Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLaMu_11g0024520 OGI:11083540 | 11/16 LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) Chr11:31727943-31733673
Gene Symbol C00481, -
DNA seq

ttgaacagttttttaattatttctttccttgggtaaaatggtatttagccctcgtgtatcacttggtacaaactctgcatccatagcattttttttacgcaaaggtgatgtacagtgattttatctcttcacatgataccaggcatgctctgtgttgctctgtttcatgtcaaaaaaactactgtcagcaatgttcacgagcgaagctgtataaattatcactcatagattttatttcttcacgtgatatgtgtgacatactaacatgttggtgtacgccaaagtttttgcaaggattaaacatctggaaacgcaaatttaacttggtgtatgaaaccacataacaaaagcagtgcagctgatccgaaatgaaacggatcgatcagagtcagagcatgcctttgatggtctgaccgtagcggctcctcctgtcgaagtgtcggttccagagcacgacgccgccgtagttgggcgtcccccgcaccagaggtagcgcgtcgaacaccagcgccgccgggttgatccacccgtcgctcgccgcgtcccacgccgccggcagcccgacgtggacgctcgcgttcgcgtacctcgccgtccaccccagccacgccccgtagaacggccgccgctccgacgagtcgtacgagcacctcctgtcgtcgtagaaccgcacgtggatccgcccgatcagacccgtcgccaccgccgcctcgccgctcgtctcctgcccgtccatgcaccgcaccgtcgccgtcagcagcacgccgccgtgttcgccgaggcgcttggccagctcgtcgtagttggccgacccgccgtggtcgatgtagaggtcgatgccgtcgaccacggcgtcgccgaaggggcggaacacgccatggcggccgccgccgaggtaggcgtgccagaggtggtcggcgacgtccttggccgacctgggcgtcgggagggagtactggtcgccgtcgccgccgatggagaggagcacggtgacgttcttggcgtgctggcagtgcttgatgtcggcgccgacgccggcgacggggtggccggagaggtcggcccagtagcggccgtggccgaagacggtgaggaaggagatgatgacggtgttgtagatgccggtgtcgcaggcctcccggagagagccctcgtccttgttccggccccagaagacggtgagctcgccggtcttgtcgccggcgaccggcccggggccggcgaggatgaggagcactataacaacaaatgagagcggcaatgcacggcgccgttgtgacgacgacgccatttggaaattaatggaattagaattggatttggatttggttgatattctttgatctttcttattgttgtgaacgatctgtgaaaatctgtcgtgcatgtccatgctacttatagtgtgttaagtgagctactgtcgatcgatttttcagctcgattaattgttttcagtggtcgaattcccgtcttttaattctgtgtatcgatcgttatctgcgccgctgccatttttcattgactaaagacgaatgttgtgtgcgcctatagggacagaccctgattagattattcaatcttagctaaattatgcatgtgagctatatatgtatcagtcaatagttagattattagtatatattggaactcccataattatttttgcgtttgtcactactatgtatctctagtctattcttgtgtgccgaagtgtatatatactgttcatttgatgatatggccgtacgtgcgacgacatagttgactgatcgacgagcgcaagtctttgagatctatatagctaaaagagagttgcattaatttgtcaaatgacccgaattctagatatacttgtatagtactagtacatgttatcagctgtctagcactggttagttttcagatgacgcacgttgatgcatgattgaggagatgcgtctttgacacggggagatagtttggtttgtgccggacctgtgtcttaagccctctcgaacacgtgaatggttaccattcatttcaaaattccctctctttttttctaatatactgtaaaaaaataaatttcttttaaaaaatagcattcttttttttaacaatctcggcgaattcccgttttaacaaagtagtcattacgttttatattacaaaagatgaaatttaagctaaatcgaaattgtattgtgcatatttatagattaatatatgaactgcaacaaaattttcattcattctcttttttctttgcgattacaaacaagacacgcgcacactctacacgcctgtgattatgctcccctagcacgtactcattgtgacggagattggcgatgggtataactttatcaccacgcatgctctctatgaagcaacgtgtgagtaatactccagtgggattcaaatccagtggatataactcaatcaccacatcacactgttttacagtaaagtacaaagttttgaatgagcattcggtttgatatcaaaattttgaatacaaactagacatggatatataggatagcagattctaatatcttgaggggatgttcccttgtgtatatttttcttttaaatttggtacaaataattatgaaaaattataaaaaaaaatattggttatgtagaatatagtgatatatatcggtccaccaaagttcaaatccaataaacatatcgaaaaaaaggacaaattcatatttgtgctactattctcacgttgaattttttacatatatatttggatgtgtgagttgggtttgggcctaagattttatagagttgtatagatacgttatatgaatattgtcatttatttttcagatttttataaccgttaaatggtttttaatcaaacgagaggacatccctcaagggatcaaaatagtttattcccggtatatagctagcccaagccccactctccaactcttgagaacaaatacaactactagcagatacgtagtgcatacttgaatttattgttcatgtaccttaattcaagcatacagcaccctgagagacactcacaaattacatacgcgcacacgtacacacgctacgcaaacaaattcaaagctggctccattattatacacaatcatgcatatactattgggaagaagaagttgatcgaattgaagctccgatgaagcagcaatggcggccggattgaatgtgagaatcgatcaaacgaagtccttgagcgccctgccgtagtagttatcgtaggctttgtcggcgcctcggtcccacagcatggcgccgccgtagttgctcgctgtctgcgccctctgcatcacgccgtagtagagcgactccgggtttatccagtccgccgccgtctcctccgccggaagccccacgtacacctggctcgccgggaaccgcgacgtccacgcgtcccagtcctcccagtcgaacaggctcctccgcccctcgccgtcggtcttgttcgtgcacgccgcgtcgccgtagaaccgcgggtggatgcgccgcaccagccccgtccccagcgccgccgccgcgttcgcgtccgggtacacgcacctcggcgtcgccgtcagcagcaccggcttgccgcggtagccggcgaggcgccggaccagcacgtcgtagttcgccggcccgccgtggtcgatgtagaggtcgacgccgtcgagcacggcgtcgccgaaggggcggaacacgcccctgcggccgccgccgaggtaggcgtgccagaggtggtccgcgacgtccttggccgaattggcggtggggagcgagtactggtagccgtcgccgccgacggagaggaggacggggatgttcttggactggcagtgcttgacgtcggcgccgactcgggagacatcgtggccggagaggtcggtccagtagcggccgtggccgaagacgctgaagaaggagatgatgacggtggtgtagaggccggtgtcgcaggcctccttcagtgagccctccgtcttgttgcggccccagaagacggcgatctggccggtctttccggtggcggtggcgaggcacgggaggaagacgacgacggctactagcatcgtcgtcgtcaagagacatagctggtggcgcgccatggctgatatgatacgatggcttaattagtacgtgatgtgaaggcatcgccggcgacatgagtaggtatatataagccgccatggccatggccatgcagaagataagggccgggggagctgtggtcgtcgtcaatggcgtgccggtgccgcctgcagacaaatcctggcgcggccgccgcagaaatcgacgaccaaactacacatggagacggactgcaggttattgttttgttccgagacaagtcaaatttaagtcaacaacttgcaatcaggacgaaacgtgaggctggtttaatggtttttgtcatgacaacaatttgtcattctctgcatgaagaatttatacgcctggaagaagcatcacattgacggaatatattctttttcaagtctgacccatatacgaacatgcatgtgccagtagtagccttatatatacatataatcaaccaataatgcaatgcaactatggtaaacagcacagtgaaacatgctggattcttttatatttcaaaactaaattaacataatcatactactttcaagcctgacccatacgaacatgcatatgccagtagacgggtacagatagtaacagatgacgcaatgcaggttggtaaacaacacagtgaaccatgtagtataaacactggagtaacattgcaattagacaatgtctttgatggcacggccgaatccggtgatcttgtcgtagtagcgatcccagagcatgacgccgccgtagttggcatcgtcctgcaccgacgatagcacgctctcccgcagcgtctgcgggtccacgaacccgctcatctcctccatcgccggccaccccacctgcacccgcgccgccgggaacctcgacgtccacgtcctccacgcgccccagaacggccgcgtctcgaagtagttgtagtcgcacgagctctcgttgtagaaccgcacgtgcagccgctcgaacagcgacagcgtcttcatcgtctccacctcgtcgtcgaacagcgccagcgagcacgccggcgacgccgtcaggcgcactgccggcttctcgcgaccgaagctcctcaggcgcctggcgagctcgtcgtagtggccccaccggccgcggtcgacgtagacgtcgacgccgtcgagcacggcgtcgccgaacgggcgggacacgcccctgcggccgccgccgaggtaggcgtgccacaggtgttcggccacgtcctgcgccgacttggcggtgggcagcgagtactggtcgccggcgccgccgatggagaggaggacggtgacgttcttggccttttggcagtgcttgacgtcggcgccgacgccggcgagagggtggccggcgaggtcggtccggtagcggccgtggccgaagacggtgaggaaggagatgacgacggtggtgtagaggccggtgtcgcaggtcgaacgcaatgagccctcgtccttgttccggccccagatgacggtgagctcgccggtcttgccggcagcggcggcgccattgatgatgaggagcacgagcaagctgcaatgcagagtagccaacagaggcggccggagttggagcttcgacatcttctcgatcgggccgatgatacaacacgcacacactaattcagttcattcagtacaca

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CDS seq

atgtcgaagctccaactccggccgcctctgttggctactctgcattgcagcttgctcgtgctcctcatcatcaatggcgccgccgctgccggcaagaccggcgagctcaccgtcatctggggccggaacaaggacgagggctcattgcgttcgacctgcgacaccggcctctacaccaccgtcgtcatctccttcctcaccgtcttcggccacggccgctaccggaccgacctcgccggccaccctctcgccggcgtcggcgccgacgtcaagcactgccaaaaggccaagaacgtcaccgtcctcctctccatcggcggcgccggcgaccagtactcgctgcccaccgccaagtcggcgcaggacgtggccgaacacctgtggcacgcctacctcggcggcggccgcaggggcgtgtcccgcccgttcggcgacgccgtgctcgacggcgtcgacgtctacgtcgaccgcggccggtggggccactacgacgagctcgccaggcgcctgaggagcttcggtcgcgagaagccggcagtgcgcctgacggcgtcgccggcgtgctcgctggcgctgttcgacgacgaggtggagacgatgaagacgctgtcgctgttcgagcggctgcacgtgcggttctacaacgagagctcgtgcgactacaactacttcgagacgcggccgttctggggcgcgtggaggacgtggacgtcgaggttcccggcggcgcgggtgcaggtggggtggccggcgatggaggagatgagcgggttcgtggacccgcagacgctgcgggagagcgtgctatcgtcggtgcaggacgatgccaactacggcggcgtcatgctctgggatcgctactacgacaagatcaccggattcggccccatggcgcgccaccagctatgtctcttgacgacgacgatgctagtagccgtcgtcgtcttcctcccgtgcctcgccaccgccaccggaaagaccggccagatcgccgtcttctggggccgcaacaagacggagggctcactgaaggaggcctgcgacaccggcctctacaccaccgtcatcatctccttcttcagcgtcttcggccacggccgctactggaccgacctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaagaacatccccgtcctcctctccgtcggcggcgacggctaccagtactcgctccccaccgccaattcggccaaggacgtcgcggaccacctctggcacgcctacctcggcggcggccgcaggggcgtgttccgccccttcggcgacgccgtgctcgacggcgtcgacctctacatcgaccacggcgggccggcgaactacgacgtgctggtccggcgcctcgccggctaccgcggcaagccggtgctgctgacggcgacgccgaggtgcgtgtacccggacgcgaacgcggcggcggcgctggggacggggctggtgcggcgcatccacccgcggttctacggcgacgcggcgtgcacgaacaagaccgacggcgaggggcggaggagcctgttcgactgggaggactgggacgcgtggacgtcgcggttcccggcgagccaggtgtacgtggggcttccggcggaggagacggcggcggactggataaacccggagtcgctctactacggcgtgatgcagagggcgcagacagcgagcaactacggcggcgccatgctgtgggaccgaggcgccgacaaagcctacgataactactacggcagggcgctcaaggacttcaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggaggcctgcgacaccggcatctacaacaccgtcatcatctccttcctcaccgtcttcggccacggccgctactgggccgacctctccggccaccccgtcgccggcgtcggcgccgacatcaagcactgccagcacgccaagaacgtcaccgtgctcctctccatcggcggcgacggcgaccagtactccctcccgacgcccaggtcggccaaggacgtcgccgaccacctctggcacgcctacctcggcggcggccgccatggcgtgttccgccccttcggcgacgccgtggtcgacggcatcgacctctacatcgaccacggcgggtcggccaactacgacgagctggccaagcgcctcggcgaacacggcggcgtgctgctgacggcgacggtgcggtgcatggacgggcaggagacgagcggcgaggcggcggtggcgacgggtctgatcgggcggatccacgtgcggttctacgacgacaggaggtgctcgtacgactcgtcggagcggcggccgttctacggggcgtggctggggtggacggcgaggtacgcgaacgcgagcgtccacgtcgggctgccggcggcgtgggacgcggcgagcgacgggtggatcaacccggcggcgctggtgttcgacgcgctacctctggtgcgggggacgcccaactacggcggcgtcgtgctctggaaccgacacttcgacaggaggagccgctacggtcagaccatcaaaggcatgctctga

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Protein seq

MSKLQLRPPLLATLHCSLLVLLIINGAAAAGKTGELTVIWGRNKDEGSLRSTCDTGLYTTVVISFLTVFGHGRYRTDLAGHPLAGVGADVKHCQKAKNVTVLLSIGGAGDQYSLPTAKSAQDVAEHLWHAYLGGGRRGVSRPFGDAVLDGVDVYVDRGRWGHYDELARRLRSFGREKPAVRLTASPACSLALFDDEVETMKTLSLFERLHVRFYNESSCDYNYFETRPFWGAWRTWTSRFPAARVQVGWPAMEEMSGFVDPQTLRESVLSSVQDDANYGGVMLWDRYYDKITGFGPMARHQLCLLTTTMLVAVVVFLPCLATATGKTGQIAVFWGRNKTEGSLKEACDTGLYTTVIISFFSVFGHGRYWTDLSGHDVSRVGADVKHCQSKNIPVLLSVGGDGYQYSLPTANSAKDVADHLWHAYLGGGRRGVFRPFGDAVLDGVDLYIDHGGPANYDVLVRRLAGYRGKPVLLTATPRCVYPDANAAAALGTGLVRRIHPRFYGDAACTNKTDGEGRRSLFDWEDWDAWTSRFPASQVYVGLPAEETAADWINPESLYYGVMQRAQTASNYGGAMLWDRGADKAYDNYYGRALKDFTGELTVFWGRNKDEGSLREACDTGIYNTVIISFLTVFGHGRYWADLSGHPVAGVGADIKHCQHAKNVTVLLSIGGDGDQYSLPTPRSAKDVADHLWHAYLGGGRHGVFRPFGDAVVDGIDLYIDHGGSANYDELAKRLGEHGGVLLTATVRCMDGQETSGEAAVATGLIGRIHVRFYDDRRCSYDSSERRPFYGAWLGWTARYANASVHVGLPAAWDAASDGWINPAALVFDALPLVRGTPNYGGVVLWNRHFDRRSRYGQTIKGML

Function Xylanase inhibitor protein 1 [UniProtKB/Swiss-Prot:Q7GCM7]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLaMu_11g0024520 OsLaMu_11g0024520.01 Chr11 31727943 31733673 - NAM
CDS seq

atgtcgaagctccaactccggccgcctctgttggctactctgcattgcagcttgctcgtgctcctcatcatcaatggcgccgccgctgccggcaagaccggcgagctcaccgtcatctggggccggaacaaggacgagggctcattgcgttcgacctgcgacaccggcctctacaccaccgtcgtcatctccttcctcaccgtcttcggccacggccgctaccggaccgacctcgccggccaccctctcgccggcgtcggcgccgacgtcaagcactgccaaaaggccaagaacgtcaccgtcctcctctccatcggcggcgccggcgaccagtactcgctgcccaccgccaagtcggcgcaggacgtggccgaacacctgtggcacgcctacctcggcggcggccgcaggggcgtgtcccgcccgttcggcgacgccgtgctcgacggcgtcgacgtctacgtcgaccgcggccggtggggccactacgacgagctcgccaggcgcctgaggagcttcggtcgcgagaagccggcagtgcgcctgacggcgtcgccggcgtgctcgctggcgctgttcgacgacgaggtggagacgatgaagacgctgtcgctgttcgagcggctgcacgtgcggttctacaacgagagctcgtgcgactacaactacttcgagacgcggccgttctggggcgcgtggaggacgtggacgtcgaggttcccggcggcgcgggtgcaggtggggtggccggcgatggaggagatgagcgggttcgtggacccgcagacgctgcgggagagcgtgctatcgtcggtgcaggacgatgccaactacggcggcgtcatgctctgggatcgctactacgacaagatcaccggattcggccccatggcgcgccaccagctatgtctcttgacgacgacgatgctagtagccgtcgtcgtcttcctcccgtgcctcgccaccgccaccggaaagaccggccagatcgccgtcttctggggccgcaacaagacggagggctcactgaaggaggcctgcgacaccggcctctacaccaccgtcatcatctccttcttcagcgtcttcggccacggccgctactggaccgacctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaagaacatccccgtcctcctctccgtcggcggcgacggctaccagtactcgctccccaccgccaattcggccaaggacgtcgcggaccacctctggcacgcctacctcggcggcggccgcaggggcgtgttccgccccttcggcgacgccgtgctcgacggcgtcgacctctacatcgaccacggcgggccggcgaactacgacgtgctggtccggcgcctcgccggctaccgcggcaagccggtgctgctgacggcgacgccgaggtgcgtgtacccggacgcgaacgcggcggcggcgctggggacggggctggtgcggcgcatccacccgcggttctacggcgacgcggcgtgcacgaacaagaccgacggcgaggggcggaggagcctgttcgactgggaggactgggacgcgtggacgtcgcggttcccggcgagccaggtgtacgtggggcttccggcggaggagacggcggcggactggataaacccggagtcgctctactacggcgtgatgcagagggcgcagacagcgagcaactacggcggcgccatgctgtgggaccgaggcgccgacaaagcctacgataactactacggcagggcgctcaaggacttcaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggaggcctgcgacaccggcatctacaacaccgtcatcatctccttcctcaccgtcttcggccacggccgctactgggccgacctctccggccaccccgtcgccggcgtcggcgccgacatcaagcactgccagcacgccaagaacgtcaccgtgctcctctccatcggcggcgacggcgaccagtactccctcccgacgcccaggtcggccaaggacgtcgccgaccacctctggcacgcctacctcggcggcggccgccatggcgtgttccgccccttcggcgacgccgtggtcgacggcatcgacctctacatcgaccacggcgggtcggccaactacgacgagctggccaagcgcctcggcgaacacggcggcgtgctgctgacggcgacggtgcggtgcatggacgggcaggagacgagcggcgaggcggcggtggcgacgggtctgatcgggcggatccacgtgcggttctacgacgacaggaggtgctcgtacgactcgtcggagcggcggccgttctacggggcgtggctggggtggacggcgaggtacgcgaacgcgagcgtccacgtcgggctgccggcggcgtgggacgcggcgagcgacgggtggatcaacccggcggcgctggtgttcgacgcgctacctctggtgcgggggacgcccaactacggcggcgtcgtgctctggaaccgacacttcgacaggaggagccgctacggtcagaccatcaaaggcatgctctga

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Protein seq

MSKLQLRPPLLATLHCSLLVLLIINGAAAAGKTGELTVIWGRNKDEGSLRSTCDTGLYTTVVISFLTVFGHGRYRTDLAGHPLAGVGADVKHCQKAKNVTVLLSIGGAGDQYSLPTAKSAQDVAEHLWHAYLGGGRRGVSRPFGDAVLDGVDVYVDRGRWGHYDELARRLRSFGREKPAVRLTASPACSLALFDDEVETMKTLSLFERLHVRFYNESSCDYNYFETRPFWGAWRTWTSRFPAARVQVGWPAMEEMSGFVDPQTLRESVLSSVQDDANYGGVMLWDRYYDKITGFGPMARHQLCLLTTTMLVAVVVFLPCLATATGKTGQIAVFWGRNKTEGSLKEACDTGLYTTVIISFFSVFGHGRYWTDLSGHDVSRVGADVKHCQSKNIPVLLSVGGDGYQYSLPTANSAKDVADHLWHAYLGGGRRGVFRPFGDAVLDGVDLYIDHGGPANYDVLVRRLAGYRGKPVLLTATPRCVYPDANAAAALGTGLVRRIHPRFYGDAACTNKTDGEGRRSLFDWEDWDAWTSRFPASQVYVGLPAEETAADWINPESLYYGVMQRAQTASNYGGAMLWDRGADKAYDNYYGRALKDFTGELTVFWGRNKDEGSLREACDTGIYNTVIISFLTVFGHGRYWADLSGHPVAGVGADIKHCQHAKNVTVLLSIGGDGDQYSLPTPRSAKDVADHLWHAYLGGGRHGVFRPFGDAVVDGIDLYIDHGGSANYDELAKRLGEHGGVLLTATVRCMDGQETSGEAAVATGLIGRIHVRFYDDRRCSYDSSERRPFYGAWLGWTARYANASVHVGLPAAWDAASDGWINPAALVFDALPLVRGTPNYGGVVLWNRHFDRRSRYGQTIKGML

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.239356 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0702200 RBH 0.0 0.0 0.501444
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g47610 RBH 0.0 0.0 0.128756
Nipponbare | IRGSP 1.0 | RAP-db Os11g0702100 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0024790 RBH 0.0 0.0 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0024780 RBH 0.0 0.000000 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0024270 RBH 0.0 0.0 0.630481
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0024350 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0024610 RBH 0.0 0.500402 0.962346
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0449400 RBH 0 0.099036 0.0503095
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0025150 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0445500 RBH 0.0256445 0.299197 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0024940 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0025030 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0024410 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0024130 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0000550 SBH 0.0 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G024510 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0024720 RBH 0.0 0.000000 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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