Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_08g0006080 | OGI:08003760 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr08:5656201-5660921 | ||||||||
| Gene Symbol | WRKY106, OsWRKY106, WRKY118, OsWRKY118 | ||||||||||
| DNA seq | ttaaaacgaagtgttcttatttccatcatccgcatcagctgttcctatttgatagtgcaagatcatttcaattagacacatcatagtgcaatatatgaagagtatatagccaagcatacaaagttgtaccagatgatttgatccagctttgggcacatataagtgcttctgttgtctcaggtcgcaattttccatcaaatagctccgcccgttgatcacactgatcaaatgcagattcagtagaaactgcacatccaggtattgctaaaatatcgcgtgccatcatagcaagagttgggtatgcagatgagttacccctccaccatttcagaatatcaaaagaatcgtcttgagtacagagtcccccaccaagatattcataaagctctttgaattcctcaactgcagcttgggctgtggtagaattctggcccttgttatgtaatggagcactaatttgtatatctgaacaattgttcttgtgatccaatatctccttactttgctcattcacataagagtattgaatgtatagctcatgaagctttgcacgcacgtcggagaaatacattccagcaacatggctaaaagcttgcctgaagcaaagttcaatgaatccgagtttatatctgggatctagaaccacagctatcgacagccacaagtaccacttcttccaatttctgtcaaatttcttctgcatatatgccacatcaaaaactcttccaatattttttatactaggcagttcttgtatagctgctctcaagctccagatcacatggaagtatgaattaaatgtcatattgtgaggaccagaaactacttttattacacgataggctgaccttgcaatcttgcaatagttctctgttgcttcgagatcatcaaaagatggctcccaaggacctgattggcaatttggtttagcatctggaagtggaaatgatttgatgaactgcaaagcagcctcagaaaaatagaatgtgaagtaccagccttttgatccgagagagggacggtctagatgcagctgtgatagaatttcctgaaatttctgcttacgctctggggagcttgtcatgtaatgagaccatgtcgattccatgtccaaaacggtggagtccataagttcatgaagggcatctaccatacaagggatacttaatagcctgcatttggaaagaaggtagttccttcctgtaatgtcatcctccaagtgtaatggagctttcttatccactgatcgctgtagtgtcactcctaaaagcttatccaaaagaccccaatcttgaactacttcctttaacaccttctcagcaagaacaatgtcagattgccaatgcgggtacaagcttaaaatatcagacttgccaaatactgaaagagaacatcttattgtttttctattgatcttccagtcctcatctataaaatgcacagttaaacaagcaactcttacttgaatgtaaaataaccgctgccactcgcctagtgacaggaaaactcccccaggtgtagctgttattttctccttcagcttcatcttttcgttatgaaaaacactaagaaacttttcctcaacggtagcttgctgcaacatgttaagaaccggatttctaccagctagaaactgtgcaaagcttgcactgtacatggcagagaaggggcaaaggtttgagactattgacctaataatctcgtcaagagaactttcttgatcatctttccagctctttacaataggtagatcagccagtgaagaacattttttctgaaccctactggttccatgctgtgcaggacagatcttcaagtgtcgtattaggtgactggttcctcctgaagtttttgcactgaggccttttttacaatgcttacattcagcggtttgaacctttccatcaattaacacaacttcaaattcctcccacaccgtggacttagatcgcacctttttcctggcatcaacatatatatagcattactaactaattgtgctccaacgtactctttatcattatttctttatttaaaccaaaacatacattgcatatgaaaaatacaaaattagttataatgcatcaaactggtcatgtttttcactacacatcattagtgccgcgcgatagaatttatttttttAaaaaaaggtaattagtgcgcaaagataggattgcacttaggagacaggattgtttgtaatatttctgtcatgcatctagcactatcaagaagtaatggcctgtgaataataagttaactaaaagaataaaacatgcaaagccctgcaagatacagtacttgacatgaagttatttgaaaggcatgagggaactcaatcgcatcgctataggtgagagttaaaataaggggaaaggaggttgtgagagaatgtatgtgcagaatttacagtgtgattattgattaccttggttgtgggttttcatgacgaacactgttattcaaaatatcaacctcacatgcagagtgcacagtgatctctttggctggagctgggacctgtccgctgagtaaaagtgcaacatgtcaataagaaaagcaaaaatatttaggacaaactatgtatattcaattttatggaagttggtttgttgccacttttaaccctactaaattttaataggataataaatcaaacatattttaaccattggtatcctacaaaactttggtactccaaaagtttctactcataaaaactatatcaaaatttggtaagtgttcaaaccaaaaacatcccaacaataccaaaatttgttaatgctaaagtatgtttggtgggattggtttggcaacaaactaaacagccccttgatccctgtccccaaggtaccatttatacaattatacatcatagcttaaaaaataaactgaggaagtaagaaaagaaactaccttttcactgcattggcatcaccaacagaagcattcccatcaattcctaaatcaccatcatcgtctctgcagctatcacttgaaccagacgactggccgtgcccatttcccgtcccaggcactgaaggtccaccagcagctcctgaggcatctgatgcctcaagtagcacaatttcttgagaaataggctccaatcgctctgaaccatctccgagccaccttagtgactgtcgtgggtggttgtgacagcccttgcaaactgtttcgatggtctgtccatctgcagagcgtgttatcgatttccggaccccgcagtttggtagggcacattgataggagaataccgttggacacaatccaccctgaattgtactctgcccacacatcctccagtggaatccatcatcagctacatctatgttaccataatatgcatgagacggcagagctgccacttgaattactggcgtgctggatgaggagcccacatgctgctgcatggtagtagaaggcgccaacatgaatggtgagaaagggtggaatccttggtcagccatggcgtacagcggttgtcctgattgattctccatatcctatttgctttccaactaggcaaccctgtagaaaaaagacagagattgatatcaccatttccagtattgcattggaaatcttatgtagatactgccgtactaaaatgagatggaatttgatgcacaaacttatactatatatatcaactagtttatgaaggcctatcaaaagaaaaaaagaaagaaagaaaatcgacggacctaaagcttttttatttactaaaaaaaaaactcccaccgtcccaaaatatagtgacttttgaacggataggacaatactacaaatctggacagggatctgttatattgggatggaggtagtatctaactatggaaaatattactgtgataaataacatcttcaatccttatcgtacatataatcgatgagcctggacggtacattaaacttcatttcaatataagaacaagaatagaacaattaaaaaaaaaagagaagaaggtaatttttggcagtagatgggttttattaaatcaaaattgtggttcgaattagaattttgactcattgtaagcatttttcattgtcgagtcatagtaattgcatctattaaataaactaagagttatggaaatgaattcatatggaagataaaagtcggttgctaaatgaatcagttgtgtagaaaaaaaaactgatgtgaaatcaaagatgatgataaaacgattgggaaaagaaagttgatcaacaaattacctataatatttatggttgcaagaaatccgaagcaatcagcgatcgccaacaagagatcggaacaacacggcgagcaatctctatggagtcaactaaagtcttgtcagggtcagggtggaggtagcgcactgccctgctcgctcaagccgccggggcggaaggtgcggtgagtcagtcgtcgcccagttcatatacaagtgactaagtgagtggccaaatttggcgctatcggtgacagtgcgccatgtccccccacggcgaatctgcgcactttaacccttgtctttctccctgtttggatcgagtccgagatggagccagctagccaggtaggtacaggagcttggaagatgctgacctgcacacgatccaaaggaaggaatagatacttccaacatggggaggcgtcgccatttctgtctccggtacgaggcggcggcggagtcgccatttctgtctgcgaggaggaggcggcggcggcggcggcgccc
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| CDS seq | atggagaatcaatcaggacaaccgctgtacgccatggctgaccaaggattccaccctttctcaccattcatgttggcgccttctactaccatgcagcagcatgtgggctcctcatccagcacgccagtaattcaagtggcagctctgccgtctcatgcatattatggtaacatagatgtagctgatgatggattccactggaggatgtgtgggcagagtacaattcagggtggattgtgtccaacggtattctcctatcaatgtgccctaccaaactgcggggtccggaaatcgataacacgctctgcagatggacagaccatcgaaacagtttgcaagggctgtcacaaccacccacgacagtcactaaggtggctcggagatggttcagagcgattggagcctatttctcaagaaattgtgctacttgaggcatcagatgcctcaggagctgctggtggaccttcagtgcctgggacgggaaatgggcacggccagtcgtctggttcaagtgatagctgcagagacgatgatggtgatttaggaattgatgggaatgcttctgttggtgatgccaatgcagtgaaaagtgttcgtcatgaaaacccacaaccaaggaaaaaggtgcgatctaagtccacggtgtgggaggaatttgaagttgtgttaattgatggaaaggttcaaaccgctgaatatgaagctgaaggagaaaataacagctacacctgggggagttttcctgtcactaggcgagtggcagcggttattttacattcaaatgaggactggaagatcaatagaaaaacaataagatgttctctttcagtatttggcaagtctgatattttaagcttgtacccgcattggcaatctgacattgttcttgctgagaaggtgttaaaggaagtagttcaagattggggtcttttggataagcttttaggagtgacactacagcgatcagtggataagaaagctccattacacttggaggatgacattacaggaaggaactaccttctttccaaatgcaggctattaagtatcccttgtatggtagatgcccttcatgaacttatggactccaccgttttggacatggaatcgacatggtctcattacatgacaagctccccagagcgtaagcagaaatttcaggaaattctatcacagctgcatctagaccgtccctctctcggatcaaaaggctggtacttcacattctatttttctgaggctgctttgcagttcatcaaatcatttccacttccagatgctaaaccaaattgccaatcaggtccttgggagccatcttttgatgatctcgaagcaacagagaactattgcaagattgcaaggtcagcctatcgtgtaataaaagtagtttctggtcctcacaatatgacatttaattcatacttccatgtgatctggagcttgagagcagctatacaagaactgcctagtataaaaaatattggaagagtttttgatgtggcatatatgcagaagaaatttgacagaaattggaagaagtggtacttgtggctgtcgatagctgtggttctagatcccagatataaactcggattcattgaactttgcttcaggcaagcttttagccatgttgctggaatgtatttctccgacgtgcgtgcaaagcttcatgagctatacattcaatactcttatgtgaatgagcaaagaacagctgatgcggatgatggaaataagaacacttcgttttaa
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| Protein seq | MENQSGQPLYAMADQGFHPFSPFMLAPSTTMQQHVGSSSSTPVIQVAALPSHAYYGNIDVADDGFHWRMCGQSTIQGGLCPTVFSYQCALPNCGVRKSITRSADGQTIETVCKGCHNHPRQSLRWLGDGSERLEPISQEIVLLEASDASGAAGGPSVPGTGNGHGQSSGSSDSCRDDDGDLGIDGNASVGDANAVKSVRHENPQPRKKVRSKSTVWEEFEVVLIDGKVQTAEYEAEGENNSYTWGSFPVTRRVAAVILHSNEDWKINRKTIRCSLSVFGKSDILSLYPHWQSDIVLAEKVLKEVVQDWGLLDKLLGVTLQRSVDKKAPLHLEDDITGRNYLLSKCRLLSIPCMVDALHELMDSTVLDMESTWSHYMTSSPERKQKFQEILSQLHLDRPSLGSKGWYFTFYFSEAALQFIKSFPLPDAKPNCQSGPWEPSFDDLEATENYCKIARSAYRVIKVVSGPHNMTFNSYFHVIWSLRAAIQELPSIKNIGRVFDVAYMQKKFDRNWKKWYLWLSIAVVLDPRYKLGFIELCFRQAFSHVAGMYFSDVRAKLHELYIQYSYVNEQRTADADDGNKNTSF |
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| Function | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot:Q6AVI0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_08g0006080 | OsLaMu_08g0006080.01 | Chr08 | 5656201 | 5660921 | - | NAM | ||
| CDS seq | atggagaatcaatcaggacaaccgctgtacgccatggctgaccaaggattccaccctttctcaccattcatgttggcgccttctactaccatgcagcagcatgtgggctcctcatccagcacgccagtaattcaagtggcagctctgccgtctcatgcatattatggtaacatagatgtagctgatgatggattccactggaggatgtgtgggcagagtacaattcagggtggattgtgtccaacggtattctcctatcaatgtgccctaccaaactgcggggtccggaaatcgataacacgctctgcagatggacagaccatcgaaacagtttgcaagggctgtcacaaccacccacgacagtcactaaggtggctcggagatggttcagagcgattggagcctatttctcaagaaattgtgctacttgaggcatcagatgcctcaggagctgctggtggaccttcagtgcctgggacgggaaatgggcacggccagtcgtctggttcaagtgatagctgcagagacgatgatggtgatttaggaattgatgggaatgcttctgttggtgatgccaatgcagtgaaaagtgttcgtcatgaaaacccacaaccaaggaaaaaggtgcgatctaagtccacggtgtgggaggaatttgaagttgtgttaattgatggaaaggttcaaaccgctgaatatgaagctgaaggagaaaataacagctacacctgggggagttttcctgtcactaggcgagtggcagcggttattttacattcaaatgaggactggaagatcaatagaaaaacaataagatgttctctttcagtatttggcaagtctgatattttaagcttgtacccgcattggcaatctgacattgttcttgctgagaaggtgttaaaggaagtagttcaagattggggtcttttggataagcttttaggagtgacactacagcgatcagtggataagaaagctccattacacttggaggatgacattacaggaaggaactaccttctttccaaatgcaggctattaagtatcccttgtatggtagatgcccttcatgaacttatggactccaccgttttggacatggaatcgacatggtctcattacatgacaagctccccagagcgtaagcagaaatttcaggaaattctatcacagctgcatctagaccgtccctctctcggatcaaaaggctggtacttcacattctatttttctgaggctgctttgcagttcatcaaatcatttccacttccagatgctaaaccaaattgccaatcaggtccttgggagccatcttttgatgatctcgaagcaacagagaactattgcaagattgcaaggtcagcctatcgtgtaataaaagtagtttctggtcctcacaatatgacatttaattcatacttccatgtgatctggagcttgagagcagctatacaagaactgcctagtataaaaaatattggaagagtttttgatgtggcatatatgcagaagaaatttgacagaaattggaagaagtggtacttgtggctgtcgatagctgtggttctagatcccagatataaactcggattcattgaactttgcttcaggcaagcttttagccatgttgctggaatgtatttctccgacgtgcgtgcaaagcttcatgagctatacattcaatactcttatgtgaatgagcaaagaacagctgatgcggatgatggaaataagaacacttcgttttaa
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| Protein seq | MENQSGQPLYAMADQGFHPFSPFMLAPSTTMQQHVGSSSSTPVIQVAALPSHAYYGNIDVADDGFHWRMCGQSTIQGGLCPTVFSYQCALPNCGVRKSITRSADGQTIETVCKGCHNHPRQSLRWLGDGSERLEPISQEIVLLEASDASGAAGGPSVPGTGNGHGQSSGSSDSCRDDDGDLGIDGNASVGDANAVKSVRHENPQPRKKVRSKSTVWEEFEVVLIDGKVQTAEYEAEGENNSYTWGSFPVTRRVAAVILHSNEDWKINRKTIRCSLSVFGKSDILSLYPHWQSDIVLAEKVLKEVVQDWGLLDKLLGVTLQRSVDKKAPLHLEDDITGRNYLLSKCRLLSIPCMVDALHELMDSTVLDMESTWSHYMTSSPERKQKFQEILSQLHLDRPSLGSKGWYFTFYFSEAALQFIKSFPLPDAKPNCQSGPWEPSFDDLEATENYCKIARSAYRVIKVVSGPHNMTFNSYFHVIWSLRAAIQELPSIKNIGRVFDVAYMQKKFDRNWKKWYLWLSIAVVLDPRYKLGFIELCFRQAFSHVAGMYFSDVRAKLHELYIQYSYVNEQRTADADDGNKNTSF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 3.649435 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0198100 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g09900 | RBH | 0.044767 | 0.097453 | 0.317051 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0198100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0006400 | RBH | 0.110099 | 4.927837 | 1.164720 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0006370 | RBH | 0.0 | 0.466352 | 0.071566 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0006480 | RBH | 0.189194 | 0.000000 | 0.594877 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0006350 | RBH | 0.022457 | 0.143964 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0006230 | RBH | 0.524974 | 3.670893 | 0.447050 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0087400 | RBH | 0.9421855 | 8.076227 | 1.6383445 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0006090 | RBH | 0.027792 | 0.039670 | 0.021329 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0090500 | SBH | 1.9032635 | 16.100136 | 9.5589895 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0006060 | RBH | 0.0 | 0.026050 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0006110 | RBH | 0.059608 | 1.607182 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0006050 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0006230 | RBH | 0.0 | 0.768632 | 0.295667 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0006070 | SBH | 0.0 | 2.270802 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G006080 | RBH | 0.103327 | 0.370052 | 0.702606 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0005960 | SBH | 0.275209 | 12.317497 | 0.911065 |
