Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_02g0013310 | OGI:02031700 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr02:11501311-11503719 | ||||||||
| Gene Symbol | OsFbox083, OsFbox83, Os_F0360 | ||||||||||
| DNA seq | tcacacactgactgacgcgacacacgacgtacgtagtacagacggggaatgtgggcgtgtgctactgctacacaagttcctcttcctccgcctccactggcagcagctcgtcgtcgtccgtgcggcccagagcatggtgatgagctcgacgccctgcaccagcgccgcctcgtgcgccctggcgtgctcctccatgctcgacggcgccatgtacacgacgagctccacccacagtttggccaccatcttccacacggcggaggcatccttgtcggcttcgtctaacagcatcttccccagcacggcgcccttctggaccatcgtcaggcttgcggacgcgaaatccggcttgaacttgtcggcgatcttgtgcaccttgtcgcgccggctccgctccgacaacaagtagtagctccaccatgggccgccgaccgcctccttgatctgctccttcatgtcgccgtagacacgctccgtgccttcgctgtggtccggcaggagctccggcttgaaggcgacgaggtaagcgcagtacctggacagcctcgccgccgtcttggggttccgtcgttccttgttggccgtcgtctgctctgtggagacggagtgcggggtcctcgtctccaggagggtggtggcgatgtgccagacaaggatgaccttcgcgacgccgcgaccgctgctctcgcacgcccacgcgaaccgcgccgacagcgccgcccggccgttgctcaaagcaccgccgtctcggaagcgtttgaagatggaacgcttagctcgcctgggaagcttggcggtgggcagcgcgagggcggagaggccgccgccacatatcccaaggagggagagctgcttgatgttgatgttgctcgggtagcgcctgaattttctggagaggaagaggacgaagcgggcggcggcgggagattgagaagtgggcttgggggagtaggcgtggagcagcgagacggtgaaccagttggagacgaggaagacgaagatctcggacgcctcatcgtaggcgacggcgatgaagaggatgtagcagatggtgagatcgatgagggtgtagaaggccttggaagacgtggtgacgttcttcaagaggcacttgatcgtcttgacgactaggcctacggataggaccgagctgtcagtccatacgctgttgaaggcgtagaggatgccgccattgccgcagaggacgatggtcatgacgcagagggcgacgacgatgacggggaagaagacgtagttgacgaagaagaagtaggggctcgcgagcacgacggggaggacggagtggtagtactcggtgaggaaggtaacctcgtccttgagcacttggaacagggtcaccgctgctgcttctgctgggagtgggaggtcgtcgccaacgccattgttgttgttgttgttgttgttcttgttcttcttgttgcaggggcagagggcatcgaagatgatgctacggcactcggtggtctctggctcggttatgggcatgttctcgaggcggcggcgcagcagtttgaagagcgcaaaggagaggcagagcctcttgaggtttgggtggtggtgggtggcccagatcttgccgacggtgaggatgtcgtcggtttgggcgacggcgaggttgagctcgtagccgcccggtccgggcctgatcaccatgttctcttctcccatgacggcatacctgcactggtccaacgcggtggcggtggccgtggccgccatgtaggaggagattaggcgggggttcttgccgtgggcgaaagaacgcttggccatctcggtgatgacgacgcgctgcaccagcttggcggcgcagagcacccagaggacgccgaagatggccttcttgccggaggccttgacggtgaagaagacgaggttgcccatccagaggacgttgtaggcgtgggtgacgatggtggagtagctctgcgtccctctgccgatgatcacggcgccctccaccttccttcggaggagctcgacgaggagcatccatgtgaggatcacccgcgccagcagcgacagttccttgttgttgtcgctgtcgccggcggccggtttgctgctgctgcagtgggcgccgccattcttggcctcggacaagaagtaggacatgacggggacgaagaggttgagagagccggcgaggaagaagcggacggtggggttgagcacggcgctcacccgtgatatgcggctgaagaggttgaggtcgaagaagcccgcggcgaagatgaagatgagcgcggagatgcccaccaccgatgcctggtcgccattctcgccgtagatggctgtcatgttatacacgaattccaccatattgttatctgtacactgtgcaaacaccacactactattgctgattatcgaaatattgaatgccat
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| CDS seq | atggcattcaatatttcgataatcagcaatagtagtgtggtgtttgcacagtgtacagataacaatatggtggaattcgtgtataacatgacagccatctacggcgagaatggcgaccaggcatcggtggtgggcatctccgcgctcatcttcatcttcgccgcgggcttcttcgacctcaacctcttcagccgcatatcacgggtgagcgccgtgctcaaccccaccgtccgcttcttcctcgccggctctctcaacctcttcgtccccgtcatgtcctacttcttgtccgaggccaagaatggcggcgcccactgcagcagcagcaaaccggccgccggcgacagcgacaacaacaaggaactgtcgctgctggcgcgggtgatcctcacatggatgctcctcgtcgagctcctccgaaggaaggtggagggcgccgtgatcatcggcagagggacgcagagctactccaccatcgtcacccacgcctacaacgtcctctggatgggcaacctcgtcttcttcaccgtcaaggcctccggcaagaaggccatcttcggcgtcctctgggtgctctgcgccgccaagctggtgcagcgcgtcgtcatcaccgagatggccaagcgttctttcgcccacggcaagaacccccgcctaatctcctcctacatggcggccacggccaccgccaccgcgttggaccagtgcaggtatgccgtcatgggagaagagaacatggtgatcaggcccggaccgggcggctacgagctcaacctcgccgtcgcccaaaccgacgacatcctcaccgtcggcaagatctgggccacccaccaccacccaaacctcaagaggctctgcctctcctttgcgctcttcaaactgctgcgccgccgcctcgagaacatgcccataaccgagccagagaccaccgagtgccgtagcatcatcttcgatgccctctgcccctgcaacaagaagaacaagaacaacaacaacaacaacaacaatggcgttggcgacgacctcccactcccagcagaagcagcagcggtgaccctgttccaagtgctcaaggacgaggttaccttcctcaccgagtactaccactccgtcctccccgtcgtgctcgcgagcccctacttcttcttcgtcaactacgtcttcttccccgtcatcgtcgtcgccctctgcgtcatgaccatcgtcctctgcggcaatggcggcatcctctacgccttcaacagcgtatggactgacagctcggtcctatccgtaggcctagtcgtcaagacgatcaagtgcctcttgaagaacgtcaccacgtcttccaaggccttctacaccctcatcgatctcaccatctgctacatcctcttcatcgccgtcgcctacgatgaggcgtccgagatcttcgtcttcctcgtctccaactggttcaccgtctcgctgctccacgcctactcccccaagcccacttctcaatctcccgccgccgcccgcttcgtcctcttcctctccagaaaattcaggcgctacccgagcaacatcaacatcaagcagctctccctccttgggatatgtggcggcggcctctccgccctcgcgctgcccaccgccaagcttcccaggcgagctaagcgttccatcttcaaacgcttccgagacggcggtgctttgagcaacggccgggcggcgctgtcggcgcggttcgcgtgggcgtgcgagagcagcggtcgcggcgtcgcgaaggtcatccttgtctggcacatcgccaccaccctcctggagacgaggaccccgcactccgtctccacagagcagacgacggccaacaaggaacgacggaaccccaagacggcggcgaggctgtccaggtactgcgcttacctcgtcgccttcaagccggagctcctgccggaccacagcgaaggcacggagcgtgtctacggcgacatgaaggagcagatcaaggaggcggtcggcggcccatggtggagctactacttgttgtcggagcggagccggcgcgacaaggtgcacaagatcgccgacaagttcaagccggatttcgcgtccgcaagcctgacgatggtccagaagggcgccgtgctggggaagatgctgttagacgaagccgacaaggatgcctccgccgtgtggaagatggtggccaaactgtgggtggagctcgtcgtgtacatggcgccgtcgagcatggaggagcacgccagggcgcacgaggcggcgctggtgcagggcgtcgagctcatcaccatgctctgggccgcacggacgacgacgagctgctgccagtggaggcggaggaagaggaacttgtgtagcagtagcacacgcccacattccccgtctgtactacgtacgtcgtgtgtcgcgtcagtcagtgtgtga
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| Protein seq | MAFNISIISNSSVVFAQCTDNNMVEFVYNMTAIYGENGDQASVVGISALIFIFAAGFFDLNLFSRISRVSAVLNPTVRFFLAGSLNLFVPVMSYFLSEAKNGGAHCSSSKPAAGDSDNNKELSLLARVILTWMLLVELLRRKVEGAVIIGRGTQSYSTIVTHAYNVLWMGNLVFFTVKASGKKAIFGVLWVLCAAKLVQRVVITEMAKRSFAHGKNPRLISSYMAATATATALDQCRYAVMGEENMVIRPGPGGYELNLAVAQTDDILTVGKIWATHHHPNLKRLCLSFALFKLLRRRLENMPITEPETTECRSIIFDALCPCNKKNKNNNNNNNNGVGDDLPLPAEAAAVTLFQVLKDEVTFLTEYYHSVLPVVLASPYFFFVNYVFFPVIVVALCVMTIVLCGNGGILYAFNSVWTDSSVLSVGLVVKTIKCLLKNVTTSSKAFYTLIDLTICYILFIAVAYDEASEIFVFLVSNWFTVSLLHAYSPKPTSQSPAAARFVLFLSRKFRRYPSNINIKQLSLLGICGGGLSALALPTAKLPRRAKRSIFKRFRDGGALSNGRAALSARFAWACESSGRGVAKVILVWHIATTLLETRTPHSVSTEQTTANKERRNPKTAARLSRYCAYLVAFKPELLPDHSEGTERVYGDMKEQIKEAVGGPWWSYYLLSERSRRDKVHKIADKFKPDFASASLTMVQKGAVLGKMLLDEADKDASAVWKMVAKLWVELVVYMAPSSMEEHARAHEAALVQGVELITMLWAARTTTSCCQWRRRKRNLCSSSTRPHSPSVLRTSCVASVSV |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0013310 | OsLiXu_02g0013310.01 | Chr02 | 11501311 | 11503719 | - | NAM | ||
| CDS seq | atggcattcaatatttcgataatcagcaatagtagtgtggtgtttgcacagtgtacagataacaatatggtggaattcgtgtataacatgacagccatctacggcgagaatggcgaccaggcatcggtggtgggcatctccgcgctcatcttcatcttcgccgcgggcttcttcgacctcaacctcttcagccgcatatcacgggtgagcgccgtgctcaaccccaccgtccgcttcttcctcgccggctctctcaacctcttcgtccccgtcatgtcctacttcttgtccgaggccaagaatggcggcgcccactgcagcagcagcaaaccggccgccggcgacagcgacaacaacaaggaactgtcgctgctggcgcgggtgatcctcacatggatgctcctcgtcgagctcctccgaaggaaggtggagggcgccgtgatcatcggcagagggacgcagagctactccaccatcgtcacccacgcctacaacgtcctctggatgggcaacctcgtcttcttcaccgtcaaggcctccggcaagaaggccatcttcggcgtcctctgggtgctctgcgccgccaagctggtgcagcgcgtcgtcatcaccgagatggccaagcgttctttcgcccacggcaagaacccccgcctaatctcctcctacatggcggccacggccaccgccaccgcgttggaccagtgcaggtatgccgtcatgggagaagagaacatggtgatcaggcccggaccgggcggctacgagctcaacctcgccgtcgcccaaaccgacgacatcctcaccgtcggcaagatctgggccacccaccaccacccaaacctcaagaggctctgcctctcctttgcgctcttcaaactgctgcgccgccgcctcgagaacatgcccataaccgagccagagaccaccgagtgccgtagcatcatcttcgatgccctctgcccctgcaacaagaagaacaagaacaacaacaacaacaacaacaatggcgttggcgacgacctcccactcccagcagaagcagcagcggtgaccctgttccaagtgctcaaggacgaggttaccttcctcaccgagtactaccactccgtcctccccgtcgtgctcgcgagcccctacttcttcttcgtcaactacgtcttcttccccgtcatcgtcgtcgccctctgcgtcatgaccatcgtcctctgcggcaatggcggcatcctctacgccttcaacagcgtatggactgacagctcggtcctatccgtaggcctagtcgtcaagacgatcaagtgcctcttgaagaacgtcaccacgtcttccaaggccttctacaccctcatcgatctcaccatctgctacatcctcttcatcgccgtcgcctacgatgaggcgtccgagatcttcgtcttcctcgtctccaactggttcaccgtctcgctgctccacgcctactcccccaagcccacttctcaatctcccgccgccgcccgcttcgtcctcttcctctccagaaaattcaggcgctacccgagcaacatcaacatcaagcagctctccctccttgggatatgtggcggcggcctctccgccctcgcgctgcccaccgccaagcttcccaggcgagctaagcgttccatcttcaaacgcttccgagacggcggtgctttgagcaacggccgggcggcgctgtcggcgcggttcgcgtgggcgtgcgagagcagcggtcgcggcgtcgcgaaggtcatccttgtctggcacatcgccaccaccctcctggagacgaggaccccgcactccgtctccacagagcagacgacggccaacaaggaacgacggaaccccaagacggcggcgaggctgtccaggtactgcgcttacctcgtcgccttcaagccggagctcctgccggaccacagcgaaggcacggagcgtgtctacggcgacatgaaggagcagatcaaggaggcggtcggcggcccatggtggagctactacttgttgtcggagcggagccggcgcgacaaggtgcacaagatcgccgacaagttcaagccggatttcgcgtccgcaagcctgacgatggtccagaagggcgccgtgctggggaagatgctgttagacgaagccgacaaggatgcctccgccgtgtggaagatggtggccaaactgtgggtggagctcgtcgtgtacatggcgccgtcgagcatggaggagcacgccagggcgcacgaggcggcgctggtgcagggcgtcgagctcatcaccatgctctgggccgcacggacgacgacgagctgctgccagtggaggcggaggaagaggaacttgtgtagcagtagcacacgcccacattccccgtctgtactacgtacgtcgtgtgtcgcgtcagtcagtgtgtga
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| Protein seq | MAFNISIISNSSVVFAQCTDNNMVEFVYNMTAIYGENGDQASVVGISALIFIFAAGFFDLNLFSRISRVSAVLNPTVRFFLAGSLNLFVPVMSYFLSEAKNGGAHCSSSKPAAGDSDNNKELSLLARVILTWMLLVELLRRKVEGAVIIGRGTQSYSTIVTHAYNVLWMGNLVFFTVKASGKKAIFGVLWVLCAAKLVQRVVITEMAKRSFAHGKNPRLISSYMAATATATALDQCRYAVMGEENMVIRPGPGGYELNLAVAQTDDILTVGKIWATHHHPNLKRLCLSFALFKLLRRRLENMPITEPETTECRSIIFDALCPCNKKNKNNNNNNNNGVGDDLPLPAEAAAVTLFQVLKDEVTFLTEYYHSVLPVVLASPYFFFVNYVFFPVIVVALCVMTIVLCGNGGILYAFNSVWTDSSVLSVGLVVKTIKCLLKNVTTSSKAFYTLIDLTICYILFIAVAYDEASEIFVFLVSNWFTVSLLHAYSPKPTSQSPAAARFVLFLSRKFRRYPSNINIKQLSLLGICGGGLSALALPTAKLPRRAKRSIFKRFRDGGALSNGRAALSARFAWACESSGRGVAKVILVWHIATTLLETRTPHSVSTEQTTANKERRNPKTAARLSRYCAYLVAFKPELLPDHSEGTERVYGDMKEQIKEAVGGPWWSYYLLSERSRRDKVHKIADKFKPDFASASLTMVQKGAVLGKMLLDEADKDASAVWKMVAKLWVELVVYMAPSSMEEHARAHEAALVQGVELITMLWAARTTTSCCQWRRRKRNLCSSSTRPHSPSVLRTSCVASVSV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0297200 | SBH | 0.099488 | 0.101352 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g19470 | SBH | 0.061331 | 0.062141 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0297200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0020500 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0020600 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0020570 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0001430 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0013070 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0179800 | RBH | 0.748626 | 0.064923 | 0.0237865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0012870 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0192500 | RBH | 0.0777675 | 0.283193 | 0.030776 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0013430 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0012970 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0013480 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0001420 | SBH | 0.357066 | 0.0 | 0.198200 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0013120 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G013460 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0013230 | RBH | 0.153355 | 0.0 | 0.0 |
