Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_08g0023140 | OGI:08076870 | 15/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr08:28202089-28212328 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggaagcaacggtggtgagcgtggggaagtcggtgctggacggagcgctaagctatgccaaatccgccatcgcggaggaggtaactctgcagctcggcgtccagcaagaccagggcttcatcaaggacgagcttgagatgatgctgtctttcctgcgtgctgcagacaaagagcagggacacaatgaggtgttccagacatgggtgaagcaggtccgtgacgtcgcctacgacgtcgaggactgcctccaagactacgttgtccggttggagaaaccgtcctggtggcgaaggcgcctctcctgcacgacactgcgggagaggcatcgcatcgccaccgtgatgaaggagatgagaggcaaggttgaggatgtcagcctgagaaactcgcggtacaaactgcttggtggccctgcagctgcctcagagccttctccccttacggctgctgagctgcagtccaccaccttcgatgacattgaggctacgcgtgtcgccaagcagcaagaaaagatggacctcgtggatctcattactaaggacggcgatggccttcaagaaattgcagtgtggggaacaagtggtgctactggagtggcttccatcgtatgggtggcttatcaaaaggtgaaggacagatttccggaatgccatgcttgggtaaaagtgatgcatcccttcgatgccaaggagttcattgggagcttggtgaggcagtttaaagcaaactcccatgaggggactagcaacacaccacaaggaacaccttctggggtgtcggctctgaacgagatggaagcaaaagattataacttgcttgacgacttctgtaaatatgtggctaacaagaaatatttgattgcccttaatggcctgtgtaacatagaagagtgggactggataaaaacctatcttccaaacaaacataatggcagccgaatcctggtgtgcacgccgcaagctgaagttgcagtctgttggaaaaacaaggatgggtacaaggtgtctgaaattcgacaggaagggtcattcgtcacacctctttacgtcttctacgaggaagtaaaggttagtattactatctatatttatAttgtcatgtataggtttcactataaaatgttattttttagaaaccagcttctagttcactgtataacccaacgaggtttttttttttcaaaatgactacgaatcagatgctcaaattttccccaaaaatcggtcattgtttcaccccttatagaagaatgtttcaacgcttagtaaaagaatgtttcaactcttaaaaggagtgaaacacaatcggattgccagatgaaacaatttgcttcagcataagaaacaaatgatattaagccaaagcatttccgggttttttttcttgtgctttccccgtgaccgtggccgaggcactccctcgaacgagcctacatgtggcttatcccacacaaagagtctgctaacagggccacacactagctggcgtggctaggccacacacttgctaatcagtttgggctagtgtaatgtccttgaaaacgattttaggcccaaCtcgtttagttagaccacacctagaatttaactctcctccgcatcacgcaaaaagttcgaattgagagttaggaccagatggaggtagatatgtactaaacatattttaagaagataaataaggagagagaatagcagcgggctacatatttgtagccatctgtagcacggactccaagacacagtatttgtgtgacaggtgggaccaggtattaatagtgtagtatgcaactattgtatgaattagctattagattggctatagattaattggagctagtagttggctatactattaaacttgctctgattggatgcatatctataatatttcatattttctaacatgtatatcatttgaacacgcccgctggcaaacctgttaatttccttttgtgtctctggctctgtgctaattgtatctgttcatcatggttatacacaattacacattagaacatggtactaatgctcatcactgcaaattaagataaatgcattgttcacagaaacaacagttttacctaattgttgcttgtatatattcaggactctccaaccgaacaaactgacaagacaaagtccagctcaaacgccacagctagtacagagggtcgaaaaagcccacctgtgcctaacgaacgcaaggatccagagtcccaagttattgatctaatatccaaaggtgggcaggtgatcgctgtttggggaatggaaaatgatgttgtcagaaggactgctcttgtgaggaaagtgtatgagcgctctgttcactgcggatttctgaggcatgcttggtttggcatgacgcctcaattcaatcatgatgagctcgttacggagttggctcgcaagttgaatccagataactgcgaagacacttgcctcaaaaaaaaagaagacagtcgtcaagacacagaaGgctctactcatcgtaagcagcaagaagatggacagaacagtagtaataaatcaaaaaggggaaccaccgagtcgacaaggaactcattgaccacgattttatcggggcacaaatgcctccttgttttcgacaaaatatcttcaaatgcagaatgggactccataaggaagagccttcccattgagagcaattcagatagccggatcatagtcacaacaaaggattccaatgttgccatatactgttctggggaaaagcagtacacgtacaactacaagctaggaagccaaaatgatggaactgcggtatatatgctctactcaaaccctagtcaaaataggagtgtactactgtaattgtaccctccatgtctccaaccaaactaggagtaccatttcttatttctgaattggagtgcactcaactataaaagaatcttaattttgaaacaataatccagatctataggtgctatacagtagtaaataaagtcattaaacttcatttacctttggaagtaCccccttagtctcataatatcgcagcttttagctttttaaatttgttccagaatATAataatttcttcaccaacactctatgcttaaccaataacaatattcgctcatttaattttcccacctactttattttttcagtcaatcacaatattttcatatttaatttcacatacttttctcaacaattgtgtctaatcctaaatattttagggacggtggtagtatatcgctaaccttattgcctgttgacccttttttttttttcccaggtgggctctgagtcggttggtctagattccaatgagataaattcagagaccaagcctagcatggccagttcctctactggcggtgacaaccaccctgagggcctgcgtgaaagcagttcaccctctctcaacaaagattctaatgcggtcgtgaagaaactcacacgctgcacggcaatggtacccaaacgcagcaggacagtggtagccgctgaggaagctcagctcatgattggtagaagaaatgaaaaggataaacttatcaaaatgcttgattctggttgtgatgcgaaacatcgagtgatttcggtgtggggaatgggtggaattggcaaaaccactctcgtcaaaagcatctatcagagctccgagcttgagaagcttgggtttgagaggcgtgcttgggtacctgtatcgcgtccattccgacgtatcgagctccttaggatcttggctcagcggttagttaaagattcccccggaaagaaggtagaatctacaccaggacttgcaaggagtggtttaagcatgatgggatctaaagaattaattgacaagttgaagcaagatttaacagggaagaagtacctcattgtccttgatgacctatcgactactactgagtgggatttcataaaaacaatttttcctgaaaacagttctagccgcatcattgtcaccacaagacctaaattggttgcccaatattgctccgaggaagaagagtacatgcacagaatcggagatctaaaagataaagatgctcttgatctattcttagataaggtacatgttcccacctgtataatgacttatttttatcttttgagttcatgctctgcacaacttatatatgcatctcacaacatactgtcgagttgaaaagattgtgcttgtgcatcaatggtaataataagtgagtaaccatatacaccactacattttcttcccttccaatcacaaataagtgatgctttgaaacacgtgaaaatcaatgttttcaaaatttgaccattaatattgctatgAatatttgctttgattcaacttttgaaaaacttctctttaaaatagtttaaaaatattaccactttgctatattattttatactccatcccaaagagaatgcaactctagcattcaaattttgtcAaaaatatAtatattatggagtaatactttccccttcaatcaccactcattcagatttctccccattttatctctgaccaaccgcccaccaccgatcatctctaatttaatgagggcatcttaggtcatgttccttttcttttaatttatcttctgaatgttatatttttgggacgggagtagattttatataagtaattactaataacatgcttgtactaatgaccatgtcattgtctaaaaaatcacttatttgtgactggaaggagtagtttgattgtacatcaatgatagctgaataatcatatAtatgtccttacgttttgcagtttgtccaggcaattttttttTAatttttaaaaacaatattttaaaattagacatggcatacattcagtgtacagtaaaatttcacataataatttggttgaatttttatgtattttgtaagtaaattttttgttaagagatgataataaTttagtctacacatgcaaatctcaaatatatttttgcactgccctaaaatatatatatatatATTGaactcaattaattaacatttttccaatctaccactaaatgaataccatgttgaagttcaactacaaatcatttatgcatgcatgtatgtatgtctgtttacatatttcaataaagcaattgttgatgctgatcttcatattaatgtgtagcacctagtttaacatagatatgattcgctaaatctgaactatgattttagttcttaatatatttatttggtaattacaaggtaattacaacaatattatatactctttatgaatttaacttttttttcaaatttatcttaacatttatgtttaaaccaacatccacgattacttgctagtactaaattaattgtaccaacaaatagttatctaacatggaagttagttttgttttttctcaaaactttggtcatagttctaacaaATatatgtttttttccaagtttgtatttaaACTacctattattgatgtttTGtgtaattacagttctacTttttttaaaaaaaataaatactttgtcttcatatgagagcggatacaattctatcagccaaaaattggtgtgtgcctaaaggatttatctgtgggtttagtaagaaatgtatgtgtaacggaaatatgattaacatggcttgtatccagatcatatttatatctatgctaattgggtacaccgaaaaaattcttgtgttaattggataatattcaataaatctgccacctatcaaagtaggaccaaactatagaatatataaaaagaaaagccagcatcgattacatccagggtttgcaatttcaacaattttcgtgaaatttctagattttgagctggttcagaaggagattttgaattgaaattcaaatggttatgaaaacaagtgaattgaaaatactaaaaaaaatcctataaattatatggtattattaacaaatattgaatcacttgtctatttgaacctaagaatgagctatatagttttaaaaaaaggcacaaaggaccaaagagcccataaaggatcagccatttaactgaaattgaggggatatactcctccatccgttataatatgTtgatattatcaatttttctaaaacaataTtgaatttacatatAttgaacctcaatcatacaaccaatattgtataaaaaaggcacaataggccgaaattccataaatgttgggcccatttaaccaacacagagggatatatatttatccacacctttcatatattttatcggatatttttgcactaTttttataaattctgaacatttttctctatttcccatttccaaataatcgagagacttctgcatacaactgatatgcttccgaactttttatatcaattttccctttcatttttgctaggaaaaaaactaaatttcaatttggccaatcaaaattcaacgcttttcaatcaaattcgatcatcttccaacaaatttcaccctccaacttcaatcttctgtttttgaaattctctcgattttttttattttcactatttcgatgatactcacccttcggtgttcaattgaaagtgtaacctctggttacaactttctaattatcaattttaagtttcggaactaaattaataagttacgaaattgtgagtccaagagaggtaaaacctcatagttatttattctagattcttgaattattaaatcttgaaaactttgcatcgtcattcctaATatataaactaggttaaactatacgcgttgcttcagaagtttaatatgataataacaagtaaaaataatgtgtaaaatagctagacgacataaacttatataagttgatgtgcttTAtgataatttaaatagtatatagaatgatgatccaaATataaaagtaaggtgatgtggctttatgagagaagaaaaggaggaagataatttagacaatatattaatcatctaagagctagaaacaattgaggtgatatggcttgatgagagaagaaaaagagggagataatttgtaccatagattaatcatctaaggtctagaaataattgaggtgatatggcttaatcagagaagagagaaatgatattaggtaaatgaggatgaactatataggtacatagcatattataaaaataatggagatatatatattaaaatattatgtgaattatgtgggatgatGAtttaacatgctggtattttaaagctctaaaattcaataaattatagataatatagcatggttgcgtgaatttaagatgtaataattgttagtagatgatgatattgcatatttgcaaattgagttatggatatggtgggttgtaactttatagaaaggtaggattaatttatcaacaaacaataattaatgcttcaaaccaaggacaacttcaaatttatatttattgattatgatccctcattagatagaaattactaagtatttattttgaatttcaagaattattaaagtaagaaaatactaaaactcagatttcatgatgagtgaaaatttgtgcttattactttagtacttaattagtcatgaaaaactacaagtaagactccaaaacaggtacaactttctaatatactccttcctcgcataaataTttattgtttagtacactgtttggtcaaactttcgaacaaaattttgaaagtttgaccatcattaacatcacaaatgcttagtttataaggataaaataaatgtacgcatagatttgtctttaaacataccgtcatTAtatggtaaacttatttgatttcatcagcttgatctaattaaaattgatggtcaatatttgaccaaatcttgttctaaagaacaaatatataTgaCtagaggGAgtatgttagtgatttttgaaactatttaatcaaggaaaaactacaaattaggattcatgacaagtttagcttttaTttattaattattagtTAtatattttggaattattagattaagAaaaataataaataaaatgttctggttaattatatataataATATtataattattaagtttaaatatcatctttttggcctacgttgtttgagttcaagcaattggacaacaaaatttggcttcttccatcgagttagggtgcccaatactgcttggttaacctctttatacgaatccttggtttattaatggccgatggctctcttaaatatgatccttggttttaatccttgagcatcatccgtagtttagaattcttatattttcccctttaaagattacaataaaatcttctggtagttaactaagatttcagattttcaactggggctttattaaaaaaaagatgaaccAGtaaaagtttcttgtgcgagaaagagagatcttcatatattgtgtttaacttgttaagtgacattaatggcaggtatgtaagaaaggggatgaatctgaattgaagcctgacatgatggacatcctcaagaaaaaccctgacatgatggcagaagcagaactcattgtaaagaagtgtggccggcttccccttgccattgtggcggtgggtggTtttctgtccacaagacccccaaacattagggaatggagAaaattcagtgaccatatcagtacagaattggatgagaacccaagtctcgagatgataaagAaaatacttatctcaagctatgagggtttatcataccaccttaagtcttgcTttttgtatctgtcgattttccctgaaggccatgacatcaggtatggacggttattgaggcggtggattgcagagggttactcaagagcaaagagaaacaataatgctgagaaagaagcggaggaacagtttacagcccttctcaacaagagcatgatccaacagtcaagaacagttaccaccgggaagacaggtttctgccaagtccacgatctgatgcgtgaaatcagcattgcaaagtctgaagaagAaaatcttgttcttgttctagatgaacacagcatctcgagctctaaagataaagtacgacaccttgttataagccagagttggagcagagaacagaagaagaacaatgatatgcAaaatatagtggatgtctcgcatatacgatctctgacagtctttggggagtggaaatcatttttcctttctaagaagatgaggatgcttcgggtacttgaTttagaagacacagatggtcttgaggatcatgacattgtgccaattggaaagcttcatcatttaaagtacttgtctctaagaggatctgcaacaatcctcaatcttccaagttcctttggtaatctgttgaacctggagacactagatatcaggggaacatgggttacaaagttgccagcaaccattggtaggttacaaaacttgaaatacctccatgctggcatgccaccagatgatgaggatgacaccagaagctgggttccgactccgccatcggcaattttagaggcatttcgtgagtactggacaaaccaagaagaggttgggatgggaatcaagttatttgtatcagtactcatgTttttgatcagtggttggttgagaaatatggatctgtttggtgttaaagtgccaagacgaattggacgattgaggtccattcacacaCtgagcgtcgtcaacatttcacggggaaaggccatgctgaagaacctcaaaaagcttacccaattgcgaaagctaggcgtaactggcattaacaagaataactgcgaagaactctgttctgtcatcgtcaaACatggatgcttacaatccttattacttcgggcggagggtaaggatgggttagaaggttgtttggatggcttgtccccccctccaaaagaccttgagagcctccagttgtatggaaatctggtgaaattacccgaatgggttaaggagcttgaaaatctacaaaaattgagccttcggagcacgaatctggaggcggatgctaccatgcaagtgctcggaggcctaccaatgctcgacattctacgtctccaggacaaggcgtgcaaggagaatgaactacgtttccatcccgattgtttcacaaatctgagggcactggagcttatttcgtggggtagcctcaaatcagtgatatttgaagaagaagcgacccctaaacttgaggtgctactggtggaccattgttcgtccatagacgaagctGggtttcctgggatagaaaatcttgcaaccctgaaggaagtttcgctccaggattactactacactgaattcaagaaaaaactacagcagcaacttaacatgatcgagcccagaccaaatctaaggattctgtaa
More
|
||||||||||
| CDS seq | atggaagcaacggtggtgagcgtggggaagtcggtgctggacggagcgctaagctatgccaaatccgccatcgcggaggaggtaactctgcagctcggcgtccagcaagaccagggcttcatcaaggacgagcttgagatgatgctgtctttcctgcgtgctgcagacaaagagcagggacacaatgaggtgttccagacatgggtgaagcaggtccgtgacgtcgcctacgacgtcgaggactgcctccaagactacgttgtccggttggagaaaccgtcctggtggcgaaggcgcctctcctgcacgacactgcgggagaggcatcgcatcgccaccgtgatgaaggagatgagaggcaaggttgaggatgtcagcctgagaaactcgcggtacaaactgcttggtggccctgcagctgcctcagagccttctccccttacggctgctgagctgcagtccaccaccttcgatgacattgaggctacgcgtgtcgccaagcagcaagaaaagatggacctcgtggatctcattactaaggacggcgatggccttcaagaaattgcagtgtggggaacaagtggtgctactggagtggcttccatcgtatgggtggcttatcaaaaggtgaaggacagatttccggaatgccatgcttgggtaaaagtgatgcatcccttcgatgccaaggagttcattgggagcttggtgaggcagtttaaagcaaactcccatgaggggactagcaacacaccacaaggaacaccttctggggtgtcggctctgaacgagatggaagcaaaagattataacttgcttgacgacttctgtaaatatgtggctaacaagaaatatttgattgcccttaatggcctgtgtaacatagaagagtgggactggataaaaacctatcttccaaacaaacataatggcagccgaatcctggtgtgcacgccgcaagctgaagttgcagtctgttggaaaaacaaggatgggtacaaggtgtctgaaattcgacaggaagggtcattcgtcacacctctttacgtcttctacgaggaagtaaaggactctccaaccgaacaaactgacaagacaaagtccagctcaaacgccacagctagtacagagggtcgaaaaagcccacctgtgcctaacgaacgcaaggatccagagtcccaagttattgatctaatatccaaaggtgggcaggtgatcgctgtttggggaatggaaaatgatgttgtcagaaggactgctcttgtgaggaaagtgtatgagcgctctgttcactgcggatttctgaggcatgcttggtttggcatgacgcctcaattcaatcatgatgagctcgttacggagttggctcgcaagttgaatccagataactgcgaagacacttgcctcaaaaaaaaagaagacagtcgtcaagacacagaaGgctctactcatcgtaagcagcaagaagatggacagaacagtagtaataaatcaaaaaggggaaccaccgagtcgacaaggaactcattgaccacgattttatcggggcacaaatgcctccttgttttcgacaaaatatcttcaaatgcagaatgggactccataaggaagagccttcccattgagagcaattcagatagccggatcatagtcacaacaaaggattccaatgttgccatatactgttctggggaaaagcagtacacgtacaactacaagctaggaagccaaaatgatggaactgcgtcggttggtctagattccaatgagataaattcagagaccaagcctagcatggccagttcctctactggcggtgacaaccaccctgagggcctgcgtgaaagcagttcaccctctctcaacaaagattctaatgcggtcgtgaagaaactcacacgctgcacggcaatggtacccaaacgcagcaggacagtggtagccgctgaggaagctcagctcatgattggtagaagaaatgaaaaggataaacttatcaaaatgcttgattctggttgtgatgcgaaacatcgagtgatttcggtgtggggaatgggtggaattggcaaaaccactctcgtcaaaagcatctatcagagctccgagcttgagaagcttgggtttgagaggcgtgcttgggtacctgtatcgcgtccattccgacgtatcgagctccttaggatcttggctcagcggttagttaaagattcccccggaaagaaggtagaatctacaccaggacttgcaaggagtggtttaagcatgatgggatctaaagaattaattgacaagttgaagcaagatttaacagggaagaagtacctcattgtccttgatgacctatcgactactactgagtgggatttcataaaaacaatttttcctgaaaacagttctagccgcatcattgtcaccacaagacctaaattggttgcccaatattgctccgaggaagaagagtacatgcacagaatcggagatctaaaagataaagatgctcttgatctattcttagataaggtatgtaagaaaggggatgaatctgaattgaagcctgacatgatggacatcctcaagaaaaaccctgacatgatggcagaagcagaactcattgtaaagaagtgtggccggcttccccttgccattgtggcggtgggtggTtttctgtccacaagacccccaaacattagggaatggagAaaattcagtgaccatatcagtacagaattggatgagaacccaagtctcgagatgataaagAaaatacttatctcaagctatgagggtttatcataccaccttaagtcttgcTttttgtatctgtcgattttccctgaaggccatgacatcaggtatggacggttattgaggcggtggattgcagagggttactcaagagcaaagagaaacaataatgctgagaaagaagcggaggaacagtttacagcccttctcaacaagagcatgatccaacagtcaagaacagttaccaccgggaagacaggtttctgccaagtccacgatctgatgcgtgaaatcagcattgcaaagtctgaagaagAaaatcttgttcttgttctagatgaacacagcatctcgagctctaaagataaagtacgacaccttgttataagccagagttggagcagagaacagaagaagaacaatgatatgcAaaatatagtggatgtctcgcatatacgatctctgacagtctttggggagtggaaatcatttttcctttctaagaagatgaggatgcttcgggtacttgaTttagaagacacagatggtcttgaggatcatgacattgtgccaattggaaagcttcatcatttaaagtacttgtctctaagaggatctgcaacaatcctcaatcttccaagttcctttggtaatctgttgaacctggagacactagatatcaggggaacatgggttacaaagttgccagcaaccattggtaggttacaaaacttgaaatacctccatgctggcatgccaccagatgatgaggatgacaccagaagctgggttccgactccgccatcggcaattttagaggcatttcgtgagtactggacaaaccaagaagaggttgggatgggaatcaagttatttgtatcagtactcatgTttttgatcagtggttggttgagaaatatggatctgtttggtgttaaagtgccaagacgaattggacgattgaggtccattcacacaCtgagcgtcgtcaacatttcacggggaaaggccatgctgaagaacctcaaaaagcttacccaattgcgaaagctaggcgtaactggcattaacaagaataactgcgaagaactctgttctgtcatcgtcaaACatggatgcttacaatccttattacttcgggcggagggtaaggatgggttagaaggttgtttggatggcttgtccccccctccaaaagaccttgagagcctccagttgtatggaaatctggtgaaattacccgaatgggttaaggagcttgaaaatctacaaaaattgagccttcggagcacgaatctggaggcggatgctaccatgcaagtgctcggaggcctaccaatgctcgacattctacgtctccaggacaaggcgtgcaaggagaatgaactacgtttccatcccgattgtttcacaaatctgagggcactggagcttatttcgtggggtagcctcaaatcagtgatatttgaagaagaagcgacccctaaacttgaggtgctactggtggaccattgttcgtccatagacgaagctGggtttcctgggatagaaaatcttgcaaccctgaaggaagtttcgctccaggattactactacactgaattcaagaaaaaactacagcagcaacttaacatgatcgagcccagaccaaatctaaggattctgtaa
More
|
||||||||||
| Protein seq | MEATVVSVGKSVLDGALSYAKSAIAEEVTLQLGVQQDQGFIKDELEMMLSFLRAADKEQGHNEVFQTWVKQVRDVAYDVEDCLQDYVVRLEKPSWWRRRLSCTTLRERHRIATVMKEMRGKVEDVSLRNSRYKLLGGPAAASEPSPLTAAELQSTTFDDIEATRVAKQQEKMDLVDLITKDGDGLQEIAVWGTSGATGVASIVWVAYQKVKDRFPECHAWVKVMHPFDAKEFIGSLVRQFKANSHEGTSNTPQGTPSGVSALNEMEAKDYNLLDDFCKYVANKKYLIALNGLCNIEEWDWIKTYLPNKHNGSRILVCTPQAEVAVCWKNKDGYKVSEIRQEGSFVTPLYVFYEEVKDSPTEQTDKTKSSSNATASTEGRKSPPVPNERKDPESQVIDLISKGGQVIAVWGMENDVVRRTALVRKVYERSVHCGFLRHAWFGMTPQFNHDELVTELARKLNPDNCEDTCLKKKEDSRQDTEGSTHRKQQEDGQNSSNKSKRGTTESTRNSLTTILSGHKCLLVFDKISSNAEWDSIRKSLPIESNSDSRIIVTTKDSNVAIYCSGEKQYTYNYKLGSQNDGTASVGLDSNEINSETKPSMASSSTGGDNHPEGLRESSSPSLNKDSNAVVKKLTRCTAMVPKRSRTVVAAEEAQLMIGRRNEKDKLIKMLDSGCDAKHRVISVWGMGGIGKTTLVKSIYQSSELEKLGFERRAWVPVSRPFRRIELLRILAQRLVKDSPGKKVESTPGLARSGLSMMGSKELIDKLKQDLTGKKYLIVLDDLSTTTEWDFIKTIFPENSSSRIIVTTRPKLVAQYCSEEEEYMHRIGDLKDKDALDLFLDKVCKKGDESELKPDMMDILKKNPDMMAEAELIVKKCGRLPLAIVAVGGFLSTRPPNIREWRKFSDHISTELDENPSLEMIKKILISSYEGLSYHLKSCFLYLSIFPEGHDIRYGRLLRRWIAEGYSRAKRNNNAEKEAEEQFTALLNKSMIQQSRTVTTGKTGFCQVHDLMREISIAKSEEENLVLVLDEHSISSSKDKVRHLVISQSWSREQKKNNDMQNIVDVSHIRSLTVFGEWKSFFLSKKMRMLRVLDLEDTDGLEDHDIVPIGKLHHLKYLSLRGSATILNLPSSFGNLLNLETLDIRGTWVTKLPATIGRLQNLKYLHAGMPPDDEDDTRSWVPTPPSAILEAFREYWTNQEEVGMGIKLFVSVLMFLISGWLRNMDLFGVKVPRRIGRLRSIHTLSVVNISRGKAMLKNLKKLTQLRKLGVTGINKNNCEELCSVIVKHGCLQSLLLRAEGKDGLEGCLDGLSPPPKDLESLQLYGNLVKLPEWVKELENLQKLSLRSTNLEADATMQVLGGLPMLDILRLQDKACKENELRFHPDCFTNLRALELISWGSLKSVIFEEEATPKLEVLLVDHCSSIDEAGFPGIENLATLKEVSLQDYYYTEFKKKLQQQLNMIEPRPNLRIL |
||||||||||
| Function | Disease resistance protein Piks-2 [UniProtKB/Swiss-Prot:P0DO10] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_08g0023140 | OsLaMu_08g0023140.01 | Chr08 | 28202089 | 28212328 | + | NAM | ||
| CDS seq | atggaagcaacggtggtgagcgtggggaagtcggtgctggacggagcgctaagctatgccaaatccgccatcgcggaggaggtaactctgcagctcggcgtccagcaagaccagggcttcatcaaggacgagcttgagatgatgctgtctttcctgcgtgctgcagacaaagagcagggacacaatgaggtgttccagacatgggtgaagcaggtccgtgacgtcgcctacgacgtcgaggactgcctccaagactacgttgtccggttggagaaaccgtcctggtggcgaaggcgcctctcctgcacgacactgcgggagaggcatcgcatcgccaccgtgatgaaggagatgagaggcaaggttgaggatgtcagcctgagaaactcgcggtacaaactgcttggtggccctgcagctgcctcagagccttctccccttacggctgctgagctgcagtccaccaccttcgatgacattgaggctacgcgtgtcgccaagcagcaagaaaagatggacctcgtggatctcattactaaggacggcgatggccttcaagaaattgcagtgtggggaacaagtggtgctactggagtggcttccatcgtatgggtggcttatcaaaaggtgaaggacagatttccggaatgccatgcttgggtaaaagtgatgcatcccttcgatgccaaggagttcattgggagcttggtgaggcagtttaaagcaaactcccatgaggggactagcaacacaccacaaggaacaccttctggggtgtcggctctgaacgagatggaagcaaaagattataacttgcttgacgacttctgtaaatatgtggctaacaagaaatatttgattgcccttaatggcctgtgtaacatagaagagtgggactggataaaaacctatcttccaaacaaacataatggcagccgaatcctggtgtgcacgccgcaagctgaagttgcagtctgttggaaaaacaaggatgggtacaaggtgtctgaaattcgacaggaagggtcattcgtcacacctctttacgtcttctacgaggaagtaaaggactctccaaccgaacaaactgacaagacaaagtccagctcaaacgccacagctagtacagagggtcgaaaaagcccacctgtgcctaacgaacgcaaggatccagagtcccaagttattgatctaatatccaaaggtgggcaggtgatcgctgtttggggaatggaaaatgatgttgtcagaaggactgctcttgtgaggaaagtgtatgagcgctctgttcactgcggatttctgaggcatgcttggtttggcatgacgcctcaattcaatcatgatgagctcgttacggagttggctcgcaagttgaatccagataactgcgaagacacttgcctcaaaaaaaaagaagacagtcgtcaagacacagaaGgctctactcatcgtaagcagcaagaagatggacagaacagtagtaataaatcaaaaaggggaaccaccgagtcgacaaggaactcattgaccacgattttatcggggcacaaatgcctccttgttttcgacaaaatatcttcaaatgcagaatgggactccataaggaagagccttcccattgagagcaattcagatagccggatcatagtcacaacaaaggattccaatgttgccatatactgttctggggaaaagcagtacacgtacaactacaagctaggaagccaaaatgatggaactgcgtcggttggtctagattccaatgagataaattcagagaccaagcctagcatggccagttcctctactggcggtgacaaccaccctgagggcctgcgtgaaagcagttcaccctctctcaacaaagattctaatgcggtcgtgaagaaactcacacgctgcacggcaatggtacccaaacgcagcaggacagtggtagccgctgaggaagctcagctcatgattggtagaagaaatgaaaaggataaacttatcaaaatgcttgattctggttgtgatgcgaaacatcgagtgatttcggtgtggggaatgggtggaattggcaaaaccactctcgtcaaaagcatctatcagagctccgagcttgagaagcttgggtttgagaggcgtgcttgggtacctgtatcgcgtccattccgacgtatcgagctccttaggatcttggctcagcggttagttaaagattcccccggaaagaaggtagaatctacaccaggacttgcaaggagtggtttaagcatgatgggatctaaagaattaattgacaagttgaagcaagatttaacagggaagaagtacctcattgtccttgatgacctatcgactactactgagtgggatttcataaaaacaatttttcctgaaaacagttctagccgcatcattgtcaccacaagacctaaattggttgcccaatattgctccgaggaagaagagtacatgcacagaatcggagatctaaaagataaagatgctcttgatctattcttagataaggtatgtaagaaaggggatgaatctgaattgaagcctgacatgatggacatcctcaagaaaaaccctgacatgatggcagaagcagaactcattgtaaagaagtgtggccggcttccccttgccattgtggcggtgggtggTtttctgtccacaagacccccaaacattagggaatggagAaaattcagtgaccatatcagtacagaattggatgagaacccaagtctcgagatgataaagAaaatacttatctcaagctatgagggtttatcataccaccttaagtcttgcTttttgtatctgtcgattttccctgaaggccatgacatcaggtatggacggttattgaggcggtggattgcagagggttactcaagagcaaagagaaacaataatgctgagaaagaagcggaggaacagtttacagcccttctcaacaagagcatgatccaacagtcaagaacagttaccaccgggaagacaggtttctgccaagtccacgatctgatgcgtgaaatcagcattgcaaagtctgaagaagAaaatcttgttcttgttctagatgaacacagcatctcgagctctaaagataaagtacgacaccttgttataagccagagttggagcagagaacagaagaagaacaatgatatgcAaaatatagtggatgtctcgcatatacgatctctgacagtctttggggagtggaaatcatttttcctttctaagaagatgaggatgcttcgggtacttgaTttagaagacacagatggtcttgaggatcatgacattgtgccaattggaaagcttcatcatttaaagtacttgtctctaagaggatctgcaacaatcctcaatcttccaagttcctttggtaatctgttgaacctggagacactagatatcaggggaacatgggttacaaagttgccagcaaccattggtaggttacaaaacttgaaatacctccatgctggcatgccaccagatgatgaggatgacaccagaagctgggttccgactccgccatcggcaattttagaggcatttcgtgagtactggacaaaccaagaagaggttgggatgggaatcaagttatttgtatcagtactcatgTttttgatcagtggttggttgagaaatatggatctgtttggtgttaaagtgccaagacgaattggacgattgaggtccattcacacaCtgagcgtcgtcaacatttcacggggaaaggccatgctgaagaacctcaaaaagcttacccaattgcgaaagctaggcgtaactggcattaacaagaataactgcgaagaactctgttctgtcatcgtcaaACatggatgcttacaatccttattacttcgggcggagggtaaggatgggttagaaggttgtttggatggcttgtccccccctccaaaagaccttgagagcctccagttgtatggaaatctggtgaaattacccgaatgggttaaggagcttgaaaatctacaaaaattgagccttcggagcacgaatctggaggcggatgctaccatgcaagtgctcggaggcctaccaatgctcgacattctacgtctccaggacaaggcgtgcaaggagaatgaactacgtttccatcccgattgtttcacaaatctgagggcactggagcttatttcgtggggtagcctcaaatcagtgatatttgaagaagaagcgacccctaaacttgaggtgctactggtggaccattgttcgtccatagacgaagctGggtttcctgggatagaaaatcttgcaaccctgaaggaagtttcgctccaggattactactacactgaattcaagaaaaaactacagcagcaacttaacatgatcgagcccagaccaaatctaaggattctgtaa
More
|
|||||||
| Protein seq | MEATVVSVGKSVLDGALSYAKSAIAEEVTLQLGVQQDQGFIKDELEMMLSFLRAADKEQGHNEVFQTWVKQVRDVAYDVEDCLQDYVVRLEKPSWWRRRLSCTTLRERHRIATVMKEMRGKVEDVSLRNSRYKLLGGPAAASEPSPLTAAELQSTTFDDIEATRVAKQQEKMDLVDLITKDGDGLQEIAVWGTSGATGVASIVWVAYQKVKDRFPECHAWVKVMHPFDAKEFIGSLVRQFKANSHEGTSNTPQGTPSGVSALNEMEAKDYNLLDDFCKYVANKKYLIALNGLCNIEEWDWIKTYLPNKHNGSRILVCTPQAEVAVCWKNKDGYKVSEIRQEGSFVTPLYVFYEEVKDSPTEQTDKTKSSSNATASTEGRKSPPVPNERKDPESQVIDLISKGGQVIAVWGMENDVVRRTALVRKVYERSVHCGFLRHAWFGMTPQFNHDELVTELARKLNPDNCEDTCLKKKEDSRQDTEGSTHRKQQEDGQNSSNKSKRGTTESTRNSLTTILSGHKCLLVFDKISSNAEWDSIRKSLPIESNSDSRIIVTTKDSNVAIYCSGEKQYTYNYKLGSQNDGTASVGLDSNEINSETKPSMASSSTGGDNHPEGLRESSSPSLNKDSNAVVKKLTRCTAMVPKRSRTVVAAEEAQLMIGRRNEKDKLIKMLDSGCDAKHRVISVWGMGGIGKTTLVKSIYQSSELEKLGFERRAWVPVSRPFRRIELLRILAQRLVKDSPGKKVESTPGLARSGLSMMGSKELIDKLKQDLTGKKYLIVLDDLSTTTEWDFIKTIFPENSSSRIIVTTRPKLVAQYCSEEEEYMHRIGDLKDKDALDLFLDKVCKKGDESELKPDMMDILKKNPDMMAEAELIVKKCGRLPLAIVAVGGFLSTRPPNIREWRKFSDHISTELDENPSLEMIKKILISSYEGLSYHLKSCFLYLSIFPEGHDIRYGRLLRRWIAEGYSRAKRNNNAEKEAEEQFTALLNKSMIQQSRTVTTGKTGFCQVHDLMREISIAKSEEENLVLVLDEHSISSSKDKVRHLVISQSWSREQKKNNDMQNIVDVSHIRSLTVFGEWKSFFLSKKMRMLRVLDLEDTDGLEDHDIVPIGKLHHLKYLSLRGSATILNLPSSFGNLLNLETLDIRGTWVTKLPATIGRLQNLKYLHAGMPPDDEDDTRSWVPTPPSAILEAFREYWTNQEEVGMGIKLFVSVLMFLISGWLRNMDLFGVKVPRRIGRLRSIHTLSVVNISRGKAMLKNLKKLTQLRKLGVTGINKNNCEELCSVIVKHGCLQSLLLRAEGKDGLEGCLDGLSPPPKDLESLQLYGNLVKLPEWVKELENLQKLSLRSTNLEADATMQVLGGLPMLDILRLQDKACKENELRFHPDCFTNLRALELISWGSLKSVIFEEEATPKLEVLLVDHCSSIDEAGFPGIENLATLKEVSLQDYYYTEFKKKLQQQLNMIEPRPNLRIL
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0539900 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g42710 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0539900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0023850 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0023660 | RBH | 0.0 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0023640 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0023990 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0023650 | RBH | 0.0 | 0.0 | 0.256409 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0429300 | RBH | 0.117858 | 0.2633685 | 0.0294475 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0023480 | SBH | 4.683669 | 0.080726 | 3.291930 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0449300 | RBH | 0.114786 | 0.184841 | 0.00822 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0022840 | RBH | 0.0 | 0.080306 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0023240 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0023060 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0023890 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0016590 | SBH | 0.035632 | 0.248925 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G023310 | RBH | 7.032104 | 0.606513 | 1.433877 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0023500 | RBH | 0.0 | 0.0 | 0.0 |
