Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_01g0029620 | OGI:01087360 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr01:30519232-30520597 | ||||||||
| Gene Symbol | STE11, OsSTE11, OsMAPKKK55 | ||||||||||
| DNA seq | ggcaaatatcactaaatatcacacgaaaaccaaaccaaatcgaagaaagagagatactgctgtacttggagccaagcgagagagaagactgagacgcgacacgcgagcaatggaggctgcggtcgacggcaggtggacacgcgtccgcacgctcggccgcggcgcgtccggcgccgtggtgtccctcgccgcagacgaccgctcgggcgcgctcttcgcggtcaagtcggcggcggcggcggcggcggccgagcagctcgtgcgcgaggggcgcatcctttccgggctgcgctcgccgcacgtcctcccctgccttggcttccgcgccgaagccggcggcgagtgccagctattcctcgagttcgcgcccggcggctcgctcgccgacgtggtggcgaggagtggcgggcggctcgacgagtgcgccatccgcgcgtacgcggcggacgtggcgaggggcctggcgtacctccacgggatgtcgctcgtgcacggcgacgtcaaggggaggaacgtggtggtcggcgccgacggccgggccaagatcgcggatttcgggtgcgccaggacggtgggctccgacaggccaatcggcggcacgccggcgttcatggcgccagaggtggcgcgcggggaagagcaggagccggccgccgatgtctgggccctgggctgcaccgtcatcgagatggccaccggccgcgctccgtggagcgacatggaagacatcctctcggcggtgcgccggattggctacacggacgccgtgccggaggtgcccgagtggctgtccgcagaggcgaaggacttcttggcccgctgcttcgcgagaaacccacgcgagcggtggacatcgtcgcagctcctggagcacccgttcctggcatcggcaggctgcagcgtgaaaacaggggaggcggcgccccaatgggtgtcccccaagagcacgctggatgcggcgttctgggagtcggacacggacgacgaggaagacgacatgccagcgagccccgccgagaggatcaaagcattggcttgcccctgctcggccttgccggattgggactccgacgagggctggatccaagtgctcaacgagtccagcgaagcttgcgacacggcagtggccaaggtggaggccgaagggaaGgggcgcgttctgatcgaagcgttggaaacgatcaacgaatcttccggtggcgatgcagagtgtgttgatcccgagtgcactgtacgattgattactgttgcttccattgggcagcaggaagtgttctgcttgggtctcattaatgacccacttgtattttctgttaataaaagtgaattaacaaagtctttgtttccccaaattgtctcattttaa
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| CDS seq | atggaggctgcggtcgacggcaggtggacacgcgtccgcacgctcggccgcggcgcgtccggcgccgtggtgtccctcgccgcagacgaccgctcgggcgcgctcttcgcggtcaagtcggcggcggcggcggcggcggccgagcagctcgtgcgcgaggggcgcatcctttccgggctgcgctcgccgcacgtcctcccctgccttggcttccgcgccgaagccggcggcgagtgccagctattcctcgagttcgcgcccggcggctcgctcgccgacgtggtggcgaggagtggcgggcggctcgacgagtgcgccatccgcgcgtacgcggcggacgtggcgaggggcctggcgtacctccacgggatgtcgctcgtgcacggcgacgtcaaggggaggaacgtggtggtcggcgccgacggccgggccaagatcgcggatttcgggtgcgccaggacggtgggctccgacaggccaatcggcggcacgccggcgttcatggcgccagaggtggcgcgcggggaagagcaggagccggccgccgatgtctgggccctgggctgcaccgtcatcgagatggccaccggccgcgctccgtggagcgacatggaagacatcctctcggcggtgcgccggattggctacacggacgccgtgccggaggtgcccgagtggctgtccgcagaggcgaaggacttcttggcccgctgcttcgcgagaaacccacgcgagcggtggacatcgtcgcagctcctggagcacccgttcctggcatcggcaggctgcagcgtgaaaacaggggaggcggcgccccaatgggtgtcccccaagagcacgctggatgcggcgttctgggagtcggacacggacgacgaggaagacgacatgccagcgagccccgccgagaggatcaaagcattggcttgcccctgctcggccttgccggattgggactccgacgagggctggatccaagtgctcaacgagtccagcgaagcttgcgacacggcagtggccaaggtggaggccgaagggaaGgggcgcgttctgatcgaagcgttggaaacgatcaacgaatcttccggtggcgatgcagagtgtgttgatcccgagtgcactgtacgattgattactgttgcttccattgggcagcaggaagtgttctgcttgggtctcattaatgacccacttgtattttctgttaataaaagtgaattaacaaagtctttgtttccccaaattgtctcattttaa
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| Protein seq | MEAAVDGRWTRVRTLGRGASGAVVSLAADDRSGALFAVKSAAAAAAAEQLVREGRILSGLRSPHVLPCLGFRAEAGGECQLFLEFAPGGSLADVVARSGGRLDECAIRAYAADVARGLAYLHGMSLVHGDVKGRNVVVGADGRAKIADFGCARTVGSDRPIGGTPAFMAPEVARGEEQEPAADVWALGCTVIEMATGRAPWSDMEDILSAVRRIGYTDAVPEVPEWLSAEAKDFLARCFARNPRERWTSSQLLEHPFLASAGCSVKTGEAAPQWVSPKSTLDAAFWESDTDDEEDDMPASPAERIKALACPCSALPDWDSDEGWIQVLNESSEACDTAVAKVEAEGKGRVLIEALETINESSGGDAECVDPECTVRLITVASIGQQEVFCLGLINDPLVFSVNKSELTKSLFPQIVSF |
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| Function | Mitogen-activated protein kinase kinase kinase 17 [UniProtKB/Swiss-Prot:O80888] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_01g0029620 | OsLiXu_01g0029620.01 | Chr01 | 30519232 | 30520597 | + | NAM | ||
| CDS seq | atggaggctgcggtcgacggcaggtggacacgcgtccgcacgctcggccgcggcgcgtccggcgccgtggtgtccctcgccgcagacgaccgctcgggcgcgctcttcgcggtcaagtcggcggcggcggcggcggcggccgagcagctcgtgcgcgaggggcgcatcctttccgggctgcgctcgccgcacgtcctcccctgccttggcttccgcgccgaagccggcggcgagtgccagctattcctcgagttcgcgcccggcggctcgctcgccgacgtggtggcgaggagtggcgggcggctcgacgagtgcgccatccgcgcgtacgcggcggacgtggcgaggggcctggcgtacctccacgggatgtcgctcgtgcacggcgacgtcaaggggaggaacgtggtggtcggcgccgacggccgggccaagatcgcggatttcgggtgcgccaggacggtgggctccgacaggccaatcggcggcacgccggcgttcatggcgccagaggtggcgcgcggggaagagcaggagccggccgccgatgtctgggccctgggctgcaccgtcatcgagatggccaccggccgcgctccgtggagcgacatggaagacatcctctcggcggtgcgccggattggctacacggacgccgtgccggaggtgcccgagtggctgtccgcagaggcgaaggacttcttggcccgctgcttcgcgagaaacccacgcgagcggtggacatcgtcgcagctcctggagcacccgttcctggcatcggcaggctgcagcgtgaaaacaggggaggcggcgccccaatgggtgtcccccaagagcacgctggatgcggcgttctgggagtcggacacggacgacgaggaagacgacatgccagcgagccccgccgagaggatcaaagcattggcttgcccctgctcggccttgccggattgggactccgacgagggctggatccaagtgctcaacgagtccagcgaagcttgcgacacggcagtggccaaggtggaggccgaagggaaGgggcgcgttctgatcgaagcgttggaaacgatcaacgaatcttccggtggcgatgcagagtgtgttgatcccgagtgcactgtacgattgattactgttgcttccattgggcagcaggaagtgttctgcttgggtctcattaatgacccacttgtattttctgttaataaaagtgaattaacaaagtctttgtttccccaaattgtctcattttaa
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| Protein seq | MEAAVDGRWTRVRTLGRGASGAVVSLAADDRSGALFAVKSAAAAAAAEQLVREGRILSGLRSPHVLPCLGFRAEAGGECQLFLEFAPGGSLADVVARSGGRLDECAIRAYAADVARGLAYLHGMSLVHGDVKGRNVVVGADGRAKIADFGCARTVGSDRPIGGTPAFMAPEVARGEEQEPAADVWALGCTVIEMATGRAPWSDMEDILSAVRRIGYTDAVPEVPEWLSAEAKDFLARCFARNPRERWTSSQLLEHPFLASAGCSVKTGEAAPQWVSPKSTLDAAFWESDTDDEEDDMPASPAERIKALACPCSALPDWDSDEGWIQVLNESSEACDTAVAKVEAEGKGRVLIEALETINESSGGDAECVDPECTVRLITVASIGQQEVFCLGLINDPLVFSVNKSELTKSLFPQIVSF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.174763 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0699400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g50400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0699400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0030360 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0029980 | RBH | 0.0 | 0.0 | 0.505103 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0030330 | RBH | 0.0 | 0.0 | 0.948532 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0029600 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0029270 | RBH | 0.532222 | 0.0 | 0.899570 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0480500 | RBH | 0.5800815 | 13.0102045 | 74.0613865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0029000 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0471000 | RBH | 4.415892 | 11.22685 | 0.5145035 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0029250 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0029190 | RBH | 0.132203 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0029450 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0025370 | SBH | 0.061484 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0029430 | RBH | 0.0 | 1.015128 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G029860 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0029550 | RBH | 0.0 | 0.0 | 0.560920 |
