Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLiXu_01g0016530 | OGI:01047490 | 12/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr01:15195403-15195881 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | tggcggcgcataggcagcggcgtgccggtgcatgggaaagcaagcccgcccactccgtcctcggatcagcaagtgtaagcctatccactctgtgtctccatccttgtagcatgtcgatcttatgccagatctgaaatattggtgttcttagtatgtgtatgcatatttcttatgctagatctgaagaaatgtcaactccgggaactagctcatcacctgctggaggtgctgttgctgtgacctctcctacgccttcaccctctccttccctagcaccagtcacaacacccaacactaactctaaagatactaatgtgatagagatagatgatgatgttgcagtagggaacaaaagaaaactaaaatatgctatttggcaagaatttggacaagtaaaggtcggaaatgtgtggaaagctaaatgtagttggtgtcaaaaattgctctctggtgagacaaagaaatgggaaaacacttaa
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CDS seq | atgtcaactccgggaactagctcatcacctgctggaggtgctgttgctgtgacctctcctacgccttcaccctctccttccctagcaccagtcacaacacccaacactaactctaaagatactaatgtgatagagatagatgatgatgttgcagtagggaacaaaagaaaactaaaatatgctatttggcaagaatttggacaagtaaaggtcggaaatgtgtggaaagctaaatgtagttggtgtcaaaaattgctctctggtgagacaaagaaatgggaaaacacttaa |
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Protein seq | MSTPGTSSSPAGGAVAVTSPTPSPSPSLAPVTTPNTNSKDTNVIEIDDDVAVGNKRKLKYAIWQEFGQVKVGNVWKAKCSWCQKLLSGETKKWENT |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLiXu_01g0016530 | OsLiXu_01g0016530.01 | Chr01 | 15195403 | 15195881 | + | NAM | ||
CDS seq | atgtcaactccgggaactagctcatcacctgctggaggtgctgttgctgtgacctctcctacgccttcaccctctccttccctagcaccagtcacaacacccaacactaactctaaagatactaatgtgatagagatagatgatgatgttgcagtagggaacaaaagaaaactaaaatatgctatttggcaagaatttggacaagtaaaggtcggaaatgtgtggaaagctaaatgtagttggtgtcaaaaattgctctctggtgagacaaagaaatgggaaaacacttaa
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Protein seq | MSTPGTSSSPAGGAVAVTSPTPSPSPSLAPVTTPNTNSKDTNVIEIDDDVAVGNKRKLKYAIWQEFGQVKVGNVWKAKCSWCQKLLSGETKKWENT |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
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Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g27030 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0017160 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0016840 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0017100 | RBH | 5.006116 | 4.519813 | 19.022572 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0016480 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0016530 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0255800 | RBH | 0 | 0 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0016510 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0016760 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G016830 | RBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0016600 | RBH | 0.0 | 0.0 | 0.0 |