Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLaMu_10g0004500 | OGI:10017560 | 11/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr10:5803068-5806152 | ||||||||
Gene Symbol | WAK108, OsWAK108 | ||||||||||
DNA seq | atGggcaagatgatcagcgggcaaaactactccgccgcctgcaggtcgctgttcgacgcgccggcggccgccgcgtgggacgggacgtgcgccgggctcggctgctgcgagtcggcggagctcgcgcctgggctgggcctcatctcggtcggcatgtaccagcaggtgaacagcatgtggaagacgttcccgtgcacctacgccatggccgtcgacaagtcgtggtacagcttctccctgcaggacctctacgggtacgatgttctcggcacgaaattctccgacggcgtgcctgtcgtgctcgacttcgccgtcaggaatgattcgtgtccggcggatgggaagacgttgccgatggcttgccgcagtgacaacagccgctgtgtcaacgccacctatGgccctggttatctctgcaagtgcaaggatggtttcgacggcaacccatacctccctgatggatgccaaggtacttcattatatcacacgtacgcttcatatcctgactggataaaaggatcagtaagaacatgtttttaccggCTTctttactgtacttcctccgatcaTttctctactagtgcagatcataaacattgacgtcattaactaattaatacgtatttcatagacattgatgaGtgtaagcTtcgagatgaacaacctgagcttcgtgatcagtatccatgccatGggatttgcaagaacacgatagggggctatcactgtcaatgcAaatttggaacgagaggtgatgccaaagcaggaacatgcagggaagtgtttcccctccctgcaatggttgctacacttggtaagcaccagtgcaccactaatattttgttcctagtgcgcAaaaaatgatgtcattttacatcgagatagttttgttgatttcaatatttgctcttccgctttgcAaattttattatatgccatacaatgcatattgattttcatattccaatctattagttcaagagcgatgctccgatgctctctataccgtttgttattaatTaAGGgtaaattagtaatttactaatatagtgattaggggAaacttatgattagggtaatttactaatatgtaattcatgttttttcctagctaaatcgatatgtggtcatccattacgcgtgcggtgtgcatcgctcatattccataaaaaaAcctaaaaagaaggaaaaaaaatggttcagtcactgctaaatatccttgcacctacTttttggataataattttgctccatgtatctattaccgctaactaaggtggtagtgtaaatagatcttaatccttcgatcaaatcagattaacggttcagattgatttctactgtcagtggagagaaccttaattcaaggagcttgccaacatctagcacaaaaaatcctcttcaacactaatttcaggttacaccatttggtctcataatgcctatttaaatcattacttatatgagatgttctcctatccttgaagaggtatatacctctacctcttcaccacttgaaaaggtaaaacatttaatttgattaaaataatgaacagAaaagtgaatggttgatgtcatgacttttctgacgcttggaaggtataccttctgacaaaactcaatagatatacttctaaaatattagaggaatacttaagagcatatAaaaacttcaatgtatgtgctctaacttctatgattatgaggtatatgaggaacatacctctgcaccgctaggagaaaaccactacttatatatatttgcaacctttttgaatcaattgtgaattctagatatattcttttgtcacagtgaacaactgtctttacattttttttgaaaaaaatatttgcgtttcattaacctaagaactattgacacgcacattggaattacttttgcatcgttggacgggctctgtcctctagtttgtccgagtatgtcttactttgaattttgtgcaccaacctactctgactttctggaAtatataTATtcttatgtacttcaatttttcaatgataagtcagcaagtcgtaacatatatatattgtacttcggccgattgttcctgcaggtataattggtgtcacattcattgtggtcataacagtattgtttaagcttttgtttgagGAgaggaaaaagaccaaagattttttcataaagaatggtggtccaatactagaaaaggttaacaacatcaagatcttcaaaaaggaagaacttaAGgcaataatacaatcgtgtaacgttataggaaaaggaggatttggggaggtttacaaagggcttcttgacaatcaacttgtcgcaattaagaaatcaatcagtgtagacaagtctcaagagaagcaattcgcaaatgagattattatccagtcacgagtaatccataagaatattgtcaaactcatcggctgttgcctcgaagtcgatgtcccactgttggtatatgagtttgttccacagggaagcctccatgacattctacatggcagtaataaggttagcctcagcttagacaaacgcttAaaaattgctgtaggaacagcagaaggattggcgtatatgcattcaaaaacatctacaactattttgcatggtgacataaaacctggcaatatacttttggataacagctttgacccaaaaatatctgattttggaatctcgagactaattgcgatagaaaaaacacacactagatatgtcataggtgatatgtgttacatggatccaatatatcttcagacggggttgTtgacaaagcagagtgacgtatatagttttggagttgttatgttagaacttcttactagtcaaaaggcatcttttggtgaagatatcaccctcgttaaaaatttcctcaatgcctatcaagataaaagagttctagatctttttgacaaggaaattttattggatactgacatcgaagtactccacgaacttgccatgctcattgtggaatgtctaaagctcgaagtggacagaaggccagaaatgacacatgtagcggaacagctacatatcatgaagagatctcatgaaaaaggcctgtatggtgcaaagatagtgtaa
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CDS seq | atGggcaagatgatcagcgggcaaaactactccgccgcctgcaggtcgctgttcgacgcgccggcggccgccgcgtgggacgggacgtgcgccgggctcggctgctgcgagtcggcggagctcgcgcctgggctgggcctcatctcggtcggcatgtaccagcaggtgaacagcatgtggaagacgttcccgtgcacctacgccatggccgtcgacaagtcgtggtacagcttctccctgcaggacctctacgggtacgatgttctcggcacgaaattctccgacggcgtgcctgtcgtgctcgacttcgccgtcaggaatgattcgtgtccggcggatgggaagacgttgccgatggcttgccgcagtgacaacagccgctgtgtcaacgccacctatGgccctggttatctctgcaagtgcaaggatggtttcgacggcaacccatacctccctgatggatgccaagacattgatgaGtgtaagcTtcgagatgaacaacctgagcttcgtgatcagtatccatgccatGggatttgcaagaacacgatagggggctatcactgtcaatgcAaatttggaacgagaggtgatgccaaagcaggaacatgcagggaagtgtttcccctccctgcaatggttgctacacttggtataattggtgtcacattcattgtggtcataacagtattgtttaagcttttgtttgagGAgaggaaaaagaccaaagattttttcataaagaatggtggtccaatactagaaaaggttaacaacatcaagatcttcaaaaaggaagaacttaAGgcaataatacaatcgtgtaacgttataggaaaaggaggatttggggaggtttacaaagggcttcttgacaatcaacttgtcgcaattaagaaatcaatcagtgtagacaagtctcaagagaagcaattcgcaaatgagattattatccagtcacgagtaatccataagaatattgtcaaactcatcggctgttgcctcgaagtcgatgtcccactgttggtatatgagtttgttccacagggaagcctccatgacattctacatggcagtaataaggttagcctcagcttagacaaacgcttAaaaattgctgtaggaacagcagaaggattggcgtatatgcattcaaaaacatctacaactattttgcatggtgacataaaacctggcaatatacttttggataacagctttgacccaaaaatatctgattttggaatctcgagactaattgcgatagaaaaaacacacactagatatgtcataggtgatatgtgttacatggatccaatatatcttcagacggggttgTtgacaaagcagagtgacgtatatagttttggagttgttatgttagaacttcttactagtcaaaaggcatcttttggtgaagatatcaccctcgttaaaaatttcctcaatgcctatcaagataaaagagttctagatctttttgacaaggaaattttattggatactgacatcgaagtactccacgaacttgccatgctcattgtggaatgtctaaagctcgaagtggacagaaggccagaaatgacacatgtagcggaacagctacatatcatgaagagatctcatgaaaaaggcctgtatggtgcaaagatagtgtaa
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Protein seq | MGKMISGQNYSAACRSLFDAPAAAAWDGTCAGLGCCESAELAPGLGLISVGMYQQVNSMWKTFPCTYAMAVDKSWYSFSLQDLYGYDVLGTKFSDGVPVVLDFAVRNDSCPADGKTLPMACRSDNSRCVNATYGPGYLCKCKDGFDGNPYLPDGCQDIDECKLRDEQPELRDQYPCHGICKNTIGGYHCQCKFGTRGDAKAGTCREVFPLPAMVATLGIIGVTFIVVITVLFKLLFEERKKTKDFFIKNGGPILEKVNNIKIFKKEELKAIIQSCNVIGKGGFGEVYKGLLDNQLVAIKKSISVDKSQEKQFANEIIIQSRVIHKNIVKLIGCCLEVDVPLLVYEFVPQGSLHDILHGSNKVSLSLDKRLKIAVGTAEGLAYMHSKTSTTILHGDIKPGNILLDNSFDPKISDFGISRLIAIEKTHTRYVIGDMCYMDPIYLQTGLLTKQSDVYSFGVVMLELLTSQKASFGEDITLVKNFLNAYQDKRVLDLFDKEILLDTDIEVLHELAMLIVECLKLEVDRRPEMTHVAEQLHIMKRSHEKGLYGAKIV |
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Function | Wall-associated receptor kinase 1 [UniProtKB/Swiss-Prot:Q39191] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLaMu_10g0004500 | OsLaMu_10g0004500.01 | Chr10 | 5803068 | 5806152 | + | NAM | ||
CDS seq | atGggcaagatgatcagcgggcaaaactactccgccgcctgcaggtcgctgttcgacgcgccggcggccgccgcgtgggacgggacgtgcgccgggctcggctgctgcgagtcggcggagctcgcgcctgggctgggcctcatctcggtcggcatgtaccagcaggtgaacagcatgtggaagacgttcccgtgcacctacgccatggccgtcgacaagtcgtggtacagcttctccctgcaggacctctacgggtacgatgttctcggcacgaaattctccgacggcgtgcctgtcgtgctcgacttcgccgtcaggaatgattcgtgtccggcggatgggaagacgttgccgatggcttgccgcagtgacaacagccgctgtgtcaacgccacctatGgccctggttatctctgcaagtgcaaggatggtttcgacggcaacccatacctccctgatggatgccaagacattgatgaGtgtaagcTtcgagatgaacaacctgagcttcgtgatcagtatccatgccatGggatttgcaagaacacgatagggggctatcactgtcaatgcAaatttggaacgagaggtgatgccaaagcaggaacatgcagggaagtgtttcccctccctgcaatggttgctacacttggtataattggtgtcacattcattgtggtcataacagtattgtttaagcttttgtttgagGAgaggaaaaagaccaaagattttttcataaagaatggtggtccaatactagaaaaggttaacaacatcaagatcttcaaaaaggaagaacttaAGgcaataatacaatcgtgtaacgttataggaaaaggaggatttggggaggtttacaaagggcttcttgacaatcaacttgtcgcaattaagaaatcaatcagtgtagacaagtctcaagagaagcaattcgcaaatgagattattatccagtcacgagtaatccataagaatattgtcaaactcatcggctgttgcctcgaagtcgatgtcccactgttggtatatgagtttgttccacagggaagcctccatgacattctacatggcagtaataaggttagcctcagcttagacaaacgcttAaaaattgctgtaggaacagcagaaggattggcgtatatgcattcaaaaacatctacaactattttgcatggtgacataaaacctggcaatatacttttggataacagctttgacccaaaaatatctgattttggaatctcgagactaattgcgatagaaaaaacacacactagatatgtcataggtgatatgtgttacatggatccaatatatcttcagacggggttgTtgacaaagcagagtgacgtatatagttttggagttgttatgttagaacttcttactagtcaaaaggcatcttttggtgaagatatcaccctcgttaaaaatttcctcaatgcctatcaagataaaagagttctagatctttttgacaaggaaattttattggatactgacatcgaagtactccacgaacttgccatgctcattgtggaatgtctaaagctcgaagtggacagaaggccagaaatgacacatgtagcggaacagctacatatcatgaagagatctcatgaaaaaggcctgtatggtgcaaagatagtgtaa
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Protein seq | MGKMISGQNYSAACRSLFDAPAAAAWDGTCAGLGCCESAELAPGLGLISVGMYQQVNSMWKTFPCTYAMAVDKSWYSFSLQDLYGYDVLGTKFSDGVPVVLDFAVRNDSCPADGKTLPMACRSDNSRCVNATYGPGYLCKCKDGFDGNPYLPDGCQDIDECKLRDEQPELRDQYPCHGICKNTIGGYHCQCKFGTRGDAKAGTCREVFPLPAMVATLGIIGVTFIVVITVLFKLLFEERKKTKDFFIKNGGPILEKVNNIKIFKKEELKAIIQSCNVIGKGGFGEVYKGLLDNQLVAIKKSISVDKSQEKQFANEIIIQSRVIHKNIVKLIGCCLEVDVPLLVYEFVPQGSLHDILHGSNKVSLSLDKRLKIAVGTAEGLAYMHSKTSTTILHGDIKPGNILLDNSFDPKISDFGISRLIAIEKTHTRYVIGDMCYMDPIYLQTGLLTKQSDVYSFGVVMLELLTSQKASFGEDITLVKNFLNAYQDKRVLDLFDKEILLDTDIEVLHELAMLIVECLKLEVDRRPEMTHVAEQLHIMKRSHEKGLYGAKIV
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0174548 | SBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g09700 | SBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os10g0174548 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0004340 | SBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0004280 | SBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0004210 | SBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0004500 | RBH | 0.0 | 0.000000 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0004260 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0089800 | SBH | 0 | 0.055363 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0004390 | RBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0098100 | RBH | 0.1040295 | 0 | 0 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0004240 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0004280 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0004410 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0004150 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0004550 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G004340 | RBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0004390 | RBH | 0.0 | 0.0 | 0.0 |