Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_11g0014980 | OGI:11054760 | 15/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr11:20297237-20299636 | ||||||||
| Gene Symbol | NAC129, ONAC129 | ||||||||||
| DNA seq | attcatttgagtgaccctatagtgtaactcgagcgagtgagcgagtgatatttgtgtgtaggctgtagctagcgagctaggacgatatggccagggttgtactttccactcccatagtgaatggtgcaacgatgcacctccccgctgtgggcatgtcacaccccaccgagggtgagcttgtcttccactacctctatcgtcgtgccgttaacatgcccctgccctctgaattcatttgtgatgtcaacattcttcgtcataacccatgggacatcgtcccaggtaagtatattttgacttatgctgccatatcatcttgctcccataaaaattgttagcacatccagatacatctcgaattgattaatctatgtctaccaggcttgattgattgcatggcctaatgtccgatttgttgttggttttgtttttgtctttttctctctcttgttccatgatggtgatcatggacataggagcactgacagagagggagaaagggaagtacttctttatgcagaaggagataaagtgacctagtagtcgccgtagcaaccgtatcacaagtaaagggttctggaggtcggcaggctcagaaaagccagtctactacaaccagggaggtggcagcgactgcatgctggtgggaatgaggcgcaccctaacattttactttgggaattcacggaccgcagagcgcacaaaatggggtatgcaagaatttcgccttgctggcaatggtctttcgccttaccctgcgatgaagcatgccaccggggatggctcaaaaccaccctgcaactgtgccgaaacaaccatcgccaaggtaattaagatgttgacttcaaacattttcctgtcatcattttttaatcatcttgttcgtttcatctgcaaattgaatctaataagtttgttattttcgagcaagtgtactattgtgaggtttagctttgggaaatggggagggggatttaataaatatgatgagccgtcttctagatataactctcatgtcgattttattcatggaaaggaaaatgtagagattgtctttgatgccgcttagggtacatgctattagatctgtagttatggactgctgcgatgcaaggaacgtgggatctatacatgattcaaattttgtcgagacgtagggatttacagttggtaaaatctagatatgtatatgtgtcagtggggagttccatgcatatgtgtcagtgggatcgagtcgatgtattataaattttgtcataaggttggatctggttacgagatctataatcgacttgaatttgacaagaagacaaaagtggtttgttgtcagcttgcgagcaatgaacctatttaatgaacaccatgtgttgttaactcgtttctcccatgatttttggagttttatatcagatgatgtatcaaccatttattggtcaaattttctgtgatgttcaaactgaacaatggagaatactcattttccgacatcaggaagaaaactgataacaaataagttaccatgtctttcaaattcagtagctatgttattagcatccgtatataacatatatacaaaatattcctttccaactaatagtacttcatcaattttcccttaggtatacatcttgcatataccatgctttgtgcgttcagcagcatccattaacaggcaattcggtgactgttttgcagagaaatgatggtctctctgcagttcttcgtaatgtgctcgccgtcaccccccttgtggaaaccgttgtcgaacctgatggatcatggctgatctgccgcatctacaggacaaggcagcgtgcattgcctgttatcactcctcctgccatagaaaatgcaagggaaatcattatccctcctgccaatggcaatgcaagggaggctcaagtccgctttattgacttcctgcggcagggatcgcacattgagtcatcctccccctgtagttgtatagttggcccctctttggcagagggaagtgatgaatctgctggtagtgttgaccaaaaggattgagcgcaatggagggagcaactaatcgataaaagaatgtcaactagtaaggaataaaaattctgagtgaggtgacctagtgcaagtatgacctgcaagttatataagtactgttggagactgtgttctgtttaagttggattgtaagctttgttcaatagtttcaaggaattaaagtgtgtttgggttctaggaggaaaacaaatggtcaatccagatgaagaagtctgaggaagcaacttttctaaaaaccgtttggtctgtccttcttcaatatattgtgttctgtattatctcatgcctttgtgtgagacaactagctatctattaatatctatatgcttctcttccaccgtatatatagcttcttca
More
|
||||||||||
| CDS seq | atggccagggttgtactttccactcccatagtgaatggtgcaacgatgcacctccccgctgtgggcatgtcacaccccaccgagggtgagcttgtcttccactacctctatcgtcgtgccgttaacatgcccctgccctctgaattcatttgtgatgtcaacattcttcgtcataacccatgggacatcgtcccaggagcactgacagagagggagaaagggaagtacttctttatgcagaaggagataaatcgccgtagcaaccgtatcacaagtaaagggttctggaggtcggcaggctcagaaaagccagtctactacaaccagggaggtggcagcgactgcatgctggtgggaatgaggcgcaccctaacattttactttgggaattcacggaccgcagagcgcacaaaatggggtatgcaagaatttcgccttgctggcaatggtctttcgccttaccctgcgatgaagcatgccaccggggatggctcaaaaccaccctgcaactgtgccgaaacaaccatcgccaagagaaatgatggtctctctgcagttcttcgtaatgtgctcgccgtcaccccccttgtggaaaccgttgtcgaacctgatggatcatggctgatctgccgcatctacaggacaaggcagcgtgcattgcctgttatcactcctcctgccatagaaaatgcaagggaaatcattatccctcctgccaatggcaatgcaagggaggctcaagtccgctttattgacttcctgcggcagggatcgcacattgagtcatcctccccctgtagttgtatagttggcccctctttggcagagggaagtgatgaatctgctggtagtgttgaccaaaaggattga
More
|
||||||||||
| Protein seq | MARVVLSTPIVNGATMHLPAVGMSHPTEGELVFHYLYRRAVNMPLPSEFICDVNILRHNPWDIVPGALTEREKGKYFFMQKEINRRSNRITSKGFWRSAGSEKPVYYNQGGGSDCMLVGMRRTLTFYFGNSRTAERTKWGMQEFRLAGNGLSPYPAMKHATGDGSKPPCNCAETTIAKRNDGLSAVLRNVLAVTPLVETVVEPDGSWLICRIYRTRQRALPVITPPAIENAREIIIPPANGNAREAQVRFIDFLRQGSHIESSSPCSCIVGPSLAEGSDESAGSVDQKD |
||||||||||
| Function | NAC domain-containing protein 83 [UniProtKB/Swiss-Prot:Q9FY93] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_11g0014980 | OsLaMu_11g0014980.02 | Chr11 | 20297237 | 20299465 | + | NAM | ||
| CDS seq | atggccagggttgtactttccactcccatagtgaatggtgcaacgatgcacctccccgctgtgggcatgtcacaccccaccgagggtgagcttgtcttccactacctctatcgtcgtgccgttaacatgcccctgccctctgaattcatttgtgatgtcaacattcttcgtcataacccatgggacatcgtcccaggctcagaaaagccagtctactacaaccagggaggtggcagcgactgcatgctggtgggaatgaggcgcaccctaacattttactttgggaattcacggaccgcagagcgcacaaaatggggtatgcaagaatttcgccttgctggcaatggtctttcgccttaccctgcgatgaagcatgccaccggggatggctcaaaaccaccctgcaactgtgccgaaacaaccatcgccaagagaaatgatggtctctctgcagttcttcgtaatgtgctcgccgtcaccccccttgtggaaaccgttgtcgaacctgatggatcatggctgatctgccgcatctacaggacaaggcagcgtgcattgcctgttatcactcctcctgccatagaaaatgcaagggaaatcattatccctcctgccaatggcaatgcaagggaggctcaagtccgctttattgacttcctgcggcagggatcgcacattgagtcatcctccccctgtagttgtatagttggcccctctttggcagagggaagtgatgaatctgctggtagtgttgaccaaaaggattga
More
|
|||||||
| Protein seq | MARVVLSTPIVNGATMHLPAVGMSHPTEGELVFHYLYRRAVNMPLPSEFICDVNILRHNPWDIVPGSEKPVYYNQGGGSDCMLVGMRRTLTFYFGNSRTAERTKWGMQEFRLAGNGLSPYPAMKHATGDGSKPPCNCAETTIAKRNDGLSAVLRNVLAVTPLVETVVEPDGSWLICRIYRTRQRALPVITPPAIENAREIIIPPANGNAREAQVRFIDFLRQGSHIESSSPCSCIVGPSLAEGSDESAGSVDQKD
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_11g0014980 | OsLaMu_11g0014980.01 | Chr11 | 20297237 | 20299636 | + | NAM | ||
| CDS seq | atggccagggttgtactttccactcccatagtgaatggtgcaacgatgcacctccccgctgtgggcatgtcacaccccaccgagggtgagcttgtcttccactacctctatcgtcgtgccgttaacatgcccctgccctctgaattcatttgtgatgtcaacattcttcgtcataacccatgggacatcgtcccaggagcactgacagagagggagaaagggaagtacttctttatgcagaaggagataaatcgccgtagcaaccgtatcacaagtaaagggttctggaggtcggcaggctcagaaaagccagtctactacaaccagggaggtggcagcgactgcatgctggtgggaatgaggcgcaccctaacattttactttgggaattcacggaccgcagagcgcacaaaatggggtatgcaagaatttcgccttgctggcaatggtctttcgccttaccctgcgatgaagcatgccaccggggatggctcaaaaccaccctgcaactgtgccgaaacaaccatcgccaagagaaatgatggtctctctgcagttcttcgtaatgtgctcgccgtcaccccccttgtggaaaccgttgtcgaacctgatggatcatggctgatctgccgcatctacaggacaaggcagcgtgcattgcctgttatcactcctcctgccatagaaaatgcaagggaaatcattatccctcctgccaatggcaatgcaagggaggctcaagtccgctttattgacttcctgcggcagggatcgcacattgagtcatcctccccctgtagttgtatagttggcccctctttggcagagggaagtgatgaatctgctggtagtgttgaccaaaaggattga
More
|
|||||||
| Protein seq | MARVVLSTPIVNGATMHLPAVGMSHPTEGELVFHYLYRRAVNMPLPSEFICDVNILRHNPWDIVPGALTEREKGKYFFMQKEINRRSNRITSKGFWRSAGSEKPVYYNQGGGSDCMLVGMRRTLTFYFGNSRTAERTKWGMQEFRLAGNGLSPYPAMKHATGDGSKPPCNCAETTIAKRNDGLSAVLRNVLAVTPLVETVVEPDGSWLICRIYRTRQRALPVITPPAIENAREIIIPPANGNAREAQVRFIDFLRQGSHIESSSPCSCIVGPSLAEGSDESAGSVDQKD
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0512600 | RBH | 0.0 | 0.0 | 1.380947 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g31380 | RBH | 0.0 | 0.0 | 0.360699 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0512600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0015100 | RBH | 0.0 | 0.0 | 0.474351 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0015050 | RBH | 0.0 | 0.0 | 0.936979 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0014990 | RBH | 0.0 | 0.0 | 3.341883 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0014700 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0015100 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0289600 | RBH | 0.0132105 | 0 | 0.033236 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0015310 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0301100 | SBH | 0 | 0.0038545 | 0.0184545 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0015280 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0015230 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0014930 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0014680 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G014820 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0015120 | RBH | 0.0 | 0.0 | 0.0 |
