Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_08g0019710 | OGI:08069770 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr08:25471560-25473775 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | caatggtcaatcactggtggttcatctcgatactacaggacatatatacataatgaaaacaacaaacataattaagtaaaagaactacgtaaagacgcaacaatgtcctgctggaatacatactcacattttagatctctgtagggatatctctaccttatgaccactgtgcacatatatcagagaaggttttattctacttgtactatctagtgaagggctactgcacgtatgcaactattaccacggtagaacacaactgctcaggaataccgcttggttggcctacattactttatttcttctctaccattttaaaattggcaagaagtgcctagcctctgcgtcagccatgggttgcggcctgcagtttgcttttgatcttggaacatgctctggagcagatcctggaacttctcaaggaattggctccatttgttggcactcaagtctgataactttgcgaagctggagttgtgagggagcttctccttggcactatgattgccactataactattgctgttaattttagaagtaaccttgttcttcgcgacgccactatgagatttgcgtcttccactgaagctaagttcattggacgaaatggacaagtttgaggtggaaggagtccaagtagtaattggacttgtgcaggttcccacatcatccttgttgaactcattgttgtcatcttcatccacatattcatttacttcagctaattttgatggtggatccctagaattacctttgattggcctgatattgttggaaaatgatgcttcaaatgtagttgaatcatcctcagaatcgagatcaaactgagtggactcattgtcatcctctccttcaaaatcagcttgtggaagcagccactctctttcctcaacccaattccttgcctccatgcacaaaacctcaagatcacttggctcctcttctttcctagtgaattgcctgctcatcatctctcctatctcagacaagcaaaagccacaagccgcagcttccttaagaaatgttgttgagagaaccaacaccctaagacttgcctcatggatcgtatgcagctccatgcgaagcatttcagcatcttttatagggtctaggttcgtaatgtactcaagatcttcctcggagaaaggaatagatgcttgtggccaatggatccactcaaagtaagggtcctctaagctttctggaagacaaaggccatgatcaataggaataagttctgtttgtgtttcaaatctgctagcatcattataaagcttcctaacaagtatatttcctgcatgtctgtctgtgttgaagattctaatatcaagtataccaatcctatgaacagcagagacaggaaagcttgatgtaccatggtcactagcatcatagtcatgaggaataaactcttgcaaagacgcaagcttgctaaaagcttgtgttttgttgtcactagactttgttttatagtcaacaccctcattcatatggaacacgctatgggtgatctttaccagcatagtgggaggtacatttgcAaaattcttgtgatctagaagatatgcggcaacctctcgggaccctgtttcaccaacacgcactgattttttaagacctggtagtccaagagacttccctacaaaacctttaggattgtttggaccaaatggttcctcatcagttggcttaactattgcagcatgctcaccccacatgtctcggaaatagtaggcaccacccatcccactgctgatagctactggttcgatgcctttttcaattccccgaacaatatcatcaactaactgcttcattcttgcagaagggcttgtgcaccccacgatttcaatgactctactatcatcacagtgttgaacatcctttccatttggagagaggcaaggtgtggagcaacttctgtgcatgtgattcctagtgagaagcaatggagagtcattgcaaatgtagctgagatcattgttcaaaagttgatcaccacatgtcagtgaactctcttcagtgggaatattaagcgctaactgcagcttcttttttacggtgtgtgcattttctcctcgctccaattcaatgcccaagacagagcctttgtcagtttggacaaacacacgcttccaactaagtgatctcccctcaatttgattctttgaggagtaaccattgttgaatgtgtgatccggaactgcaacagccat
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| CDS seq | atggctgttgcagttccggatcacacattcaacaatggttactcctcaaagaatcaaattgaggggagatcacttagttggaagcgtgtgtttgtccaaactgacaaaggctctgtcttgggcattgaattggagcgaggagaaaatgcacacaccgtaaaaaagaagctgcagttagcgcttaatattcccactgaagagagttcactgacatgtggtgatcaacttttgaacaatgatctcagctacatttgcaatgactctccattgcttctcactaggaatcacatgcacagaagttgctccacaccttgcctctctccaaatggaaaggatgttcaacactgtgatgatagtagagtcattgaaatcgtggggtgcacaagcccttctgcaagaatgaagcagttagttgatgatattgttcggggaattgaaaaaggcatcgaaccagtagctatcagcagtgggatgggtggtgcctactatttccgagacatgtggggtgagcatgctgcaatagttaagccaactgatgaggaaccatttggtccaaacaatcctaaaggttttgtagggaagtctcttggactaccaggtcttaaaaaatcagtgcgtgttggtgaaacagggtcccgagaggttgccgcatatcttctagatcacaagaatttTgcaaatgtacctcccactatgctggtaaagatcacccatagcgtgttccatatgaatgagggtgttgactataaaacaaagtctagtgacaacaaaacacaagcttttagcaagcttgcgtctttgcaagagtttattcctcatgactatgatgctagtgaccatggtacatcaagctttcctgtctctgctgttcataggattggtatacttgatattagaatcttcaacacagacagacatgcaggaaatatacttgttaggaagctttataatgatgctagcagatttgaaacacaaacagaacttattcctattgatcatggcctttgtcttccagaaagcttagaggacccttactttgagtggatccattggccacaagcatctattcctttctccgaggaagatcttgagtacattacgaacctagaccctataaaagatgctgaaatgcttcgcatggagctgcatacgatccatgaggcaagtcttagggtgttggttctctcaacaacatttcttaaggaagctgcggcttgtggcttttgcttgtctgagataggagagatgatgagcaggcaattcactaggaaagaagaggagccaagtgatcttgaggttttgtgcatggaggcaaggaattgggttgaggaaagagagtggctgcttccacaagctgattttgaaggagaggatgacaatgagtccactcagtttgatctcgattctgaggatgattcaactacatttgaagcatcattttccaacaatatcaggccaatcaaaggtaattctagggatccaccatcaaaattagctgaagtaaatgaatatgtggatgaagatgacaacaatgagttcaacaaggatgatgtgggaacctgcacaagtccaattactacttggactccttccacctcaaacttgtccatttcgtccaatgaacttagcttcagtggaagacgcaaatctcatagtggcgtcgcgaagaacaaggttacttctaaaattaacagcaatagttatagtggcaatcatagtgccaaggagaagctccctcacaactccagcttcgcaaagttatcagacttgagtgccaacaaatggagccaattccttgagaagttccaggatctgctccagagcatgttccaagatcaaaagcaaactgcaggccgcaacccatggctgacgcagaggctaggcacttcttgccaattttaa
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| Protein seq | MAVAVPDHTFNNGYSSKNQIEGRSLSWKRVFVQTDKGSVLGIELERGENAHTVKKKLQLALNIPTEESSLTCGDQLLNNDLSYICNDSPLLLTRNHMHRSCSTPCLSPNGKDVQHCDDSRVIEIVGCTSPSARMKQLVDDIVRGIEKGIEPVAISSGMGGAYYFRDMWGEHAAIVKPTDEEPFGPNNPKGFVGKSLGLPGLKKSVRVGETGSREVAAYLLDHKNFANVPPTMLVKITHSVFHMNEGVDYKTKSSDNKTQAFSKLASLQEFIPHDYDASDHGTSSFPVSAVHRIGILDIRIFNTDRHAGNILVRKLYNDASRFETQTELIPIDHGLCLPESLEDPYFEWIHWPQASIPFSEEDLEYITNLDPIKDAEMLRMELHTIHEASLRVLVLSTTFLKEAAACGFCLSEIGEMMSRQFTRKEEEPSDLEVLCMEARNWVEEREWLLPQADFEGEDDNESTQFDLDSEDDSTTFEASFSNNIRPIKGNSRDPPSKLAEVNEYVDEDDNNEFNKDDVGTCTSPITTWTPSTSNLSISSNELSFSGRRKSHSGVAKNKVTSKINSNSYSGNHSAKEKLPHNSSFAKLSDLSANKWSQFLEKFQDLLQSMFQDQKQTAGRNPWLTQRLGTSCQF |
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| Function | Phosphatidylinositol 4-kinase gamma 6 [UniProtKB/Swiss-Prot:Q8W4R8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_08g0019710 | OsLaMu_08g0019710.01 | Chr08 | 25471560 | 25473775 | - | NAM | ||
| CDS seq | atggctgttgcagttccggatcacacattcaacaatggttactcctcaaagaatcaaattgaggggagatcacttagttggaagcgtgtgtttgtccaaactgacaaaggctctgtcttgggcattgaattggagcgaggagaaaatgcacacaccgtaaaaaagaagctgcagttagcgcttaatattcccactgaagagagttcactgacatgtggtgatcaacttttgaacaatgatctcagctacatttgcaatgactctccattgcttctcactaggaatcacatgcacagaagttgctccacaccttgcctctctccaaatggaaaggatgttcaacactgtgatgatagtagagtcattgaaatcgtggggtgcacaagcccttctgcaagaatgaagcagttagttgatgatattgttcggggaattgaaaaaggcatcgaaccagtagctatcagcagtgggatgggtggtgcctactatttccgagacatgtggggtgagcatgctgcaatagttaagccaactgatgaggaaccatttggtccaaacaatcctaaaggttttgtagggaagtctcttggactaccaggtcttaaaaaatcagtgcgtgttggtgaaacagggtcccgagaggttgccgcatatcttctagatcacaagaatttTgcaaatgtacctcccactatgctggtaaagatcacccatagcgtgttccatatgaatgagggtgttgactataaaacaaagtctagtgacaacaaaacacaagcttttagcaagcttgcgtctttgcaagagtttattcctcatgactatgatgctagtgaccatggtacatcaagctttcctgtctctgctgttcataggattggtatacttgatattagaatcttcaacacagacagacatgcaggaaatatacttgttaggaagctttataatgatgctagcagatttgaaacacaaacagaacttattcctattgatcatggcctttgtcttccagaaagcttagaggacccttactttgagtggatccattggccacaagcatctattcctttctccgaggaagatcttgagtacattacgaacctagaccctataaaagatgctgaaatgcttcgcatggagctgcatacgatccatgaggcaagtcttagggtgttggttctctcaacaacatttcttaaggaagctgcggcttgtggcttttgcttgtctgagataggagagatgatgagcaggcaattcactaggaaagaagaggagccaagtgatcttgaggttttgtgcatggaggcaaggaattgggttgaggaaagagagtggctgcttccacaagctgattttgaaggagaggatgacaatgagtccactcagtttgatctcgattctgaggatgattcaactacatttgaagcatcattttccaacaatatcaggccaatcaaaggtaattctagggatccaccatcaaaattagctgaagtaaatgaatatgtggatgaagatgacaacaatgagttcaacaaggatgatgtgggaacctgcacaagtccaattactacttggactccttccacctcaaacttgtccatttcgtccaatgaacttagcttcagtggaagacgcaaatctcatagtggcgtcgcgaagaacaaggttacttctaaaattaacagcaatagttatagtggcaatcatagtgccaaggagaagctccctcacaactccagcttcgcaaagttatcagacttgagtgccaacaaatggagccaattccttgagaagttccaggatctgctccagagcatgttccaagatcaaaagcaaactgcaggccgcaacccatggctgacgcagaggctaggcacttcttgccaattttaa
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| Protein seq | MAVAVPDHTFNNGYSSKNQIEGRSLSWKRVFVQTDKGSVLGIELERGENAHTVKKKLQLALNIPTEESSLTCGDQLLNNDLSYICNDSPLLLTRNHMHRSCSTPCLSPNGKDVQHCDDSRVIEIVGCTSPSARMKQLVDDIVRGIEKGIEPVAISSGMGGAYYFRDMWGEHAAIVKPTDEEPFGPNNPKGFVGKSLGLPGLKKSVRVGETGSREVAAYLLDHKNFANVPPTMLVKITHSVFHMNEGVDYKTKSSDNKTQAFSKLASLQEFIPHDYDASDHGTSSFPVSAVHRIGILDIRIFNTDRHAGNILVRKLYNDASRFETQTELIPIDHGLCLPESLEDPYFEWIHWPQASIPFSEEDLEYITNLDPIKDAEMLRMELHTIHEASLRVLVLSTTFLKEAAACGFCLSEIGEMMSRQFTRKEEEPSDLEVLCMEARNWVEEREWLLPQADFEGEDDNESTQFDLDSEDDSTTFEASFSNNIRPIKGNSRDPPSKLAEVNEYVDEDDNNEFNKDDVGTCTSPITTWTPSTSNLSISSNELSFSGRRKSHSGVAKNKVTSKINSNSYSGNHSAKEKLPHNSSFAKLSDLSANKWSQFLEKFQDLLQSMFQDQKQTAGRNPWLTQRLGTSCQF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0489800 | RBH | 0.0 | 0.0 | 0.902323 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g38200 | RBH | 0.0 | 0.0 | 0.232275 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0489800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0020290 | RBH | 0.0 | 0.0 | 1.138239 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0020210 | RBH | 0.0 | 0.0 | 1.008673 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0020080 | RBH | 0.0 | 0.0 | 5.109867 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0020280 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0020180 | RBH | 0.0 | 0.0 | 11.871621 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0385500 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0020050 | RBH | 0.0 | 0.0 | 0.777531 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0405800 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0019390 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0019660 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0019510 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0020360 | RBH | 0.0 | 0.0 | 0.682902 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0013780 | RBH | 0.166543 | 7.458966 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G019860 | RBH | 0.0 | 0.0 | 1.707806 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0020020 | RBH | 0.0 | 0.0 | 7.183229 |
