Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_09g0005710 | OGI:09028800 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr09:10123174-10126333 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcatgtggcagggagcgcctccgtaatcttcatcgccttcggtttgttctctcccttgatgtcaagcaagaacttcaccacaagcctcatcgacgggcggttgtttgggaggttcttaacgcagagcagcgcaatcctcagaactctacacatctcatccttgaaatgttcagcaatcttctcatctagcactgactctgccccattctgctccacattggtggctgcccatgccaccaggtccttgtcaccaatatcggatgacatgggactctttccagtaacaagttccagcatgaccacaccaaagctatatacatcgctcttctcagttacacgtatagtgtaggcatactctgcgatacaaaacagacaaacacacataagaaactaggaagaaattacggtgacttatgacaatttttagccaattacaacaacccacaagtacaaaaagaaatcctaatcagaacatatggaccaaaaaagactgtctgaactgatcatcaaatcaatctcaaaagctacattcatatatactctaattaggaacacttctcagaaacaaattaggaacacttctcagaaacaaattaggcataaggaactcaccaggagcaatgtatccacaagaaccagcaatgacagacatggtggccggcccatcaccaatagacttcgcgacgccaaaatctgctatcttggcacgaaaatcagcatcaagcagaatgttgtttgacttcacatctcggtggatgatcgtgggaacaaagtcatggtgcaagtagctgagcccctcagcagcatcgagtgcgatgttgtacctcgcaggccaatccaagatgccagctttggcactgtggagaaagtctcccaggctgccattaggcatgaactcatagacaagcaaccggcatgcctcgttcgtaagacagcagaagagcttgacaatgttcttgtgcctaactttgctcaatgtttccacctcggcctcaaagctgtcgatcttcttgctcgccaccgtgctacttgcccaaagcttcttcacagccaaggtatcactcctaggcctgacaacagccttgtacaccatccctgatgaacccttgccaatcaaattgttctcagtcaggctattcacaatgtccctctcattgaactccaccttgtggaaggatgtgagtacccactctgaattctcgctgtcaacttcgatggcgcgcttattgtagctcctatacttgtaaatgaaccaggcaacactcgtgagtagaatgccagcagcagctgtgaggatggctacagccatctggattcgggcacgccggttggaatcaggatcaccattccttgaacatagcccatagcacaggccaggattacccaagaagcacggtcggaattgatcagtgtcgaataagattggaagatgcccagtgagcttgttataggacaggttaagaacacccagcagtttcagatcctgcaattgtgcaggcacctgaccagaaagctcattgttcgacaaatcaagcgtgctcatcttatccatacccccaagctcttcaggtatactaccactgaggtggttgtctgaaagattcaacaatgtcaaattcttcagttctccgatgctgcgcgggatctctccagaaagggaattgttgctcaaatcaagcaggaaaagcaccgaaagagatgcgagtgacggcggcactgtcccggtgaagctgttgtccgaagccgacagcaccaccagctgggttaaattccccaattcagcaggaagaacaccggtgaatcgattgttatcaatgatgaggttggacaggttcgcggcacggccaatggcggcgccgacattgccagagaacgcattgccacggagctcgagcaggtagacatggggcaatccccagaattccggcggcaccgggccggagagccgattgcagggcagcctcaccctcatcagcgacctgcatttccccagctcgtcgggaatggcgccgtcgaacatgttgttcagcagcaggagctggctcagcttcccgccggcgcagagcgtcgccggaatccggccggacatgcggttgtccgagacgtccagcgactggagcgggcagttcttcccgaactccggcgggaacggcccttcgatctggttggcgaagatcatcagctcggtcagcctcgccgccgccgcgagcgtcgccggcaaccgcccggtcaggttgttctgatacatgtgcacgctctccaggctcggcgcggcgaacatgtcctccggtatctcgccggagatgtggttcatcgagatgtccagttgctggagcttcttgaggccgcccaaccccgccggaatcctgccggagagctggttggagaagagctctatctggaccaaagaactcaagttcacgatgctcggtggtatctcaccggtgaggttgttgctcgagaggtccagatcgacgaggttggtcagcttcccgacggaaggagggatgctaccggtgagggagcagttggcgaggaaaagcacgcggagcgcggcgaggtcgccgaggttgtccggcaatggcgacggggagaacgagttgtaggcgagcagcagctcctggagcgcggttacgttggcgaggaaccccgggaacgcgccggagacgaggttctgtatcaggttgagcaccgccagcgacgggaacccgccgccgtaggccgccgggagctcgccggagaagttgttcgacgcgaggttgagcgtctcgagcgcctggagccccgcgaggcaggcgggaagcgggcccgtgaggtcgttcgacgacatgtcgaggtgccgcagcgaccgcagcgagcagagcgcgacggggaaccccccggcgaggtacagaccgccgaggtagagccccgcgacgacgccgtcggagacggcagcgttcccggccgcggcgtcgcacgccacgtgcggccagcggcagaggtcgtcgccgcgccatgccgagagcgcggcggtcgggtccgtgagcgcggccctggcggcgaggagcgcgcccgcgtcgccggacgcggcgccgccggtgcccgcgcggacgcccggcaggaggaggccggcgaacacgacggcgaggtggagcaaccgccggtggagcggcgccat
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| CDS seq | atggcgccgctccaccggcggttgctccacctcgccgtcgtgttcgccggcctcctcctgccgggcgtccgcgcgggcaccggcggcgccgcgtccggcgacgcgggcgcgctcctcgccgccagggccgcgctcacggacccgaccgccgcgctctcggcatggcgcggcgacgacctctgccgctggccgcacgtggcgtgcgacgccgcggccgggaacgctgccgtctccgacggcgtcgtcgcggggctctacctcggcggtctgtacctcgccggggggttccccgtcgcgctctgctcgctgcggtcgctgcggcacctcgacatgtcgtcgaacgacctcacgggcccgcttcccgcctgcctcgcggggctccaggcgctcgagacgctcaacctcgcgtcgaacaacttctccggcgagctcccggcggcctacggcggcgggttcccgtcgctggcggtgctcaacctgatacagaacctcgtctccggcgcgttcccggggttcctcgccaacgtaaccgcgctccaggagctgctgctcgcctacaactcgttctccccgtcgccattgccggacaacctcggcgacctcgccgcgctccgcgtgcttttcctcgccaactgctccctcaccggtagcatccctccttccgtcgggaagctgaccaacctcgtcgatctggacctctcgagcaacaacctcaccggtgagataccaccgagcatcgtgaacttgagttctttggtccagatagagctcttctccaaccagctctccggcaggattccggcggggttgggcggcctcaagaagctccagcaactggacatctcgatgaaccacatctccggcgagataccggaggacatgttcgccgcgccgagcctggagagcgtgcacatgtatcagaacaacctgaccgggcggttgccggcgacgctcgcggcggcggcgaggctgaccgagctgatgatcttcgccaaccagatcgaagggccgttcccgccggagttcgggaagaactgcccgctccagtcgctggacgtctcggacaaccgcatgtccggccggattccggcgacgctctgcgccggcgggaagctgagccagctcctgctgctgaacaacatgttcgacggcgccattcccgacgagctggggaaatgcaggtcgctgatgagggtgaggctgccctgcaatcggctctccggcccggtgccgccggaattctggggattgccccatgtctacctgctcgagctccgtggcaatgcgttctctggcaatgtcggcgccgccattggccgtgccgcgaacctgtccaacctcatcattgataacaatcgattcaccggtgttcttcctgctgaattggggaatttaacccagctggtggtgctgtcggcttcggacaacagcttcaccgggacagtgccgccgtcactcgcatctctttcggtgcttttcctgcttgatttgagcaacaattccctttctggagagatcccgcgcagcatcggagaactgaagaatttgacattgttgaatctttcagacaaccacctcagtggtagtatacctgaagagcttgggggtatggataagatgagcacgcttgatttgtcgaacaatgagctttctggtcaggtgcctgcacaattgcaggatctgaaactgctgggtgttcttaacctgtcctataacaagctcactgggcatcttccaatcttattcgacactgatcaattccgaccgtgcttcttgggtaatcctggcctgtgctatgggctatgttcaaggaatggtgatcctgattccaaccggcgtgcccgaatccagatggctgtagccatcctcacagctgctgctggcattctactcacgagtgttgcctggttcatttacaagtataggagctacaataagcgcgccatcgaagttgacagcgagaattcagagtgggtactcacatccttccacaaggtggagttcaatgagagggacattgtgaatagcctgactgagaacaatttgattggcaagggttcatcagggatggtgtacaaggctgttgtcaggcctaggagtgataccttggctgtgaagaagctttgggcaagtagcacggtggcgagcaagaagatcgacagctttgaggccgaggtggaaacattgagcaaagttaggcacaagaacattgtcaagctcttctgctgtcttacgaacgaggcatgccggttgcttgtctatgagttcatgcctaatggcagcctgggagactttctccacaatgagaagattgctgaacatttcaaggatgagatgtgtagagttctgaggattgcgctgctctgcgttaagaacctcccaaacaaccgcccgtcgatgaggcttgtggtgaagttcttgcttgacatcaagggagagaacaaaccgaaggcgatgaagattacggaggcgctccctgccacatga
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| Protein seq | MAPLHRRLLHLAVVFAGLLLPGVRAGTGGAASGDAGALLAARAALTDPTAALSAWRGDDLCRWPHVACDAAAGNAAVSDGVVAGLYLGGLYLAGGFPVALCSLRSLRHLDMSSNDLTGPLPACLAGLQALETLNLASNNFSGELPAAYGGGFPSLAVLNLIQNLVSGAFPGFLANVTALQELLLAYNSFSPSPLPDNLGDLAALRVLFLANCSLTGSIPPSVGKLTNLVDLDLSSNNLTGEIPPSIVNLSSLVQIELFSNQLSGRIPAGLGGLKKLQQLDISMNHISGEIPEDMFAAPSLESVHMYQNNLTGRLPATLAAAARLTELMIFANQIEGPFPPEFGKNCPLQSLDVSDNRMSGRIPATLCAGGKLSQLLLLNNMFDGAIPDELGKCRSLMRVRLPCNRLSGPVPPEFWGLPHVYLLELRGNAFSGNVGAAIGRAANLSNLIIDNNRFTGVLPAELGNLTQLVVLSASDNSFTGTVPPSLASLSVLFLLDLSNNSLSGEIPRSIGELKNLTLLNLSDNHLSGSIPEELGGMDKMSTLDLSNNELSGQVPAQLQDLKLLGVLNLSYNKLTGHLPILFDTDQFRPCFLGNPGLCYGLCSRNGDPDSNRRARIQMAVAILTAAAGILLTSVAWFIYKYRSYNKRAIEVDSENSEWVLTSFHKVEFNERDIVNSLTENNLIGKGSSGMVYKAVVRPRSDTLAVKKLWASSTVASKKIDSFEAEVETLSKVRHKNIVKLFCCLTNEACRLLVYEFMPNGSLGDFLHNEKIAEHFKDEMCRVLRIALLCVKNLPNNRPSMRLVVKFLLDIKGENKPKAMKITEALPAT |
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| Function | Receptor-like protein kinase HSL1 [UniProtKB/Swiss-Prot:Q9SGP2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_09g0005710 | OsLaMu_09g0005710.01 | Chr09 | 10123174 | 10126333 | - | NAM | ||
| CDS seq | atggcgccgctccaccggcggttgctccacctcgccgtcgtgttcgccggcctcctcctgccgggcgtccgcgcgggcaccggcggcgccgcgtccggcgacgcgggcgcgctcctcgccgccagggccgcgctcacggacccgaccgccgcgctctcggcatggcgcggcgacgacctctgccgctggccgcacgtggcgtgcgacgccgcggccgggaacgctgccgtctccgacggcgtcgtcgcggggctctacctcggcggtctgtacctcgccggggggttccccgtcgcgctctgctcgctgcggtcgctgcggcacctcgacatgtcgtcgaacgacctcacgggcccgcttcccgcctgcctcgcggggctccaggcgctcgagacgctcaacctcgcgtcgaacaacttctccggcgagctcccggcggcctacggcggcgggttcccgtcgctggcggtgctcaacctgatacagaacctcgtctccggcgcgttcccggggttcctcgccaacgtaaccgcgctccaggagctgctgctcgcctacaactcgttctccccgtcgccattgccggacaacctcggcgacctcgccgcgctccgcgtgcttttcctcgccaactgctccctcaccggtagcatccctccttccgtcgggaagctgaccaacctcgtcgatctggacctctcgagcaacaacctcaccggtgagataccaccgagcatcgtgaacttgagttctttggtccagatagagctcttctccaaccagctctccggcaggattccggcggggttgggcggcctcaagaagctccagcaactggacatctcgatgaaccacatctccggcgagataccggaggacatgttcgccgcgccgagcctggagagcgtgcacatgtatcagaacaacctgaccgggcggttgccggcgacgctcgcggcggcggcgaggctgaccgagctgatgatcttcgccaaccagatcgaagggccgttcccgccggagttcgggaagaactgcccgctccagtcgctggacgtctcggacaaccgcatgtccggccggattccggcgacgctctgcgccggcgggaagctgagccagctcctgctgctgaacaacatgttcgacggcgccattcccgacgagctggggaaatgcaggtcgctgatgagggtgaggctgccctgcaatcggctctccggcccggtgccgccggaattctggggattgccccatgtctacctgctcgagctccgtggcaatgcgttctctggcaatgtcggcgccgccattggccgtgccgcgaacctgtccaacctcatcattgataacaatcgattcaccggtgttcttcctgctgaattggggaatttaacccagctggtggtgctgtcggcttcggacaacagcttcaccgggacagtgccgccgtcactcgcatctctttcggtgcttttcctgcttgatttgagcaacaattccctttctggagagatcccgcgcagcatcggagaactgaagaatttgacattgttgaatctttcagacaaccacctcagtggtagtatacctgaagagcttgggggtatggataagatgagcacgcttgatttgtcgaacaatgagctttctggtcaggtgcctgcacaattgcaggatctgaaactgctgggtgttcttaacctgtcctataacaagctcactgggcatcttccaatcttattcgacactgatcaattccgaccgtgcttcttgggtaatcctggcctgtgctatgggctatgttcaaggaatggtgatcctgattccaaccggcgtgcccgaatccagatggctgtagccatcctcacagctgctgctggcattctactcacgagtgttgcctggttcatttacaagtataggagctacaataagcgcgccatcgaagttgacagcgagaattcagagtgggtactcacatccttccacaaggtggagttcaatgagagggacattgtgaatagcctgactgagaacaatttgattggcaagggttcatcagggatggtgtacaaggctgttgtcaggcctaggagtgataccttggctgtgaagaagctttgggcaagtagcacggtggcgagcaagaagatcgacagctttgaggccgaggtggaaacattgagcaaagttaggcacaagaacattgtcaagctcttctgctgtcttacgaacgaggcatgccggttgcttgtctatgagttcatgcctaatggcagcctgggagactttctccacaatgagaagattgctgaacatttcaaggatgagatgtgtagagttctgaggattgcgctgctctgcgttaagaacctcccaaacaaccgcccgtcgatgaggcttgtggtgaagttcttgcttgacatcaagggagagaacaaaccgaaggcgatgaagattacggaggcgctccctgccacatga
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| Protein seq | MAPLHRRLLHLAVVFAGLLLPGVRAGTGGAASGDAGALLAARAALTDPTAALSAWRGDDLCRWPHVACDAAAGNAAVSDGVVAGLYLGGLYLAGGFPVALCSLRSLRHLDMSSNDLTGPLPACLAGLQALETLNLASNNFSGELPAAYGGGFPSLAVLNLIQNLVSGAFPGFLANVTALQELLLAYNSFSPSPLPDNLGDLAALRVLFLANCSLTGSIPPSVGKLTNLVDLDLSSNNLTGEIPPSIVNLSSLVQIELFSNQLSGRIPAGLGGLKKLQQLDISMNHISGEIPEDMFAAPSLESVHMYQNNLTGRLPATLAAAARLTELMIFANQIEGPFPPEFGKNCPLQSLDVSDNRMSGRIPATLCAGGKLSQLLLLNNMFDGAIPDELGKCRSLMRVRLPCNRLSGPVPPEFWGLPHVYLLELRGNAFSGNVGAAIGRAANLSNLIIDNNRFTGVLPAELGNLTQLVVLSASDNSFTGTVPPSLASLSVLFLLDLSNNSLSGEIPRSIGELKNLTLLNLSDNHLSGSIPEELGGMDKMSTLDLSNNELSGQVPAQLQDLKLLGVLNLSYNKLTGHLPILFDTDQFRPCFLGNPGLCYGLCSRNGDPDSNRRARIQMAVAILTAAAGILLTSVAWFIYKYRSYNKRAIEVDSENSEWVLTSFHKVEFNERDIVNSLTENNLIGKGSSGMVYKAVVRPRSDTLAVKKLWASSTVASKKIDSFEAEVETLSKVRHKNIVKLFCCLTNEACRLLVYEFMPNGSLGDFLHNEKIAEHFKDEMCRVLRIALLCVKNLPNNRPSMRLVVKFLLDIKGENKPKAMKITEALPAT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0326100 | RBH | 0.0 | 0.0 | 2.717942 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g15700 | RBH | 0.0 | 0.0 | 0.686508 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0326100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0005680 | RBH | 0.0 | 0.500984 | 0.236543 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0005750 | RBH | 0.0 | 0.0 | 0.121818 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0005880 | RBH | 0.0 | 0.0 | 0.758418 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0005770 | RBH | 0.027229 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0005950 | RBH | 0.0 | 0.0 | 0.431751 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0170000 | RBH | 0.8751925 | 0.086232 | 0.9324865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0006110 | RBH | 0.0 | 0.0 | 0.093960 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0147500 | RBH | 0.141707 | 0.0362875 | 3.077608 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0005890 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0005780 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0005740 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0005620 | RBH | 0.0 | 0.0 | 0.087900 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0012090 | SBH | 0.687408 | 10.825159 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G006020 | RBH | 0.0 | 0.0 | 0.473311 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0005880 | RBH | 0.0 | 0.0 | 1.020753 |
