Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_08g0001520 | OGI:08002980 | 1/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr08:1336181-1336661 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gtctttttgtggatataactaatgtgattaatgccaagttgacaaataagcatgccgcggttatccaaagtgaaatcaatgttccaaaagaccgtgagaactatcaacagatcaacaagaactctacatctaagattcagagagcctcaactattggatttggtatcatacttatattggctttcttttttttttaatatatgagatatttgttttaggctaacatcagcattctgattttgtggtgcaggcaatgaaaataacgcttctgtcattaggcatgtgcggctaccatatacagacaaagccgaattgtcgtacggtacacccaacatgcatgaagatgttactaatctcagtacggctgaactaaaaagaaagcgtgctagagagaggtacgcatcattgacaaaagagctaaaggaagatggaaacaagaagagacgtgattccagaaagcggaggaaggatgaatcaatag
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| CDS seq | atgccgcggttatccaaagtgaaatcaatgttccaaaagaccgtgagaactatcaacagatcaacaagaactctacatctaagattcagagagcctcaactattggatttggcaatgaaaataacgcttctgtcattaggcatgtgcggctaccatatacagacaaagccgaattgtcgtacggtacacccaacatgcatgaagatgttactaatctcagtacggctgaactaa |
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| Protein seq | MPRLSKVKSMFQKTVRTINRSTRTLHLRFREPQLLDLAMKITLLSLGMCGYHIQTKPNCRTVHPTCMKMLLISVRLN |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_08g0001520 | OsLaMu_08g0001520.01 | Chr08 | 1336181 | 1336661 | + | NAM | ||
| CDS seq | atgccgcggttatccaaagtgaaatcaatgttccaaaagaccgtgagaactatcaacagatcaacaagaactctacatctaagattcagagagcctcaactattggatttggcaatgaaaataacgcttctgtcattaggcatgtgcggctaccatatacagacaaagccgaattgtcgtacggtacacccaacatgcatgaagatgttactaatctcagtacggctgaactaa
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| Protein seq | MPRLSKVKSMFQKTVRTINRSTRTLHLRFREPQLLDLAMKITLLSLGMCGYHIQTKPNCRTVHPTCMKMLLISVRLN |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0395500 | SBH | 0.000000 | 0.406230 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g30490 | SBH | 0.000000 | 0.273224 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0395500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0004990 | SBH | 0.0 | 0.0 | 1.608415 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0014840 | SBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0004980 | SBH | 0.0 | 0.0 | 2.527091 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0015070 | SBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0004780 | SBH | 0.0 | 0.0 | 2.059397 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0014870 | SBH | 0.0 | 0.0 | 0.324540 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0014440 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0014500 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0014410 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0045240 | SBH | 0.0 | 0.0 | 0.236739 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0004890 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G004940 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0014730 | SBH | 0.000000 | 3.461511 | 0.0 |
