Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_12g0006800 | OGI:12016180 | 15/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr12:6056217-6059563 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ataagagcacacgctttccttgaactgtctgattttccgaaccatttgtttgactcacagacaatcaaaagctactggataccaacaacgtgcaactgatatattgaaatagtagtactcctgtatttatccacacaattcaaggcagacaaacacagccaatcttgaatcatcaacatgtcatcgtccaccaagagagttgctcaccatcttccgtcattgctgctaaccgcgatgtacattctcctccaagtccaggccaccaccaatacggcacgcaccgtagtaccaccggttcggtgtcatccggatcaagcctcagcgctgctccggctgaagcactccttcaacgcgaccgccggcgactactccactgccttccagtcatgggtcgccggcacagactgctgccgctgggatggcgtcggctgcggtggcgcagatggccgtgtcacctcactcgacctgggcggccaccaattgcaagccggcagcgtcgaccctgcattgttcaggttaacctcactcaagcaccttaacctctccggtaacgacttcagcatgtcccagctcccggtgatcaccggattcgagcagctcaccgaactggtttatcttgatctctccgacaccaacatagcgggcgaggtgccaggtagcatcggccgccttacgaacctggtctacctcgacctctccaccggtttctatatcgtcgaatacaacgatgacgagcaggtgacattcgactcagactcagtttggcagctctcagcgccaaacatggagaccttgattgaaaacctcagcaacctggaggagctccatatgggaatggtggatctgtccggcaatggagaacgatggtgtgacaacatagccaaatatacaccaaagcttcaggttctaagtttaccttattgctcactgtcaggtcccatctgtgcatcattctctgccttgcaagcactcactatgatcgagcttcactataatcacttgtcaggttcagtgccagagttcttggctggcttctccaatctcactgttcttcagctatccaaaaacaagtttcaaggatcgtttcctcccatcatcttccagcacaagaagttgagaacgatcaacctctccaagaatcctggcatatctggtaatctgccaaatttctcacaggacactagcttggagaatctgttcctcagtaacacaaacttcacaggtacgattcctggttccatcatcaatctcatatctgttaagaagttagaccttggtgcaagtggcttctctggatcactgccctcttcgttaggcagtctcaaatacttggatatgctgcaactgtctggattacagctagtaggaaccattccgtcgtggatctcaaatctaacttctctcaccgttctccggatctataactgtggattgtctggaccagtgccttcttcaataggaaacttaagggaattgaccacattagcattgtacaactgcaacttttcagggacggttcatccacagatcttaaatttgacgcggctacaaactctcctgctccattcgaacaattttgctggcatggtggatctcacctcattctcaaaactgaaaaacctaactttcctgaatctctcaaacaataaactacttgtggtagaaggaaaaaatagttcatcactggtattgttccccaaactacaattactaagtttagcatcttgcagcatgacaaccttcccaaatatcttgagagaccttcctgacatcactagccttgacctttccaataaccaaatccagggagctatacctcagtgggcatggaaaacatggaaaggcttgcagtttatcgtcctgaacatatctcacaataactttacgagcctcggatctgatccttttctgcctctttatgtggaatacttcgatctcagtttcaacagcattgaagggcccatacctataccacaagaaggtagtagcacgctagattactcaagcaaccagttctcatccatgcctcttcgttactcgacttaccttggtgaaactgtgactttcaaggcgtccaaaaacaaactttctgggaatgttccaccgttgatctgcaccactgctaggaaactgcaactcatcgatctatcttataataacttgagtggctcaatcccatcttgtttattggagagtttcagcgaactacaagtattaagtctgaaagcaaataaatttgttggaaaattacctgatattatcaaggaaggttgtgcacttgaggcattggacttaagtgacaattcgattgaagggaagataccccgatctctagtttcctgcagaaacttggagatcctcgacattggaagcaatcagatcagtgactctttcccatgttggcttagtcaacttcctaaacttcaggtccttgtcctcaaatctaataagttgactggtcaagtaatggacccttcatacacaggacgtcaaatcagctgtgaatttccagcactcagaattgctgatatggcatcaaataacttaaatggaatgctgatggaaggatggtttaagatgctcaagtccatgatggccaggtctgataatgacacgttagtcatggaaaatcaatattaccatgggcagacataccagtttaccgctacagttacatacaaagggaatgacaggacaatttccaagatcttgagaagccttgtgctaatcgatgtctccggtaacgcattccatggtgccatcccagataccattggtgaacttgttctgcttcgtgggcttaacctgtcacacaatgcccttacagggccaattccatcacagtttggcaggttagatcaacttgagtcattggacctctctttcaatgagctttctggagagatccccaaggaactagcatcactgaactttctttcgacgttgaacttgtcgaacaacacgttggttggaagaataccagactcatatcagttttccacattttccaatagctcttttttgggaaacacaggtttgtgtggactaccgttatctagacaatgtgacaaccctgaagagccaagcgctataccatacacttcagagaaatccatagatgctgtacttctcctcttcactgcattgggatttggcatttcttttgcaatgactatcttgattgtatggggaagccacatgagaaaacgacactgagagtactttgtgtatgtatacaactctagcagtattgagtgaggccaatattcttaactgaagctatgaacgttctgatttgagcaataatcctgggactgttgtaacatgaattcctatttgacaggtag
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| CDS seq | atgtcatcgtccaccaagagagttgctcaccatcttccgtcattgctgctaaccgcgatgtacattctcctccaagtccaggccaccaccaatacggcacgcaccgtagtaccaccggttcggtgtcatccggatcaagcctcagcgctgctccggctgaagcactccttcaacgcgaccgccggcgactactccactgccttccagtcatgggtcgccggcacagactgctgccgctgggatggcgtcggctgcggtggcgcagatggccgtgtcacctcactcgacctgggcggccaccaattgcaagccggcagcgtcgaccctgcattgttcaggttaacctcactcaagcaccttaacctctccggtaacgacttcagcatgtcccagctcccggtgatcaccggattcgagcagctcaccgaactggtttatcttgatctctccgacaccaacatagcgggcgaggtgccaggtagcatcggccgccttacgaacctggtctacctcgacctctccaccggtttctatatcgtcgaatacaacgatgacgagcaggtgacattcgactcagactcagtttggcagctctcagcgccaaacatggagaccttgattgaaaacctcagcaacctggaggagctccatatgggaatggtggatctgtccggcaatggagaacgatggtgtgacaacatagccaaatatacaccaaagcttcaggttctaagtttaccttattgctcactgtcaggtcccatctgtgcatcattctctgccttgcaagcactcactatgatcgagcttcactataatcacttgtcaggttcagtgccagagttcttggctggcttctccaatctcactgttcttcagctatccaaaaacaagtttcaaggatcgtttcctcccatcatcttccagcacaagaagttgagaacgatcaacctctccaagaatcctggcatatctggtaatctgccaaatttctcacaggacactagcttggagaatctgttcctcagtaacacaaacttcacaggtacgattcctggttccatcatcaatctcatatctgttaagaagttagaccttggtgcaagtggcttctctggatcactgccctcttcgttaggcagtctcaaatacttggatatgctgcaactgtctggattacagctagtaggaaccattccgtcgtggatctcaaatctaacttctctcaccgttctccggatctataactgtggattgtctggaccagtgccttcttcaataggaaacttaagggaattgaccacattagcattgtacaactgcaacttttcagggacggttcatccacagatcttaaatttgacgcggctacaaactctcctgctccattcgaacaattttgctggcatggtggatctcacctcattctcaaaactgaaaaacctaactttcctgaatctctcaaacaataaactacttgtggtagaaggaaaaaatagttcatcactggtattgttccccaaactacaattactaagtttagcatcttgcagcatgacaaccttcccaaatatcttgagagaccttcctgacatcactagccttgacctttccaataaccaaatccagggagctatacctcagtgggcatggaaaacatggaaaggcttgcagtttatcgtcctgaacatatctcacaataactttacgagcctcggatctgatccttttctgcctctttatgtggaatacttcgatctcagtttcaacagcattgaagggcccatacctataccacaagaaggtagtagcacgctagattactcaagcaaccagttctcatccatgcctcttcgttactcgacttaccttggtgaaactgtgactttcaaggcgtccaaaaacaaactttctgggaatgttccaccgttgatctgcaccactgctaggaaactgcaactcatcgatctatcttataataacttgagtggctcaatcccatcttgtttattggagagtttcagcgaactacaagtattaagtctgaaagcaaataaatttgttggaaaattacctgatattatcaaggaaggttgtgcacttgaggcattggacttaagtgacaattcgattgaagggaagataccccgatctctagtttcctgcagaaacttggagatcctcgacattggaagcaatcagatcagtgactctttcccatgttggcttagtcaacttcctaaacttcaggtccttgtcctcaaatctaataagttgactggtcaagtaatggacccttcatacacaggacgtcaaatcagctgtgaatttccagcactcagaattgctgatatggcatcaaataacttaaatggaatgctgatggaaggatggtttaagatgctcaagtccatgatggccaggtctgataatgacacgttagtcatggaaaatcaatattaccatgggcagacataccagtttaccgctacagttacatacaaagggaatgacaggacaatttccaagatcttgagaagccttgtgctaatcgatgtctccggtaacgcattccatggtgccatcccagataccattggtgaacttgttctgcttcgtgggcttaacctgtcacacaatgcccttacagggccaattccatcacagtttggcaggtag
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| Protein seq | MSSSTKRVAHHLPSLLLTAMYILLQVQATTNTARTVVPPVRCHPDQASALLRLKHSFNATAGDYSTAFQSWVAGTDCCRWDGVGCGGADGRVTSLDLGGHQLQAGSVDPALFRLTSLKHLNLSGNDFSMSQLPVITGFEQLTELVYLDLSDTNIAGEVPGSIGRLTNLVYLDLSTGFYIVEYNDDEQVTFDSDSVWQLSAPNMETLIENLSNLEELHMGMVDLSGNGERWCDNIAKYTPKLQVLSLPYCSLSGPICASFSALQALTMIELHYNHLSGSVPEFLAGFSNLTVLQLSKNKFQGSFPPIIFQHKKLRTINLSKNPGISGNLPNFSQDTSLENLFLSNTNFTGTIPGSIINLISVKKLDLGASGFSGSLPSSLGSLKYLDMLQLSGLQLVGTIPSWISNLTSLTVLRIYNCGLSGPVPSSIGNLRELTTLALYNCNFSGTVHPQILNLTRLQTLLLHSNNFAGMVDLTSFSKLKNLTFLNLSNNKLLVVEGKNSSSLVLFPKLQLLSLASCSMTTFPNILRDLPDITSLDLSNNQIQGAIPQWAWKTWKGLQFIVLNISHNNFTSLGSDPFLPLYVEYFDLSFNSIEGPIPIPQEGSSTLDYSSNQFSSMPLRYSTYLGETVTFKASKNKLSGNVPPLICTTARKLQLIDLSYNNLSGSIPSCLLESFSELQVLSLKANKFVGKLPDIIKEGCALEALDLSDNSIEGKIPRSLVSCRNLEILDIGSNQISDSFPCWLSQLPKLQVLVLKSNKLTGQVMDPSYTGRQISCEFPALRIADMASNNLNGMLMEGWFKMLKSMMARSDNDTLVMENQYYHGQTYQFTATVTYKGNDRTISKILRSLVLIDVSGNAFHGAIPDTIGELVLLRGLNLSHNALTGPIPSQFGR |
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| Function | Receptor-like protein 6 [UniProtKB/Swiss-Prot:Q9C637] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_12g0006800 | OsLaMu_12g0006800.01 | Chr12 | 6056217 | 6059563 | + | NAM | ||
| CDS seq | atgtcatcgtccaccaagagagttgctcaccatcttccgtcattgctgctaaccgcgatgtacattctcctccaagtccaggccaccaccaatacggcacgcaccgtagtaccaccggttcggtgtcatccggatcaagcctcagcgctgctccggctgaagcactccttcaacgcgaccgccggcgactactccactgccttccagtcatgggtcgccggcacagactgctgccgctgggatggcgtcggctgcggtggcgcagatggccgtgtcacctcactcgacctgggcggccaccaattgcaagccggcagcgtcgaccctgcattgttcaggttaacctcactcaagcaccttaacctctccggtaacgacttcagcatgtcccagctcccggtgatcaccggattcgagcagctcaccgaactggtttatcttgatctctccgacaccaacatagcgggcgaggtgccaggtagcatcggccgccttacgaacctggtctacctcgacctctccaccggtttctatatcgtcgaatacaacgatgacgagcaggtgacattcgactcagactcagtttggcagctctcagcgccaaacatggagaccttgattgaaaacctcagcaacctggaggagctccatatgggaatggtggatctgtccggcaatggagaacgatggtgtgacaacatagccaaatatacaccaaagcttcaggttctaagtttaccttattgctcactgtcaggtcccatctgtgcatcattctctgccttgcaagcactcactatgatcgagcttcactataatcacttgtcaggttcagtgccagagttcttggctggcttctccaatctcactgttcttcagctatccaaaaacaagtttcaaggatcgtttcctcccatcatcttccagcacaagaagttgagaacgatcaacctctccaagaatcctggcatatctggtaatctgccaaatttctcacaggacactagcttggagaatctgttcctcagtaacacaaacttcacaggtacgattcctggttccatcatcaatctcatatctgttaagaagttagaccttggtgcaagtggcttctctggatcactgccctcttcgttaggcagtctcaaatacttggatatgctgcaactgtctggattacagctagtaggaaccattccgtcgtggatctcaaatctaacttctctcaccgttctccggatctataactgtggattgtctggaccagtgccttcttcaataggaaacttaagggaattgaccacattagcattgtacaactgcaacttttcagggacggttcatccacagatcttaaatttgacgcggctacaaactctcctgctccattcgaacaattttgctggcatggtggatctcacctcattctcaaaactgaaaaacctaactttcctgaatctctcaaacaataaactacttgtggtagaaggaaaaaatagttcatcactggtattgttccccaaactacaattactaagtttagcatcttgcagcatgacaaccttcccaaatatcttgagagaccttcctgacatcactagccttgacctttccaataaccaaatccagggagctatacctcagtgggcatggaaaacatggaaaggcttgcagtttatcgtcctgaacatatctcacaataactttacgagcctcggatctgatccttttctgcctctttatgtggaatacttcgatctcagtttcaacagcattgaagggcccatacctataccacaagaaggtagtagcacgctagattactcaagcaaccagttctcatccatgcctcttcgttactcgacttaccttggtgaaactgtgactttcaaggcgtccaaaaacaaactttctgggaatgttccaccgttgatctgcaccactgctaggaaactgcaactcatcgatctatcttataataacttgagtggctcaatcccatcttgtttattggagagtttcagcgaactacaagtattaagtctgaaagcaaataaatttgttggaaaattacctgatattatcaaggaaggttgtgcacttgaggcattggacttaagtgacaattcgattgaagggaagataccccgatctctagtttcctgcagaaacttggagatcctcgacattggaagcaatcagatcagtgactctttcccatgttggcttagtcaacttcctaaacttcaggtccttgtcctcaaatctaataagttgactggtcaagtaatggacccttcatacacaggacgtcaaatcagctgtgaatttccagcactcagaattgctgatatggcatcaaataacttaaatggaatgctgatggaaggatggtttaagatgctcaagtccatgatggccaggtctgataatgacacgttagtcatggaaaatcaatattaccatgggcagacataccagtttaccgctacagttacatacaaagggaatgacaggacaatttccaagatcttgagaagccttgtgctaatcgatgtctccggtaacgcattccatggtgccatcccagataccattggtgaacttgttctgcttcgtgggcttaacctgtcacacaatgcccttacagggccaattccatcacagtttggcaggtag
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| Protein seq | MSSSTKRVAHHLPSLLLTAMYILLQVQATTNTARTVVPPVRCHPDQASALLRLKHSFNATAGDYSTAFQSWVAGTDCCRWDGVGCGGADGRVTSLDLGGHQLQAGSVDPALFRLTSLKHLNLSGNDFSMSQLPVITGFEQLTELVYLDLSDTNIAGEVPGSIGRLTNLVYLDLSTGFYIVEYNDDEQVTFDSDSVWQLSAPNMETLIENLSNLEELHMGMVDLSGNGERWCDNIAKYTPKLQVLSLPYCSLSGPICASFSALQALTMIELHYNHLSGSVPEFLAGFSNLTVLQLSKNKFQGSFPPIIFQHKKLRTINLSKNPGISGNLPNFSQDTSLENLFLSNTNFTGTIPGSIINLISVKKLDLGASGFSGSLPSSLGSLKYLDMLQLSGLQLVGTIPSWISNLTSLTVLRIYNCGLSGPVPSSIGNLRELTTLALYNCNFSGTVHPQILNLTRLQTLLLHSNNFAGMVDLTSFSKLKNLTFLNLSNNKLLVVEGKNSSSLVLFPKLQLLSLASCSMTTFPNILRDLPDITSLDLSNNQIQGAIPQWAWKTWKGLQFIVLNISHNNFTSLGSDPFLPLYVEYFDLSFNSIEGPIPIPQEGSSTLDYSSNQFSSMPLRYSTYLGETVTFKASKNKLSGNVPPLICTTARKLQLIDLSYNNLSGSIPSCLLESFSELQVLSLKANKFVGKLPDIIKEGCALEALDLSDNSIEGKIPRSLVSCRNLEILDIGSNQISDSFPCWLSQLPKLQVLVLKSNKLTGQVMDPSYTGRQISCEFPALRIADMASNNLNGMLMEGWFKMLKSMMARSDNDTLVMENQYYHGQTYQFTATVTYKGNDRTISKILRSLVLIDVSGNAFHGAIPDTIGELVLLRGLNLSHNALTGPIPSQFGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.971058 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0217400 | RBH | 0.220661 | 0.061791 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g11500 | RBH | 0.152074 | 0.081809 | 0.255509 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0217400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0006960 | RBH | 0.000000 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0007050 | RBH | 0.000000 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0007050 | RBH | 0.000000 | 0.0 | 0.577097 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0007030 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0006890 | RBH | 0.0 | 0.0 | 0.485095 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0089100 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0006870 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0094900 | RBH | 0.209193 | 2.515343 | 2.3913045 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0006730 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0007040 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0006890 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0006930 | RBH | 0.0 | 0.0 | 0.098760 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0006730 | SBH | 0.043974 | 0.518187 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G006840 | RBH | 0.000000 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0006890 | RBH | 0.0 | 1.381696 | 0.548700 |
