Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_08g0024550 | OGI:08079380 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr08:29094656-29098012 | ||||||||
| Gene Symbol | MDHAR4, OsMDAR4, MDAR4, OsMDHAR4 | ||||||||||
| DNA seq | ggagagagaggaagcgagacggaagcagcaaacctttccttcctccgatcgatcgagctaatgcctcgtcactccatcgtcggttcggtcgtatAaaaagcaagcgagcgaggcactttcctcccttgctcccaccagcacacctgtcctccttcccctccatcgtcgtctccctcctcttgtcccactccgactccgacatggcggccgcgaagcacttcacctacgtcatcctcggcggcggcgtcgccgcggtagcatcgccaccctcctcctctactctcttcaatacgcgcttgccttctcagggccatcacatcatctcactcacacgatcgatgaactcattttcattttgatttgtgcagggatacgctgcgcgggagttcgccaagcagggcgtcaagcccggggaactcgccatcatctccaaggaatcggtaaaccatccatccatccatccatcgattccttcctgaatgaatactggactagtaattcctaattatttttttttcctcttcgtgtttctgctgcaggtggctccctacgagcgtcctgctctcagcaagggatacctctttcctcagagtacgtcacgccctcccctcccctcccctgccctgcatatttattttattttctcaacatactactaattactctcttccatttcttgctgctgattcattccgatccatctttctctctacagatgcagccaggcttccgggattccacacctgcgtcgggagcggcggagagaggctcttgcctgaatggtattccgagaaaggtacaattactgcttttttttctcttttcttttccatataatttgcaatctgcagttgctgttcgatcttcatgccagagtactttgttgattgcaaattgcaatggtgatcgtctatgcaatggttatccatgagttcttctggtcacttcacaaacccgttgccgtacattaattcacaggctttcagtgccagactgccagtagtactaacttggaagctaaccaaaccttcaaaaaacttgaaaagtaccagtagtagtattttataactcaagtgtcgtttcattaattctatcctctgatctctgatccttttcgagtaaacaaaggaatgccagctaatttaaatggccaaaaatattcctctataaataaaattgctaaaagtcaccattttctgaataccgcagtctttctgacagattgatggcaaactgaatgagagagtatatggtgtttccatttgtaatgttgcaggtatcgagctgatcctgagcaccgaaattgtcaaggctgatcttgcctccaagacattgaccagttcagctgatgcaacctttacctatgacactttgctcattgccactggctcctcggtgagttctcaactgtacctttaagctttaacccacaaagaaaagAGGAatggtgttctttttagtaaattttggttgtgaacttgtaatgtttgtttattcatatcggtttttccagagctatgttgctcatgtcatttttttgggaatacgcgagacgcggatttttgtattaagatgttgctcatgtcatgaacatctgtctgcttgatcaggtcataaagctcactgactttggtgttcaaggagcagaggccaacgacatattgtacctgagggatattgaggacgctgacaagttggtcgcggctatgcaagccaagaaggatggaaaggctgtggttgttggaggtggctacataggacttgagcttagcgcagccttgaagaccaacaattttgatgtcactatggtgtaccctgaaccttggtgcagtaagtctccttattctttgcatccagaaagctttactactataaattgtgttttctgaatactcaacagcaaggaaacaaatacctctcatctttatagttgtaacgtatttggccaatgaaatctcatattggagatgccatctgttgtagtgccccgtctcttcacttctggccttgctgctttctacgagggatactacgctaacaaaggaatccatatcataaagggaaccgtggctgttggttttgatgctgatgccaatggagatgtgagcactctgtagttaccacttagtccagtatcatcttgctgtgaaggcaaatgttcaccttgttaattttttttttctgttggcaggttactgcggtgaagctaaagaatggaaacgtgctggaagctgacattgttattgtcggtgtcggtggcaggccactgactcatctcttcaagggtcaagttgcagaggagaagggtggaataaaggtttgtccggtttctgttcatctttcagattctgctctatctgctacatttgttgcgtgatgattgtatttcaggctattgtccatttgagtcaccctaattagcaactgaaccttctttcgagcttgttcttgcttataccttcgaattagctgaacaattcaaatctgcatgtgtcttccagactgatgcattcttcgaaacgagcgttcctggtgtatacgccattgccgacgtggccgccttcccgatgaagatatacaatgagattaggagagtaGagcatgttgaccatgctcgcaaatcagccgagcaggccgtgaaggtgagccatccgttcgttcttgattcttcatcctcgttgccgccattgatccggattcagaagttctttgtgataaccaaattcactggcttcaatgaacttgcaggcgatcaaggcgaaggaggccggcgagtcggtgccggagtacgactacctgccctacttctactcccggtcgttcgacctctcgtggcagttctacggcgacaacgtcggcgaggatgtgctgttcggcgacaacgaccccacggcggccaagcccaagttcggctcgtactggatcaaggacggcaaggtcgtcggcgtcttcctcgaaggcggctcggcggaggagaatcaggtcattgccaaggtcgccagagctcagccgccggtggccgacgtcgaggctctcaagaaggaaggactcgacttcgctgccaaagtctgaacctctctatgcacacgcatttcattttgtggacgctgtgatgctgccatcttttcgattctgagcttcgtagtgattttgttagctccgatcctatatatggaggatttgttttgttctcattgtgaatttgtgatgtagtcactgtggcgaggtcccaataatgtctgtactctgtagcttctgtgattagttgttttctttttaaaaaaacctgtgtatcgtctgtgtttcttttttttatcacggattaggctgttctttgctagttacttaagaagattt
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| CDS seq | atggcggccgcgaagcacttcacctacgtcatcctcggcggcggcgtcgccgcgggatacgctgcgcgggagttcgccaagcagggcgtcaagcccggggaactcgccatcatctccaaggaatcggtggctccctacgagcgtcctgctctcagcaagggatacctctttcctcagaatgcagccaggcttccgggattccacacctgcgtcgggagcggcggagagaggctcttgcctgaatggtattccgagaaaggtatcgagctgatcctgagcaccgaaattgtcaaggctgatcttgcctccaagacattgaccagttcagctgatgcaacctttacctatgacactttgctcattgccactggctcctcggtgagttctcaactcactgactttggtgttcaaggagcagaggccaacgacatattgtacctgagggatattgaggacgctgacaagttggtcgcggctatgcaagccaagaaggatggaaaggctgtggttgttggaggtggctacataggacttgagcttagcgcagccttgaagaccaacaattttgatgtcactatggtgtaccctgaaccttggtgcatgccccgtctcttcacttctggccttgctgctttctacgagggatactacgctaacaaaggaatccatatcataaagggaaccgtggctgttggttttgatgctgatgccaatggagatgttactgcggtgaagctaaagaatggaaacgtgctggaagctgacattgttattgtcggtgtcggtggcaggccactgactcatctcttcaagggtcaagttgcagaggagaagggtggaataaagactgatgcattcttcgaaacgagcgttcctggtgtatacgccattgccgacgtggccgccttcccgatgaagatatacaatgagattaggagagtaGagcatgttgaccatgctcgcaaatcagccgagcaggccgtgaaggcgatcaaggcgaaggaggccggcgagtcggtgccggagtacgactacctgccctacttctactcccggtcgttcgacctctcgtggcagttctacggcgacaacgtcggcgaggatgtgctgttcggcgacaacgaccccacggcggccaagcccaagttcggctcgtactggatcaaggacggcaaggtcgtcggcgtcttcctcgaaggcggctcggcggaggagaatcaggtcattgccaaggtcgccagagctcagccgccggtggccgacgtcgaggctctcaagaaggaaggactcgacttcgctgccaaagtctga
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| Protein seq | MAAAKHFTYVILGGGVAAGYAAREFAKQGVKPGELAIISKESVAPYERPALSKGYLFPQNAARLPGFHTCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSSADATFTYDTLLIATGSSVSSQLTDFGVQGAEANDILYLRDIEDADKLVAAMQAKKDGKAVVVGGGYIGLELSAALKTNNFDVTMVYPEPWCMPRLFTSGLAAFYEGYYANKGIHIIKGTVAVGFDADANGDVTAVKLKNGNVLEADIVIVGVGGRPLTHLFKGQVAEEKGGIKTDAFFETSVPGVYAIADVAAFPMKIYNEIRRVEHVDHARKSAEQAVKAIKAKEAGESVPEYDYLPYFYSRSFDLSWQFYGDNVGEDVLFGDNDPTAAKPKFGSYWIKDGKVVGVFLEGGSAEENQVIAKVARAQPPVADVEALKKEGLDFAAKV |
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| Function | Monodehydroascorbate reductase 4, cytosolic [UniProtKB/Swiss-Prot:Q6ZJ08] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_08g0024550 | OsLaMu_08g0024550.01 | Chr08 | 29094656 | 29096074 | + | NAM | ||
| CDS seq | atggcggccgcgaagcacttcacctacgtcatcctcggcggcggcgtcgccgcgggatacgctgcgcgggagttcgccaagcagggcgtcaagcccggggaactcgccatcatctccaaggaatcggtggctccctacgagcgtcctgctctcagcaagggatacctctttcctcagaatgcagccaggcttccgggattccacacctgcgtcgggagcggcggagagaggctcttgcctgaatggtattccgagaaaggtatcgagctgatcctgagcaccgaaattgtcaaggctgatcttgcctccaagacattgaccagttcagctgatgcaacctttacctatgacactttgctcattgccactggctcctcggtgagttctcaactgtacctttaa
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| Protein seq | MAAAKHFTYVILGGGVAAGYAAREFAKQGVKPGELAIISKESVAPYERPALSKGYLFPQNAARLPGFHTCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSSADATFTYDTLLIATGSSVSSQLYL |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_08g0024550 | OsLaMu_08g0024550.02 | Chr08 | 29094768 | 29098012 | + | NAM | ||
| CDS seq | atggcggccgcgaagcacttcacctacgtcatcctcggcggcggcgtcgccgcgggatacgctgcgcgggagttcgccaagcagggcgtcaagcccggggaactcgccatcatctccaaggaatcggtggctccctacgagcgtcctgctctcagcaagggatacctctttcctcagaatgcagccaggcttccgggattccacacctgcgtcgggagcggcggagagaggctcttgcctgaatggtattccgagaaaggtatcgagctgatcctgagcaccgaaattgtcaaggctgatcttgcctccaagacattgaccagttcagctgatgcaacctttacctatgacactttgctcattgccactggctcctcggtgagttctcaactcactgactttggtgttcaaggagcagaggccaacgacatattgtacctgagggatattgaggacgctgacaagttggtcgcggctatgcaagccaagaaggatggaaaggctgtggttgttggaggtggctacataggacttgagcttagcgcagccttgaagaccaacaattttgatgtcactatggtgtaccctgaaccttggtgcatgccccgtctcttcacttctggccttgctgctttctacgagggatactacgctaacaaaggaatccatatcataaagggaaccgtggctgttggttttgatgctgatgccaatggagatgttactgcggtgaagctaaagaatggaaacgtgctggaagctgacattgttattgtcggtgtcggtggcaggccactgactcatctcttcaagggtcaagttgcagaggagaagggtggaataaagactgatgcattcttcgaaacgagcgttcctggtgtatacgccattgccgacgtggccgccttcccgatgaagatatacaatgagattaggagagtaGagcatgttgaccatgctcgcaaatcagccgagcaggccgtgaaggcgatcaaggcgaaggaggccggcgagtcggtgccggagtacgactacctgccctacttctactcccggtcgttcgacctctcgtggcagttctacggcgacaacgtcggcgaggatgtgctgttcggcgacaacgaccccacggcggccaagcccaagttcggctcgtactggatcaaggacggcaaggtcgtcggcgtcttcctcgaaggcggctcggcggaggagaatcaggtcattgccaaggtcgccagagctcagccgccggtggccgacgtcgaggctctcaagaaggaaggactcgacttcgctgccaaagtctga
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| Protein seq | MAAAKHFTYVILGGGVAAGYAAREFAKQGVKPGELAIISKESVAPYERPALSKGYLFPQNAARLPGFHTCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSSADATFTYDTLLIATGSSVSSQLTDFGVQGAEANDILYLRDIEDADKLVAAMQAKKDGKAVVVGGGYIGLELSAALKTNNFDVTMVYPEPWCMPRLFTSGLAAFYEGYYANKGIHIIKGTVAVGFDADANGDVTAVKLKNGNVLEADIVIVGVGGRPLTHLFKGQVAEEKGGIKTDAFFETSVPGVYAIADVAAFPMKIYNEIRRVEHVDHARKSAEQAVKAIKAKEAGESVPEYDYLPYFYSRSFDLSWQFYGDNVGEDVLFGDNDPTAAKPKFGSYWIKDGKVVGVFLEGGSAEENQVIAKVARAQPPVADVEALKKEGLDFAAKV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_08g0024550 | OsLaMu_08g0024550.03 | Chr08 | 29094783 | 29097933 | + | IsoSeq | ||
| CDS seq | tcccaccagcacacctgtcctccttcccctccatcgtcgtctccctcctcttgtcccactccgactccgacatggcggccgcgaagcacttcacctacgtcatcctcggcggcggcgtcgccgcgggatacgctgcgcgggagttcgccaagcagggcgtcaagcccggggaactcgccatcatctccaaggaatcggtggctccctacgagcgtcctgctctcagcaagggatacctctttcctcagaatgcagccaggcttccgggattccacacctgcgtcgggagcggcggagagaggctcttgcctgaatggtattccgagaaaggtatcg
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| Protein seq | SHQHTCPPSPPSSSPSSCPTPTPTWRPRSTSPTSSSAAASPRDTLRGSSPSRASSPGNSPSSPRNRWLPTSVLLSARDTSFLRMQPGFRDSTPASGAAERGSCLNGIPRKVS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.148505 | 29.745583 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0557600 | RBH | 8.146903 | 4.816399 | 28.029280 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g44340 | RBH | 5.358505 | 3.118700 | 7.022508 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0557600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0025230 | RBH | 0.692632 | 79.161819 | 31.252628 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0025000 | RBH | 1.807418 | 26.298199 | 27.709890 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0024990 | RBH | 1.951064 | 70.812279 | 46.187332 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0025240 | RBH | 0.467339 | 1.628390 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0025010 | RBH | 11.271621 | 73.146332 | 73.031311 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0444700 | RBH | 6.4431135 | 20.0012645 | 63.9356785 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0024790 | RBH | 0.054664 | 2.225753 | 8.029349 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0463600 | RBH | 10.02311 | 24.263284 | 20.011625 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0024210 | RBH | 0.365691 | 1.632554 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0024560 | RBH | 3.773008 | 52.691029 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0024360 | RBH | 14.339029 | 63.426216 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0025280 | RBH | 0.544865 | 3.786562 | 9.278520 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0020160 | RBH | 7.441263 | 39.135170 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G024710 | RBH | 0.087424 | 13.307052 | 10.395547 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0024870 | RBH | 1.505647 | 37.425747 | 49.997856 |
