Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_09g0009790 | OGI:09042960 | 15/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr09:15311070-15311585 | ||||||||
| Gene Symbol | RLCK270, OsRLCK270 | ||||||||||
| DNA seq | ATGAAGCCCCGCGAGCTCCTGGAGCGCATCGCACGGCCGTTCAGCTCGTCGTCGTCCTCCCGCCGCGGTGGGGGCGCGGAGCGGCGGCGGCGGGAGGAggaggaggaggcagacctggaggcgatcgcggcgagggagcagcgcgcgttccggtacgaggccctgagcgccgcgacgcgggggttctccgagcggcagaagctcgggcagggcgggttcggccccgtctaccgcggccgcctcgccgacggccgggaggtcgccgtcaagcgcctcggcgccgggtcccgccagggcgcccgcgagttccgcaacgaggccaccctcctctcccgcgtccagcaccgcaacgtcgtcaacctcatcggctactgcgcccacggccccgacgacaagctcctcgtctacgagtacgtccccaacgagagcctcgacaagatcctcttctcctcccctccgccgcCGccccgaaactcccactgtgagtactccaatttcttcttccttcaccattga
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| CDS seq | ATGAAGCCCCGCGAGCTCCTGGAGCGCATCGCACGGCCGTTCAGCTCGTCGTCGTCCTCCCGCCGCGGTGGGGGCGCGGAGCGGCGGCGGCGGGAGGAggaggaggaggcagacctggaggcgatcgcggcgagggagcagcgcgcgttccggtacgaggccctgagcgccgcgacgcgggggttctccgagcggcagaagctcgggcagggcgggttcggccccgtctaccgcggccgcctcgccgacggccgggaggtcgccgtcaagcgcctcggcgccgggtcccgccagggcgcccgcgagttccgcaacgaggccaccctcctctcccgcgtccagcaccgcaacgtcgtcaacctcatcggctactgcgcccacggccccgacgacaagctcctcgtctacgagtacgtccccaacgagagcctcgacaagatcctcttctcctcccctccgccgcCGccccgaaactcccactgtgagtactccaatttcttcttccttcaccattga
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| Protein seq | MKPRELLERIARPFSSSSSSRRGGGAERRRREEEEEADLEAIAAREQRAFRYEALSAATRGFSERQKLGQGGFGPVYRGRLADGREVAVKRLGAGSRQGAREFRNEATLLSRVQHRNVVNLIGYCAHGPDDKLLVYEYVPNESLDKILFSSPPPPPRNSHCEYSNFFFLHH |
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| Function | Putative cysteine-rich receptor-like protein kinase 12 [UniProtKB/Swiss-Prot:O65472] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_09g0009790 | OsLaMu_09g0009790.01 | Chr09 | 15311070 | 15311585 | + | NAM | ||
| CDS seq | ATGAAGCCCCGCGAGCTCCTGGAGCGCATCGCACGGCCGTTCAGCTCGTCGTCGTCCTCCCGCCGCGGTGGGGGCGCGGAGCGGCGGCGGCGGGAGGAggaggaggaggcagacctggaggcgatcgcggcgagggagcagcgcgcgttccggtacgaggccctgagcgccgcgacgcgggggttctccgagcggcagaagctcgggcagggcgggttcggccccgtctaccgcggccgcctcgccgacggccgggaggtcgccgtcaagcgcctcggcgccgggtcccgccagggcgcccgcgagttccgcaacgaggccaccctcctctcccgcgtccagcaccgcaacgtcgtcaacctcatcggctactgcgcccacggccccgacgacaagctcctcgtctacgagtacgtccccaacgagagcctcgacaagatcctcttctcctcccctccgccgcCGccccgaaactcccactgtgagtactccaatttcttcttccttcaccattga
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| Protein seq | MKPRELLERIARPFSSSSSSRRGGGAERRRREEEEEADLEAIAAREQRAFRYEALSAATRGFSERQKLGQGGFGPVYRGRLADGREVAVKRLGAGSRQGAREFRNEATLLSRVQHRNVVNLIGYCAHGPDDKLLVYEYVPNESLDKILFSSPPPPPRNSHCEYSNFFFLHH |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.114405 | 16.186338 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0551201 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g24330 | RBH | 0.391573 | 0.257358 | 0.156502 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0551201 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0009930 | SBH | 0.099620 | 6.192244 | 0.240411 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0009870 | SBH | 0.0 | 2.672480 | 0.786546 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0010150 | RBH | 0.0 | 8.073066 | 0.645319 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0009900 | RBH | 0.065337 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0010050 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0214000 | SBH | 3.6295265 | 1.601562 | 0.0854925 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0010010 | RBH | 0.123656 | 0.310595 | 0.120122 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0230000 | RBH | 2.339968 | 34.142339 | 2.302053 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0010010 | RBH | 0.0 | 0.354505 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0009780 | RBH | 0.660488 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0009920 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0009750 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G010270 | RBH | 0.0 | 0.0 | 0.474114 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0010060 | RBH | 0.0 | 0.0 | 0.896749 |
