Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_07g0027600 | OGI:07078810 | 15/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr07:29338283-29341977 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ccaacaatcaaaattcccagagaaaaaaatcctacacttgtcaagaatcaagaattcaagactcataagttccaatcagaatatgctcagctttctgaggctgcatctaatgtcgaccatgtttagcatgaactcaatcacaaattagctaagaatcaaatgatctgcaactcgcagcttggtgaggcatatgaacacaggagcacataactaaaccgatggtggattggagtcctttatcttttcatcagaggaagctcggctctctgaagcagaatggcgcagtccctcgatcatcctgatcacatcctccatcgatgggcgtcgatctggagaccttgatgtgcaagccattgctatctggagcatctgaacaagctcctcctcgatgttttgctgcttgatcagctcgacgtcgaacacctcggctgtccactcctctctgaccaccgagtgcacccatcttggtaggtcgacgacatcgtcattgccctgcgactggagtggagctttaccggtaagcatctccatgaggaggacgccgaagctgtagacgtcggatttctgggtgatcttgcggttctcgatggtctcaggagcgcgataaccgaccacaacgcgagatgcattggctggaacactcatcagggcacttagaccatagtctgaaacataagaactgtaatcttgatcgaggaggatatttgtagacttaatattgccatgggtgagcttggcgccaccttctgcatgaacgtgtgcaatgccgtatgctgttccaaggattatcttcactctggtgctccagtctaatggtgtcttttcagtaacacccctgatacctgccgaatgttcatcagcaaatcagtacaaaatactaccaactgaaagttaactattcacatttatttaacacaagtttcatttctgagtatgagcaTttttttagtgtgcaggagggctgtacaactttctattgatacaagaaaatatgattagactccctacttaagctagctacagaaggaatatggatgcagctttaggcaagttcagctgtagtgaaaaattaaaatcactaatatcctgtgttagtttaaactttattaacatcgcatggatatatcagtttacaaattttaaacttaatcagtgtaggcgttcaccttttaactaatgtgggactcttcttatgtttactcattagccaccgcagctatgagtctatacatgtaccagtgtcttgcaaaaaggatgaaaggaagaaaagcataccatgtaacttggttgagaaactgccattggtgagataatcgtagacgatgagcttctcgtccttagaatagtagtaagcacgaagtgggactaagtttgcatgtttacctaacctaccaattagttccatctgttgctcaaactctttttttcctgccacgacatcttttagtctcttgacaacaacaacggtaccatcctcaagtatagctttgtaagcagttccataacttcccttgccaaggacttctgcagaagctctcagtagatcctccaaatcgaaggtataggagcaaccctccaagaaaaccaacttgtttttctcggcgatctgaacgccactactgaactcctgttttggcttctcacttctgacaccagtgcccttacccttgtagtccacaccactctctttcttgcctttcctctttgaattacacacaaccaacacaaccacaacaaacatcagtactgcgaagcccccaacagcaactgcaattatgaatccggcgccaaactttttctcatgatgcgctgacattggagttggtgctgatgaaggggatgctggtgaaggcgtcggtgaatcaggaagcaagcatttagctagaggtggcccacataatccaggattccccaagaatgagccatttggaaatgtttgaagcgactgaggaatttggcctttcaaatcattgttgctcagattcaatagtctcagacttggaagcttgagatcagggatggatccagagagagaattttcttgtaaattcaggactgataactgagaaaggttttgtaagcttataggaatttcaccggtaaaggaattgtaggagaggtccactacgctgaggttaggattcaaaaaggaaggcaaatctcctgaaaagttattgtgctgaaggtatatggatcgtaaggaaggaagcgtagtcacatcagatggaaggcttccagctaaacgattagaccgtaagctcagaacttggagagagtcaagctttccaagagtgtttggaggaattgctccaatgagaccagcacctggtacccttaattcaaatatgtgtgactgatctcctgagcattttacgccatgccaagaacacaatgatgtgctttgactccagttgagcctgttgccacgatacactgcagaggcaaagtctagaagggcttgcttttcagaggctaagtctgctacagacaagggattgaacaacaaaagtgacaactgcagtgagagcagaagagacaaaggatttctaatactgagatgatccatttgatgaatctccaaatcagggaactagacgagtagcatcttcgtttgtttatgtcagataagtagccgatcctgttgaaataaaagtagcgagcattcagtaataacagttaaaacaactgcactaagatttcaatcgtagctccaaataagaaccgcatttcatcagaagatagcaaataaaggttaccaatcattccttgtatgcttctaaagtgcccaaaagggaacagagagcttatgtgaatcaagcatgaatgtgtaaaacatggtggagcagcataaacatgcttttctttctagtgcgtgacacattgacagacaaaagatccaggacactttggaaaagaagtaaattgaatcaatatgtaataattacagatttcccattccaaacatgtgtagcttgcatctttcagtggtaagatttacatgaggcccggttttactatctctctagggggaaccagaaaccaggcatttagattagagtactaagcaagccatggttctcaatgactctgtgccaatgtcaagaacatgaacatgaatttgacacatggtaaaaaattccaccctcaaaggatggcgcccattaaagtctgaagacaagaaaacatgccctaaaaaattgtgggcagaaagtaatggggaagaaggaaaaagaataggaaaatgatacggtcagcacacaaaagccaaaagcataaccaaagcagggagaaaagatgagggcaagaacaaagctgaacccatcataagttcataaccccacaaagatgagcatatcacatcatgtatttactgtttgctacttgcttagatgaaatactagtaaactagcctagatgagcctagcatcaggcatagaatgcttacactggcaacgcagtagtactgaccgaaccgaactaatttatcatgcaacagctttctgcattcttaggaccaaaatggagcaactttctgggcgccaaatgcggcatttgagcaacttgattagagaagccactaggcaaatttgaaacgaaaagaggaagcaataaaggcaaaaCcgaagctaatggaagattgaatatgggaaggtggcaacgactgatagatttctagtaggagttatgtgggaaac
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| CDS seq | atggatcatctcagtattagaaatcctttgtctcttctgctctcactgcagttgtcacttttgttgttcaatcccttgtctgtagcagacttagcctctgaaaagcaagcccttctagactttgcctctgcagtgtatcgtggcaacaggctcaactggagtcaaagcacatcattgtgttcttggcatggcgtaaaatgctcaggagatcagtcacacatatttgaattaagggtaccaggtgctggtctcattggagcaattcctccaaacactcttggaaagcttgactctctccaagttctgagcttacggtctaatcgtttagctggaagccttccatctgatgtgactacgcttccttccttacgatccatataccttcagcacaataacttttcaggagatttgccttcctttttgaatcctaacctcagcgtagtggacctctcctacaattcctttaccggtgaaattcctataagcttacaaaacctttctcagttatcagtcctgaatttacaagaaaattctctctctggatccatccctgatctcaagcttccaagtctgagactattgaatctgagcaacaatgatttgaaaggccaaattcctcagtcgcttcaaacatttccaaatggctcattcttggggaatcctggattatgtgggccacctctagctaaatgcttgcttcctgattcaccgacgccttcaccagcatccccttcatcagcaccaactccaatgtcagcgcatcatgagaaaaagtttggcgccggattcataattgcagttgctgttgggggcttcgcagtactgatgtttgttgtggttgtgttggttgtgtgtaattcaaagaggaaaggcaagaaagagagtggtgtggactacaagggtaagggcactggtgtcagaagtgagaagccaaaacaggagttcagtagtggcgttcagatcgccgagaaaaacaagttggttttcttggagggttgctcctataccttcgatttggaggatctactgagagcttctgcagaagtccttggcaagggaagttatggaactgcttacaaagctatacttgaggatggtaccgttgttgttgtcaagagactaaaagatgtcgtggcaggaaaaaaagagtttgagcaacagatggaactaattggtaggttaggtaaacatgcaaacttagtcccacttcgtgcttactactattctaaggacgagaagctcatcgtctacgattatctcaccaatggcagtttctcaaccaagttacatggtatcaggggtgttactgaaaagacaccattagactggagcaccagagtgaagataatccttggaacagcatacggcattgcacacgttcatgcagaaggtggcgccaagctcacccatggcaatattaagtctacaaatatcctcctcgatcaagattacagttcttatgtttcagactatggtctaagtgccctgatgagtgttccagccaatgcatctcgcgttgtggtcggttatcgcgctcctgagaccatcgagaaccgcaagatcacccagaaatccgacgtctacagcttcggcgtcctcctcatggagatgcttaccggtaaagctccactccagtcgcagggcaatgacgatgtcgtcgacctaccaagatgggtgcactcggtggtcagagaggagtggacagccgaggtgttcgacgtcgagctgatcaagcagcaaaacatcgaggaggagcttgttcagatgctccagatagcaatggcttgcacatcaaggtctccagatcgacgcccatcgatggaggatgtgatcaggatgatcgagggactgcgccattctgcttcagagagccgagcttcctctgatgaaaagataaaggactccaatccaccatcggtttag
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| Protein seq | MDHLSIRNPLSLLLSLQLSLLLFNPLSVADLASEKQALLDFASAVYRGNRLNWSQSTSLCSWHGVKCSGDQSHIFELRVPGAGLIGAIPPNTLGKLDSLQVLSLRSNRLAGSLPSDVTTLPSLRSIYLQHNNFSGDLPSFLNPNLSVVDLSYNSFTGEIPISLQNLSQLSVLNLQENSLSGSIPDLKLPSLRLLNLSNNDLKGQIPQSLQTFPNGSFLGNPGLCGPPLAKCLLPDSPTPSPASPSSAPTPMSAHHEKKFGAGFIIAVAVGGFAVLMFVVVVLVVCNSKRKGKKESGVDYKGKGTGVRSEKPKQEFSSGVQIAEKNKLVFLEGCSYTFDLEDLLRASAEVLGKGSYGTAYKAILEDGTVVVVKRLKDVVAGKKEFEQQMELIGRLGKHANLVPLRAYYYSKDEKLIVYDYLTNGSFSTKLHGIRGVTEKTPLDWSTRVKIILGTAYGIAHVHAEGGAKLTHGNIKSTNILLDQDYSSYVSDYGLSALMSVPANASRVVVGYRAPETIENRKITQKSDVYSFGVLLMEMLTGKAPLQSQGNDDVVDLPRWVHSVVREEWTAEVFDVELIKQQNIEEELVQMLQIAMACTSRSPDRRPSMEDVIRMIEGLRHSASESRASSDEKIKDSNPPSV |
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| Function | Probable inactive receptor kinase At5g58300 [UniProtKB/Swiss-Prot:Q9LVM0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_07g0027600 | OsLaMu_07g0027600.01 | Chr07 | 29338283 | 29341977 | - | NAM | ||
| CDS seq | atggatcatctcagtattagaaatcctttgtctcttctgctctcactgcagttgtcacttttgttgttcaatcccttgtctgtagcagacttagcctctgaaaagcaagcccttctagactttgcctctgcagtgtatcgtggcaacaggctcaactggagtcaaagcacatcattgtgttcttggcatggcgtaaaatgctcaggagatcagtcacacatatttgaattaagggtaccaggtgctggtctcattggagcaattcctccaaacactcttggaaagcttgactctctccaagttctgagcttacggtctaatcgtttagctggaagccttccatctgatgtgactacgcttccttccttacgatccatataccttcagcacaataacttttcaggagatttgccttcctttttgaatcctaacctcagcgtagtggacctctcctacaattcctttaccggtgaaattcctataagcttacaaaacctttctcagttatcagtcctgaatttacaagaaaattctctctctggatccatccctgatctcaagcttccaagtctgagactattgaatctgagcaacaatgatttgaaaggccaaattcctcagtcgcttcaaacatttccaaatggctcattcttggggaatcctggattatgtgggccacctctagctaaatgcttgcttcctgattcaccgacgccttcaccagcatccccttcatcagcaccaactccaatgtcagcgcatcatgagaaaaagtttggcgccggattcataattgcagttgctgttgggggcttcgcagtactgatgtttgttgtggttgtgttggttgtgtgtaattcaaagaggaaaggcaagaaagagagtggtgtggactacaagggtaagggcactggtgtcagaagtgagaagccaaaacaggagttcagtagtggcgttcagatcgccgagaaaaacaagttggttttcttggagggttgctcctataccttcgatttggaggatctactgagagcttctgcagaagtccttggcaagggaagttatggaactgcttacaaagctatacttgaggatggtaccgttgttgttgtcaagagactaaaagatgtcgtggcaggaaaaaaagagtttgagcaacagatggaactaattggtaggttaggtaaacatgcaaacttagtcccacttcgtgcttactactattctaaggacgagaagctcatcgtctacgattatctcaccaatggcagtttctcaaccaagttacatggtatcaggggtgttactgaaaagacaccattagactggagcaccagagtgaagataatccttggaacagcatacggcattgcacacgttcatgcagaaggtggcgccaagctcacccatggcaatattaagtctacaaatatcctcctcgatcaagattacagttcttatgtttcagactatggtctaagtgccctgatgagtgttccagccaatgcatctcgcgttgtggtcggttatcgcgctcctgagaccatcgagaaccgcaagatcacccagaaatccgacgtctacagcttcggcgtcctcctcatggagatgcttaccggtaaagctccactccagtcgcagggcaatgacgatgtcgtcgacctaccaagatgggtgcactcggtggtcagagaggagtggacagccgaggtgttcgacgtcgagctgatcaagcagcaaaacatcgaggaggagcttgttcagatgctccagatagcaatggcttgcacatcaaggtctccagatcgacgcccatcgatggaggatgtgatcaggatgatcgagggactgcgccattctgcttcagagagccgagcttcctctgatgaaaagataaaggactccaatccaccatcggtttag
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| Protein seq | MDHLSIRNPLSLLLSLQLSLLLFNPLSVADLASEKQALLDFASAVYRGNRLNWSQSTSLCSWHGVKCSGDQSHIFELRVPGAGLIGAIPPNTLGKLDSLQVLSLRSNRLAGSLPSDVTTLPSLRSIYLQHNNFSGDLPSFLNPNLSVVDLSYNSFTGEIPISLQNLSQLSVLNLQENSLSGSIPDLKLPSLRLLNLSNNDLKGQIPQSLQTFPNGSFLGNPGLCGPPLAKCLLPDSPTPSPASPSSAPTPMSAHHEKKFGAGFIIAVAVGGFAVLMFVVVVLVVCNSKRKGKKESGVDYKGKGTGVRSEKPKQEFSSGVQIAEKNKLVFLEGCSYTFDLEDLLRASAEVLGKGSYGTAYKAILEDGTVVVVKRLKDVVAGKKEFEQQMELIGRLGKHANLVPLRAYYYSKDEKLIVYDYLTNGSFSTKLHGIRGVTEKTPLDWSTRVKIILGTAYGIAHVHAEGGAKLTHGNIKSTNILLDQDYSSYVSDYGLSALMSVPANASRVVVGYRAPETIENRKITQKSDVYSFGVLLMEMLTGKAPLQSQGNDDVVDLPRWVHSVVREEWTAEVFDVELIKQQNIEEELVQMLQIAMACTSRSPDRRPSMEDVIRMIEGLRHSASESRASSDEKIKDSNPPSV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.312121 | 4.504449 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0681100 | RBH | 1.374032 | 1.603315 | 3.983841 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48310 | RBH | 0.777084 | 1.337157 | 0.997379 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0681100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0027880 | RBH | 2.122618 | 20.962868 | 11.515915 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0027920 | RBH | 0.208548 | 3.062685 | 2.237956 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0027700 | RBH | 3.718119 | 23.333460 | 23.578905 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0027510 | RBH | 0.253582 | 0.630834 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0027800 | RBH | 2.577798 | 13.897179 | 14.048104 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0311100 | SBH | 2.595524 | 14.7210805 | 0.303493 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028250 | RBH | 0.930994 | 0.949834 | 3.295200 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0483900 | RBH | 6.8019415 | 3.6815625 | 17.8512 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0027530 | RBH | 0.000000 | 0.231527 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0027990 | RBH | 0.832263 | 1.626479 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0027710 | RBH | 2.341721 | 14.307792 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0028030 | RBH | 1.599416 | 0.971822 | 1.985130 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0016240 | RBH | 0.0 | 9.402611 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G027660 | RBH | 1.001062 | 2.725330 | 3.446734 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0027410 | RBH | 0.575397 | 12.279969 | 5.042692 |
