Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_11g0015120 | OGI:11010520 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr11:20436261-20437645 | ||||||||
| Gene Symbol | RLCK356, OsRLCK356 | ||||||||||
| DNA seq | ttatttgagaacaattacgatctcaaGgctcttcagattgcccaatgatgggggtatagCccctgtcaggTtgttcccagataacctcCtgcatataaccagcattcattttggcacttcaaacaatatccggattttacttcaatttcttcaccattcggcatataaaattgttgtaaaaaaaatagcatacagaattagcaaattgctgatggcgccaagcgaaggtGgtatcgcgccagtgagcaggttgttcgaaagatcaaggCtcacaagatGtttcagcttCcccagtgttgctggtattgatccatttaggcgactcccatacaattgactgcAaacatgatctgttagtatttttccagcaactcagcatctgagttcaagctgtcatgtcctaagcaaAGTgtgttatgaaattgttacaggtactggagaTttttcagtcctcccaattgaggaatcagaggCcctgagatgagtacattcaacaaatccctgcAcaaaagaaatcgaacaattatgttcactttgaactgcacaagatttacagataaagtatctcttggcttttttttatggcgtattAAatttcagcggttgtatgaacatttcatgataaaagctctgaatcttcaacgaaaatgtacagacgcaattgtgcatgtgcgtgcacatgctactgatgccttctcttgtactccctccgttTCcaaatgtttgacaccgttgactttttaGcacatgtttgaccgttcgtcttattcaaattttttttttgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaatgaatcaaatgatatgaaaaaaataaataattacttaaattttttgaataagacgaatggttaaacacgtactaaaaagtcaacggtgtcaaatattttgaaacggagggagtatttcttatctcttcacattttgacatttatttcaatttttagaagagaaaggaaggccttacacacggataacggagttatcaTtgtttcaggtaatatgcatccaggtgcagggattgtgaagggttggatcccatgtttgcagcacattttcagggtcctcccAagctaccttttgcttatacagtatgtcaccttcaattttcaccattgaaaataaagaacggaaatttcagaagtttAatactaTgtgagcAcacatcatttagtatgtgtgtAtatatatgtaccttcagtgttgcagCtgacaagtgttgcaagagcaacaaggccagtgaggacaacagctgatacttttgcttctgcaaacttagCccccattaccgtggttgattgagaatgttttgaaactttgagagctgcttgtactacattgaagtgcat
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| CDS seq | atgcacttcaatgtagtacaagcagctctcaaagtttcaaaacattctcaatcaaccacggtaatggggGctaagtttgcagaagcaaaagtatcagctgttgtcctcactggccttgttgctcttgcaacacttgtcaGctgcaacactgaaggtgacatactgtataagcaaaaggtagctTgggaggaccctgaaaatttcaaagtgaacataattgttcgatttcttttgTgcagggatttgttgaatgtactcatctcaggGcctctgattcctcaattgggaggactgaaaaAtctccagtaccttcaattgtatgggagtcgcctaaatggatcaataccagcaacactgggGaagctgaaaCatcttgtgaGccttgatctttcgaacaacctgctcactggcgcgatacCaccttcgcttggcgccatcagcaatttgctaattctgaggttatctgggaacaAcctgacagggGctatacccccatcattgggcaatctgaagagcCttgagatcgtaattgttctcaaataa
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| Protein seq | MHFNVVQAALKVSKHSQSTTVMGAKFAEAKVSAVVLTGLVALATLVSCNTEGDILYKQKVAWEDPENFKVNIIVRFLLCRDLLNVLISGPLIPQLGGLKNLQYLQLYGSRLNGSIPATLGKLKHLVSLDLSNNLLTGAIPPSLGAISNLLILRLSGNNLTGAIPPSLGNLKSLEIVIVLK |
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| Function | Leucine-rich repeat protein 1 [UniProtKB/Swiss-Prot:Q9FPJ5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_11g0015120 | OsLaMu_11g0015120.01 | Chr11 | 20436261 | 20437645 | - | NAM | ||
| CDS seq | atgcacttcaatgtagtacaagcagctctcaaagtttcaaaacattctcaatcaaccacggtaatggggGctaagtttgcagaagcaaaagtatcagctgttgtcctcactggccttgttgctcttgcaacacttgtcaGctgcaacactgaaggtgacatactgtataagcaaaaggtagctTgggaggaccctgaaaatttcaaagtgaacataattgttcgatttcttttgTgcagggatttgttgaatgtactcatctcaggGcctctgattcctcaattgggaggactgaaaaAtctccagtaccttcaattgtatgggagtcgcctaaatggatcaataccagcaacactgggGaagctgaaaCatcttgtgaGccttgatctttcgaacaacctgctcactggcgcgatacCaccttcgcttggcgccatcagcaatttgctaattctgaggttatctgggaacaAcctgacagggGctatacccccatcattgggcaatctgaagagcCttgagatcgtaattgttctcaaataa
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| Protein seq | MHFNVVQAALKVSKHSQSTTVMGAKFAEAKVSAVVLTGLVALATLVSCNTEGDILYKQKVAWEDPENFKVNIIVRFLLCRDLLNVLISGPLIPQLGGLKNLQYLQLYGSRLNGSIPATLGKLKHLVSLDLSNNLLTGAIPPSLGAISNLLILRLSGNNLTGAIPPSLGNLKSLEIVIVLK |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0514700 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g31560 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0514700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0015230 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0015180 | SBH | 0.0 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0015140 | SBH | 0.000000 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0014790 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0017320 | RBH | 0.0 | 0.0 | 0.145598 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0291500 | RBH | 0.220797 | 1.5807925 | 0.006958 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0015450 | RBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0302500 | SBH | 0.1127145 | 3.696681 | 0.039174 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0015380 | SBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0015350 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0015030 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0014810 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0015110 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G017200 | RBH | 0.000000 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0015260 | SBH | 0.0 | 1.681434 | 0.000000 |
