Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_02g0019050 | OGI:02054950 | 15/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr02:20114719-20115438 | ||||||||
| Gene Symbol | ERF81, OsERF#081, OsERF081, OsERF81, AP2/EREBP#014, AP2/EREBP14 | ||||||||||
| DNA seq | tcagtagtaatacgaggaggacgacgacccgccgagctggaagccgtcggcggcgacctcgtcggccgcgggcatcggcgagaacatcgggctgtgcacgtacccctcctcgaagtacaccgccgccgccgccgccgacgcgcccgcgtcgtcgtacccgccgaactccagctccgacgcgtcgcaccacgccgcgccgccgccgccgccgacgacgtcgaacacgccacccacattctgaccgccaccgccaccgtaagccatttcctgggcgtcgccgccgtgtgcgggctgagccggcgccggcagcgcggcggcggtctgggtgtcggcgccggcgccggcgccgtagtagtggcggtggaggtcgtcggcggagaggtcgggggagaggtagggcgtgagggaggagcccgggggcaggtccgggtaggcgaagttggtgcgcgcggcggcgccgcggatggtgcgggcggcgcggtcgtaggcgacggcggcctcctccgccgtgtcgaacgtgcccagccagtgccgctccttggtcgccgggtccctgatctccgccgcgtaccggccccacggccgccgcctcacgccgaggtatctcgcctcgttccctcctccacccccctcctgctcccgctgctgctgctgctgctgccgccgcctcgtcttcttctccggcgccggcgccgacgaggagaagaagtagaaatccat
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| CDS seq | atggatttctacttcttctcctcgtcggcgccggcgccggagaagaagacgaggcggcggcagcagcagcagcagcagcgggagcaggaggggggtggaggagggaacgaggcgagatacctcggcgtgaggcggcggccgtggggccggtacgcggcggagatcagggacccggcgaccaaggagcggcactggctgggcacgttcgacacggcggaggaggccgccgtcgcctacgaccgcgccgcccgcaccatccgcggcgccgccgcgcgcaccaacttcgcctacccggacctgcccccgggctcctccctcacgccctacctctcccccgacctctccgccgacgacctccaccgccactactacggcgccggcgccggcgccgacacccagaccgccgccgcgctgccggcgccggctcagcccgcacacggcggcgacgcccaggaaatggcttacggtggcggtggcggtcagaatgtgggtggcgtgttcgacgtcgtcggcggcggcggcggcgcggcgtggtgcgacgcgtcggagctggagttcggcgggtacgacgacgcgggcgcgtcggcggcggcggcggcggtgtacttcgaggaggggtacgtgcacagcccgatgttctcgccgatgcccgcggccgacgaggtcgccgccgacggcttccagctcggcgggtcgtcgtcctcctcgtattactactga
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| Protein seq | MDFYFFSSSAPAPEKKTRRRQQQQQQREQEGGGGGNEARYLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEEAAVAYDRAARTIRGAAARTNFAYPDLPPGSSLTPYLSPDLSADDLHRHYYGAGAGADTQTAAALPAPAQPAHGGDAQEMAYGGGGGQNVGGVFDVVGGGGGAAWCDASELEFGGYDDAGASAAAAAVYFEEGYVHSPMFSPMPAADEVAADGFQLGGSSSSSYYY |
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| Function | Ethylene-responsive transcription factor LEP [UniProtKB/Swiss-Prot:Q9M644] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0019050 | OsLiXu_02g0019050.01 | Chr02 | 20114719 | 20115438 | - | NAM | ||
| CDS seq | atggatttctacttcttctcctcgtcggcgccggcgccggagaagaagacgaggcggcggcagcagcagcagcagcagcgggagcaggaggggggtggaggagggaacgaggcgagatacctcggcgtgaggcggcggccgtggggccggtacgcggcggagatcagggacccggcgaccaaggagcggcactggctgggcacgttcgacacggcggaggaggccgccgtcgcctacgaccgcgccgcccgcaccatccgcggcgccgccgcgcgcaccaacttcgcctacccggacctgcccccgggctcctccctcacgccctacctctcccccgacctctccgccgacgacctccaccgccactactacggcgccggcgccggcgccgacacccagaccgccgccgcgctgccggcgccggctcagcccgcacacggcggcgacgcccaggaaatggcttacggtggcggtggcggtcagaatgtgggtggcgtgttcgacgtcgtcggcggcggcggcggcgcggcgtggtgcgacgcgtcggagctggagttcggcgggtacgacgacgcgggcgcgtcggcggcggcggcggcggtgtacttcgaggaggggtacgtgcacagcccgatgttctcgccgatgcccgcggccgacgaggtcgccgccgacggcttccagctcggcgggtcgtcgtcctcctcgtattactactga
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| Protein seq | MDFYFFSSSAPAPEKKTRRRQQQQQQREQEGGGGGNEARYLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEEAAVAYDRAARTIRGAAARTNFAYPDLPPGSSLTPYLSPDLSADDLHRHYYGAGAGADTQTAAALPAPAQPAHGGDAQEMAYGGGGGQNVGGVFDVVGGGGGAAWCDASELEFGGYDDAGASAAAAAVYFEEGYVHSPMFSPMPAADEVAADGFQLGGSSSSSYYY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0520000 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g32040 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0520000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0019140 | RBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0019260 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0019210 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0018980 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0018950 | RBH | 0.000000 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0314100 | RBH | 0 | 0.049765 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0018660 | RBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0334700 | SBH | 0.9621405 | 6.215902 | 0.032006 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0019190 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0018910 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0019330 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0012040 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0018860 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G019270 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0018970 | RBH | 0.0 | 5.290373 | 0.000000 |
