Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_12g0007780 | OGI:08003740 | 15/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr12:7370813-7371136 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcaagggctgagggcgaagaggtttcgcctacccacgcccttcgccatagtaccaataaggcacggcgtcAagggctgcgggcgaagaggtttcgccacacccacGcccttcgCcatagtgccaataaggcacggcgtcaagggcTgcgggcgaagaggtttcgccaacccttgcccttcgccatagtgccaataaggcacggcgtcaagggctacgggcgaagaggtttcGccacacgccttgcccttcgccatagtgccaataaggcacagcgtcaagggctgcaggagAagaggtttcgccacacccacgcccttcgccat |
||||||||||
| CDS seq | atggcgaagggcgtgggtgtggcgaaacctctTctcctgcagcccttgacgctgtgccttattggcactatggcgaagggcaaggcgtgtggCgaaacctcttcgcccgtagcccttgacgccgtgccttattggcactatggcgaagggcaagggttggcgaaacctcttcgcccgcAgcccttgacgccgtgccttattggcactatgGcgaagggCgtgggtgtggcgaaacctcttcgcccgcagccctTgacgccgtgccttattggtactatggcgaagggcgtgggtaggcgaaacctcttcgccctcagcccttga |
||||||||||
| Protein seq | MAKGVGVAKPLLLQPLTLCLIGTMAKGKACGETSSPVALDAVPYWHYGEGQGLAKPLRPQPLTPCLIGTMAKGVGVAKPLRPQPLTPCLIGTMAKGVGRRNLFALSP |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_12g0007780 | OsLaMu_12g0007780.01 | Chr12 | 7370813 | 7371136 | - | NAM | ||
| CDS seq | atggcgaagggcgtgggtgtggcgaaacctctTctcctgcagcccttgacgctgtgccttattggcactatggcgaagggcaaggcgtgtggCgaaacctcttcgcccgtagcccttgacgccgtgccttattggcactatggcgaagggcaagggttggcgaaacctcttcgcccgcAgcccttgacgccgtgccttattggcactatgGcgaagggCgtgggtgtggcgaaacctcttcgcccgcagccctTgacgccgtgccttattggtactatggcgaagggcgtgggtaggcgaaacctcttcgccctcagcccttga
More
|
|||||||
| Protein seq | MAKGVGVAKPLLLQPLTLCLIGTMAKGKACGETSSPVALDAVPYWHYGEGQGLAKPLRPQPLTPCLIGTMAKGVGVAKPLRPQPLTPCLIGTMAKGVGRRNLFALSP |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g13690 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0007820 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0007910 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0007990 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0008000 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0007810 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0238500 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0007790 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0115000 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0007660 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0007930 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0007770 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0007790 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0001960 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G007700 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0007750 | SBH | 0.0 | 0.0 | 0.0 |
