Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_08g0008350 | OGI:08025900 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr08:9038166-9038986 | ||||||||
| Gene Symbol | DGK6, OsSTA208, OsDGK6 | ||||||||||
| DNA seq | ctaacgatccccaccattgatgattagagatgggtaagggaccttcttgatatcgacgaacgtcgagtactcgtggtccaatggttgcttccatggctccccatccatttgcatgtatgcatccctccattgcccacctttgatctccaatcgtattgctgctgcctgaaaacagtaggtagcgtcgcttaaataattttgaggatatcagtgtcgaatgccatctggagttgtaatttgcaaagtagctgtttatctaaactgatgatgccttttcctgttgaactaagttgtaatacttcttttttttttttttttacctaatgtgatgtttgttcacaggtgacatagcgaaaaatttactattacatttttaacctttgagctccaaattgaacagtaatgcattaaaataccttctgctattcagatcttgtgcagggagcaaaagtacctgagctatgtgctttgcagatattagttcaaccatcacaagggatgcatgccacccttgcttcaatccaaatatttcaagaagacCATCGTCTGATTGAGCTTCGACAAATCCTCTCTGTTTACATAAAAAAGATAGAAGTTCTCTTGATGATATTCCAGTTAAGAAAAATAGCATGCTTTTTAGTATTTGCGAGGAAGTTCAGGCTATTGTGCTTTTCCAATTaaagcaatcataaaaatgacaagcaatttactcagcacaccttttccaagtattcaggcttcaagtttccccatggattccttccacttgcataattgtgaaggtttaatgcaacaatagccctgacactgaagtacaacat
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| CDS seq | atgttgtacttcagtgtcagggctattgttgcattaaaccttcacaattatgcaagtggaaggaatccatggggaaacttgaagcctgaatacttggaaaagAGAGGATTTGTCGAAGCTCAATCAGACGATGgtcttcttgaaatatttggattgaagcaagggtggcatgcatcccttgtgatggttgaactaatatctgcaaagcacatagctcaggcagcagcaatacgattggagatcaaaggtgggcaatggagggatgcatacatgcaaatggatggggagccatggaagcaaccattggaccacgagtactcgacgttcgtcgatatcaagaaggtcccttacccatctctaatcatcaatggtggggatcgttag |
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| Protein seq | MLYFSVRAIVALNLHNYASGRNPWGNLKPEYLEKRGFVEAQSDDGLLEIFGLKQGWHASLVMVELISAKHIAQAAAIRLEIKGGQWRDAYMQMDGEPWKQPLDHEYSTFVDIKKVPYPSLIINGGDR |
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| Function | Diacylglycerol kinase 4 [UniProtKB/Swiss-Prot:Q1PDI2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_08g0008350 | OsLaMu_08g0008350.01 | Chr08 | 9038166 | 9038986 | - | NAM | ||
| CDS seq | atgttgtacttcagtgtcagggctattgttgcattaaaccttcacaattatgcaagtggaaggaatccatggggaaacttgaagcctgaatacttggaaaagAGAGGATTTGTCGAAGCTCAATCAGACGATGgtcttcttgaaatatttggattgaagcaagggtggcatgcatcccttgtgatggttgaactaatatctgcaaagcacatagctcaggcagcagcaatacgattggagatcaaaggtgggcaatggagggatgcatacatgcaaatggatggggagccatggaagcaaccattggaccacgagtactcgacgttcgtcgatatcaagaaggtcccttacccatctctaatcatcaatggtggggatcgttag
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| Protein seq | MLYFSVRAIVALNLHNYASGRNPWGNLKPEYLEKRGFVEAQSDDGLLEIFGLKQGWHASLVMVELISAKHIAQAAAIRLEIKGGQWRDAYMQMDGEPWKQPLDHEYSTFVDIKKVPYPSLIINGGDR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0178700 | SBH | 1.253360 | 0.597315 | 5.821671 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g15090 | RBH | 0.265167 | 0.094558 | 0.415786 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0178700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0008660 | SBH | 0.000000 | 1.967857 | 0.796451 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0008690 | SBH | 0.000000 | 0.207169 | 0.596138 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0008790 | RBH | 0.000000 | 0.000000 | 2.794920 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0008660 | RBH | 0.068902 | 0.046416 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0008590 | RBH | 4.882185 | 6.669770 | 3.108916 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0143600 | RBH | 0.7145095 | 5.7936115 | 1.48347 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0008630 | RBH | 0.000000 | 0.000000 | 1.060666 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0137400 | RBH | 1.5259355 | 7.5724695 | 7.3889455 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0008160 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0008360 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0008190 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0008910 | RBH | 0.0 | 0.000000 | 1.701929 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0035830 | RBH | 0.400319 | 6.308087 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G008600 | RBH | 0.000000 | 0.0 | 2.459525 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0008390 | SBH | 0.0 | 3.711522 | 0.276961 |
