 3.083347 | 4.058493 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0012580 | RBH | 0.307985 | 0.713151 | 0.884871 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0019260 | RBH | 0.057025 | 5.595629 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G019690 | RBH | 0.375110 | 3.589133 | 0.872946 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0019410 | RBH | 0.330322 | 19.023560 | 4.352383 |
