Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_01g0013940 | OGI:01035000 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr01:11773002-11777917 | ||||||||
| Gene Symbol | RLCK31, OsRLCK31 | ||||||||||
| DNA seq | ttttcttcaccttcccaatctaacatggagtactgccttaacccaaactctcccaattcccctcttcaaacaactacgccgcctccatgagctccatcacggtgcttcgctggtgctggcgccttgttctccgctcttccccttgtcttcctcgcgctctatccttcaccaccgcctccgacaaccctatgctgcctctacaggcgacttctccatctccggcatccttctcgccaggcggacggacggttggtttgcttatggaaggtggatttgttggtgagtgagtgaccatgcagtggaggcatcctccgcgggggctaaggtgaggcagattcgccggggacatggagtcatgcgtctgcgcgtgcgcgtggccaactgcgcctaccgtggtggcactcttcgccaccggttatgaagaaggggtggctgaggcgcctcatgatgtcgatcccatggtgagacatcagaccggaataccatctctagagcagcagaaaattgttagaaatctgatgtcttagagagaacaagtctagtgctatgataaacgtggcagaagtaacacttacgaatcaactgttgcatgcattcttaacattcttcattatatgctacactaaacatgaacagtcagtcatgttatccatgtctgcgagttcagtttggcattgcatataacctttctttcagatgctagattaatcagttacaagtaaactaactaactttacttggccttgtttatgcagagggaggccacctgttgctttccaatttttctgctgggtcacgcatgaatagccaagacaataatcttaaaaatttctttcagacaaatgggcatgtggtttttcaaagagtggagaacaactgtagcctaagatattttacggaaaatgagatatggcaaatcacccgtggttatagcattttactgggaaaaggttcattcggtaaagtctacaaaggaatgctggatggtcgatgccctgttgctgtgaagcgatacatacatggaacccggaaagaggagtttgccaaggaggtgatagtacattctcaaataaatcacaagaatgttgttcgacttttgggctgctgcacggaggaaaatgctctaatgatcgttatggagtttatctgtaatgggaacctgaatgatatccttcattgcagcaacacaaatggacgtgttcctttctctttgggcaaacgtttagacattgccattgaggttgctgaagtgctctggtgcatgcattcaatgtataatcccgttctccatggtgacatcaaacctgctaatatacttgtggatgaaaatctttcaccaaagctatctgattttggaatagcaagattgctttgtgctaatggggctcaacatactaacaatatcattggatctataggttatgttgatcctgcattctgcatgaatggaattctaaccccaaagagtgatgtttacagctttggagtggttttgctggaaatcatcaccagaaaaaaagcagtggatgggaccatcacccttgctcagcgtttcactgatgccgttgaacaagggaagaaggtgatgcatttgtttgacgaggacatcaacaatacaaaaaacatgaacttcctcgaagatattggcaagttagcagttaaatgcttgaggagggaggttgaagtgcgtcctgaaatggttgaagtagcaactagtctaagaatgattaggaaagctctagaggaagaagagggaaatctgattcagcagaacataagtgcaccaagcaactcaattccttcaaagaatgtgaagtcatcagcacagcaatttggcaatctaaaaatctttaaacaagaggaaattaagcttatgacaaaaaactacagcatgaaatttagggaagagttctgtgaacggctgtacaatggagtcattggcacaacacatgcagttatagtaaagcaagtgagaacatcttcagaaagtgacagaatgatgtttctgaagactatgagcatactgtctcagaagtatcacaaaaatattgccaatgttgctggcttccacttaggggattccatttcagagtgtgtgtatgaatcttgctgtgatttatcccggggaaatgacggccatgtttgcttctgtaaccgaaacctttatgacattatctgcaccagggaaaaactcccccttcatctacgtttatcaatagccgtccagtgtgcagagggcctggttcatatccattcattgttagctgaaaatcctgattcacattctacaggcctcttgggaaacttcaggtcgatcaatatttttctggacaagaacttcgtgccaaaagtcttcaattctaatctatcaacatttcttgggctttcagtcatgcagaaacataccgcctctgtcgatcgtcctaatgaccaaagatcacaaatatattatttagatggaagggatatttctggtcagctgttcaatcccaagtctgatgtttatagctttggagctgttcttttggaactcatcacttggaagacagtgagatacatgtctagtggaagagttcacatgcttaccAaagacttccttgatacttatagaatagaccatagtgcagcgatatcttttggcaagaaggtttatgatgagcaaggtaagtgttttattcacgaggcaattgctattggagttgagtgcttacaactgatgtccagacgcggccagaaatgagtgatgttctttcacgtcttcggaccatctctgcagctcagagtattagaagcaaactcatcatggctacacaaacaaaaggttgcacctcttagaccaataaatttgcacatttatcacatggaacatagtgcagtcaaacttctaagattttaaccactattgtatgaaaaaaatgccttacaaaatactacctttgcagcctttgtaattgtaattcaactacaagtttctcacacattgtattgctaatagctacaaaaccatggtgtgatatgaaagcaacttgaaatacaaatctaatggtaccattttaatatgactaggcatatatgtaacttgactaacggtAaaaacttacaaattttgaagtgtctacatggcttacaaaatcgaacagatgggtacctccattatacattttgtttttagtttttttacttgtacattattactccctttggtttcaaatttactcaaattaaaatggacaatgaattctgtcatagaaaaaccagtcacatttagcggtgatgttctttaagatgtattattctcatatcaaattttcaggtatagcaatactcattttaatcgaaattatgatagatgaatttaaatgtgcaccttgtttgcaaaaatataaatattattgtgctaagtacttaagtagcactccctctagccacaaatacttggacgttttagatacgatccagtcaaaattttaaaactttgatgtttaaaagttttattttaaaaacattaaaatgacatgtgtagatttgtctggttgtccagaaaggtacttccataatctcataaacttgtattttactacctccattcctAaaaaaattcctttttagctataaacctagactgtgttgtccatgtttatagctaaaaaggcactctttagaaagggaggtagcataaaattattgttaagagatgcactttaaagacattaaaaaaggtcaattttcaaatgtcaagtatcttttactggatggagtacaactaacaaaatacgaattttgtaagcagcaattaacttaatctattggattttattcttttggtttctccaatacagctagtggtgacaacaaaccaaaccaacatgtagcccctcctcttaccaagaagtttgtcaaaactccaccaactattgtattgatcattcccctgaacatattggagaagataactagcaacttcagtaatgatgccctaataggagagggcccagacgccagagttttctttggagagcttagtgatgggcagaaatctgcaataaagaagcttgatcctaatgAaaaaattgtagtgcaggtcatggatgcatgtcttgcctttcaccttttgagttgatgctctttattcatgagtacttgaagcaagggaatgccttctcaattccatgtgtcttgcaggttttgaccatttcaagaatgttgaagcatgacaacattgtccaaattcttggatattttattgaaggggaaaatcgtgttcttgcttatgagtatgcaccaaagggttccttgcacgatattcttcatggtaaggaataacaaaagatttttactctgacatattcctatcttgcttgcttactgtattatgatcaatagctgaaataatatgatttttttactacattactttatgtgttgaattgcttgttgcattactcaagagggtgtcagaggagcccagccaggaacacctctatcatgggagcagcgagtAaaaattgctctaagtgctgcaaaagggcttgagttcctccacgagaaggctgtgcctcctgtcatccacaccaacatcaggtccaacaacatatttatctttggcaatgatgttgcaaaaataggtgacctcggcgtctccaagcagctttatcccgaaagtgataatgactactacaatacccgactatatcctctgcgcagttttggctatgatgcaattgcaccagagtatgcaatgaaagatttccatgcttgagtttcttacagtactagtgcctaagcttggatatgatatgcattatcctactgatatgttctttccttcgttggttcttgttaggtgtaggaggacaggacagtacagtgtaaagagcgatatctacgctttggggctgtactgttggagcttttaa
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| CDS seq | atggagtcatgcgtctgcgcgtgcgcgtggccaactgcgcctaccgtggtggcactcttcgccaccggttatgaagaaggggtggctgaggcgcctcatgatgtcgatcccatgacaaatgggcatgtggtttttcaaagagtggagaacaactgtagcctaagatattttacggaaaatgagatatggcaaatcacccgtggttatagcattttactgggaaaaggttcattcggtaaagtctacaaaggaatgctggatggtcgatgccctgttgctgtgaagcgatacatacatggaacccggaaagaggagtttgccaaggaggtgatagtacattctcaaataaatcacaagaatgttgttcgacttttgggctgctgcacggaggaaaatgctctaatgatcgttatggagtttatctgtaatgggaacctgaatgatatccttcattgcagcaacacaaatggacgtgttcctttctctttgggcaaacgtttagacattgccattgaggttgctgaagtgctctggtgcatgcattcaatgtataatcccgttctccatggtgacatcaaacctgctaatatacttgtggatgaaaatctttcaccaaagctatctgattttggaatagcaagattgctttgtgctaatggggctcaacatactaacaatatcattggatctataggttatgttgatcctgcattctgcatgaatggaattctaaccccaaagagtgatgtttacagctttggagtggttttgctggaaatcatcaccagaaaaaaagcagtggatgggaccatcacccttgctcagcgtttcactgatgccgttgaacaagggaagaaggtgatgcatttgtttgacgaggacatcaacaatacaaaaaacatgaacttcctcgaagatattggcaagttagcagttaaatgcttgaggagggaggttgaagtgcgtcctgaaatggttgaagtagcaactagtctaagaatgattaggaaagctctagaggaagaagagggaaatctgattcagcagaacataagtgcaccaagcaactcaattccttcaaagaatgtgaagtcatcagcacagcaatttggcaatctaaaaatctttaaacaagaggaaattaagcttatgacaaaaaactacagcatgaaatttagggaagagttctgtgaacggctgtacaatggagtcattggcacaacacatgcagttatagtaaagcaagtgagaacatcttcagaaagtgacagaatgatgtttctgaagactatgagcatactgtctcagaagtatcacaaaaatattgccaatgttgctggcttccacttaggggattccatttcagagtgtgtgtatgaatcttgctgtgatttatcccggggaaatgacggccatgtttgcttctgtaaccgaaacctttatgacattatctgcaccagggaaaaactcccccttcatctacgtttatcaatagccgtccagtgtgcagagggcctggttcatatccattcattgttagctgaaaatcctgattcacattctacaggcctcttgggaaacttcaggtcgatcaatatttttctggacaagaacttcgtgccaaaagtcttcaattctaatctatcaacatttcttgggctttcagtcatgcagaaacataccgcctctgtcgatcgtcctaatgaccaaagatcacaaatatattatttagatggaagggatatttctggtcagctgttcaatcccaagtctgatgtttatagctttggagctgttcttttggaactcatcacttggaagacagtgagatacatgtctagtggaagagttcacatgcttaccAaagacttccttgatacttatagaatagaccatagtgcagcgatatcttttggcaagaaggtttatgatgagcaagctagtggtgacaacaaaccaaaccaacatgtagcccctcctcttaccaagaagtttgtcaaaactccaccaactattgtattgatcattcccctgaacatattggagaagataactagcaacttcagtaatgatgccctaataggagagggcccagacgccagagttttctttggagagcttagtgatgggcagaaatctgcaataaagaagcttgatcctaatgAaaaaattgtagtgcaggttttgaccatttcaagaatgttgaagcatgacaacattgtccaaattcttggatattttattgaaggggaaaatcgtgttcttgcttatgagtatgcaccaaagggttccttgcacgatattcttcatgagggtgtcagaggagcccagccaggaacacctctatcatgggagcagcgagtAaaaattgctctaagtgctgcaaaagggcttgagttcctccacgagaaggctgtgcctcctgtcatccacaccaacatcaggtccaacaacatatttatctttggcaatgatgttgcaaaaataggtgacctcggcgtctccaagcagctttatcccgaaagtgataatgactactacaatacccgactatatcctctgcgcagttttggctatgatgcaattgcaccagagtgtaggaggacaggacagtacagtgtaaagagcgatatctacgctttggggctgtactgttggagcttttaa
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| Protein seq | MESCVCACAWPTAPTVVALFATGYEEGVAEAPHDVDPMTNGHVVFQRVENNCSLRYFTENEIWQITRGYSILLGKGSFGKVYKGMLDGRCPVAVKRYIHGTRKEEFAKEVIVHSQINHKNVVRLLGCCTEENALMIVMEFICNGNLNDILHCSNTNGRVPFSLGKRLDIAIEVAEVLWCMHSMYNPVLHGDIKPANILVDENLSPKLSDFGIARLLCANGAQHTNNIIGSIGYVDPAFCMNGILTPKSDVYSFGVVLLEIITRKKAVDGTITLAQRFTDAVEQGKKVMHLFDEDINNTKNMNFLEDIGKLAVKCLRREVEVRPEMVEVATSLRMIRKALEEEEGNLIQQNISAPSNSIPSKNVKSSAQQFGNLKIFKQEEIKLMTKNYSMKFREEFCERLYNGVIGTTHAVIVKQVRTSSESDRMMFLKTMSILSQKYHKNIANVAGFHLGDSISECVYESCCDLSRGNDGHVCFCNRNLYDIICTREKLPLHLRLSIAVQCAEGLVHIHSLLAENPDSHSTGLLGNFRSINIFLDKNFVPKVFNSNLSTFLGLSVMQKHTASVDRPNDQRSQIYYLDGRDISGQLFNPKSDVYSFGAVLLELITWKTVRYMSSGRVHMLTKDFLDTYRIDHSAAISFGKKVYDEQASGDNKPNQHVAPPLTKKFVKTPPTIVLIIPLNILEKITSNFSNDALIGEGPDARVFFGELSDGQKSAIKKLDPNEKIVVQVLTISRMLKHDNIVQILGYFIEGENRVLAYEYAPKGSLHDILHEGVRGAQPGTPLSWEQRVKIALSAAKGLEFLHEKAVPPVIHTNIRSNNIFIFGNDVAKIGDLGVSKQLYPESDNDYYNTRLYPLRSFGYDAIAPECRRTGQYSVKSDIYALGLYCWSF |
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| Function | Receptor-like cytoplasmic kinase 1 [UniProtKB/Swiss-Prot:Q9LUT0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_01g0013940 | OsLiXu_01g0013940.01 | Chr01 | 11773002 | 11777917 | + | NAM | ||
| CDS seq | atggagtcatgcgtctgcgcgtgcgcgtggccaactgcgcctaccgtggtggcactcttcgccaccggttatgaagaaggggtggctgaggcgcctcatgatgtcgatcccatgacaaatgggcatgtggtttttcaaagagtggagaacaactgtagcctaagatattttacggaaaatgagatatggcaaatcacccgtggttatagcattttactgggaaaaggttcattcggtaaagtctacaaaggaatgctggatggtcgatgccctgttgctgtgaagcgatacatacatggaacccggaaagaggagtttgccaaggaggtgatagtacattctcaaataaatcacaagaatgttgttcgacttttgggctgctgcacggaggaaaatgctctaatgatcgttatggagtttatctgtaatgggaacctgaatgatatccttcattgcagcaacacaaatggacgtgttcctttctctttgggcaaacgtttagacattgccattgaggttgctgaagtgctctggtgcatgcattcaatgtataatcccgttctccatggtgacatcaaacctgctaatatacttgtggatgaaaatctttcaccaaagctatctgattttggaatagcaagattgctttgtgctaatggggctcaacatactaacaatatcattggatctataggttatgttgatcctgcattctgcatgaatggaattctaaccccaaagagtgatgtttacagctttggagtggttttgctggaaatcatcaccagaaaaaaagcagtggatgggaccatcacccttgctcagcgtttcactgatgccgttgaacaagggaagaaggtgatgcatttgtttgacgaggacatcaacaatacaaaaaacatgaacttcctcgaagatattggcaagttagcagttaaatgcttgaggagggaggttgaagtgcgtcctgaaatggttgaagtagcaactagtctaagaatgattaggaaagctctagaggaagaagagggaaatctgattcagcagaacataagtgcaccaagcaactcaattccttcaaagaatgtgaagtcatcagcacagcaatttggcaatctaaaaatctttaaacaagaggaaattaagcttatgacaaaaaactacagcatgaaatttagggaagagttctgtgaacggctgtacaatggagtcattggcacaacacatgcagttatagtaaagcaagtgagaacatcttcagaaagtgacagaatgatgtttctgaagactatgagcatactgtctcagaagtatcacaaaaatattgccaatgttgctggcttccacttaggggattccatttcagagtgtgtgtatgaatcttgctgtgatttatcccggggaaatgacggccatgtttgcttctgtaaccgaaacctttatgacattatctgcaccagggaaaaactcccccttcatctacgtttatcaatagccgtccagtgtgcagagggcctggttcatatccattcattgttagctgaaaatcctgattcacattctacaggcctcttgggaaacttcaggtcgatcaatatttttctggacaagaacttcgtgccaaaagtcttcaattctaatctatcaacatttcttgggctttcagtcatgcagaaacataccgcctctgtcgatcgtcctaatgaccaaagatcacaaatatattatttagatggaagggatatttctggtcagctgttcaatcccaagtctgatgtttatagctttggagctgttcttttggaactcatcacttggaagacagtgagatacatgtctagtggaagagttcacatgcttaccAaagacttccttgatacttatagaatagaccatagtgcagcgatatcttttggcaagaaggtttatgatgagcaagctagtggtgacaacaaaccaaaccaacatgtagcccctcctcttaccaagaagtttgtcaaaactccaccaactattgtattgatcattcccctgaacatattggagaagataactagcaacttcagtaatgatgccctaataggagagggcccagacgccagagttttctttggagagcttagtgatgggcagaaatctgcaataaagaagcttgatcctaatgAaaaaattgtagtgcaggttttgaccatttcaagaatgttgaagcatgacaacattgtccaaattcttggatattttattgaaggggaaaatcgtgttcttgcttatgagtatgcaccaaagggttccttgcacgatattcttcatgagggtgtcagaggagcccagccaggaacacctctatcatgggagcagcgagtAaaaattgctctaagtgctgcaaaagggcttgagttcctccacgagaaggctgtgcctcctgtcatccacaccaacatcaggtccaacaacatatttatctttggcaatgatgttgcaaaaataggtgacctcggcgtctccaagcagctttatcccgaaagtgataatgactactacaatacccgactatatcctctgcgcagttttggctatgatgcaattgcaccagagtgtaggaggacaggacagtacagtgtaaagagcgatatctacgctttggggctgtactgttggagcttttaa
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| Protein seq | MESCVCACAWPTAPTVVALFATGYEEGVAEAPHDVDPMTNGHVVFQRVENNCSLRYFTENEIWQITRGYSILLGKGSFGKVYKGMLDGRCPVAVKRYIHGTRKEEFAKEVIVHSQINHKNVVRLLGCCTEENALMIVMEFICNGNLNDILHCSNTNGRVPFSLGKRLDIAIEVAEVLWCMHSMYNPVLHGDIKPANILVDENLSPKLSDFGIARLLCANGAQHTNNIIGSIGYVDPAFCMNGILTPKSDVYSFGVVLLEIITRKKAVDGTITLAQRFTDAVEQGKKVMHLFDEDINNTKNMNFLEDIGKLAVKCLRREVEVRPEMVEVATSLRMIRKALEEEEGNLIQQNISAPSNSIPSKNVKSSAQQFGNLKIFKQEEIKLMTKNYSMKFREEFCERLYNGVIGTTHAVIVKQVRTSSESDRMMFLKTMSILSQKYHKNIANVAGFHLGDSISECVYESCCDLSRGNDGHVCFCNRNLYDIICTREKLPLHLRLSIAVQCAEGLVHIHSLLAENPDSHSTGLLGNFRSINIFLDKNFVPKVFNSNLSTFLGLSVMQKHTASVDRPNDQRSQIYYLDGRDISGQLFNPKSDVYSFGAVLLELITWKTVRYMSSGRVHMLTKDFLDTYRIDHSAAISFGKKVYDEQASGDNKPNQHVAPPLTKKFVKTPPTIVLIIPLNILEKITSNFSNDALIGEGPDARVFFGELSDGQKSAIKKLDPNEKIVVQVLTISRMLKHDNIVQILGYFIEGENRVLAYEYAPKGSLHDILHEGVRGAQPGTPLSWEQRVKIALSAAKGLEFLHEKAVPPVIHTNIRSNNIFIFGNDVAKIGDLGVSKQLYPESDNDYYNTRLYPLRSFGYDAIAPECRRTGQYSVKSDIYALGLYCWSF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0310500 | RBH | 2.278887 | 2.996603 | 3.055621 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g20880 | RBH | 0.926081 | 0.573392 | 0.377189 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0310500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0014310 | RBH | 0.946484 | 7.387006 | 15.395485 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0014070 | RBH | 0.383648 | 2.292926 | 2.974219 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0014320 | RBH | 2.490438 | 0.815606 | 20.207672 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0013780 | RBH | 0.023851 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0013870 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0193300 | RBH | 2.2804825 | 16.178295 | 4.517144 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0013770 | RBH | 0.206957 | 0.166299 | 1.132936 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0190600 | RBH | 2.7538085 | 22.701965 | 11.333601 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0013810 | RBH | 0.136374 | 0.081277 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0013860 | RBH | 0.600059 | 0.589583 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0013830 | RBH | 4.087762 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0013630 | RBH | 0.0 | 0.460075 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G013950 | RBH | 0.000000 | 0.295496 | 0.580038 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0013740 | RBH | 0.791539 | 3.558885 | 4.605869 |
