Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_07g0017950 | OGI:07058990 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr07:21909499-21910203 | ||||||||
| Gene Symbol | AGP, OsAGP, RLCK235, OsRLCK235, RLCK237, OsRLCK237, - | ||||||||||
| DNA seq | ttactgaattgtcaCtgcgagaaatgtaatgttggtttgctcaaattgagctaagaagttggtggtgctcacgatgcttaggagatcaccggattgctcgctgtagtaggagccgctgttcctcctccccgtgacgatctccaggaccaggacgccgaagctgaacacgtctgacttgacggagtagtgcccacgcatcgcgtactctggcgccatgtatccactgcagataaattaagaacatggttaactttgacgataTCtgatgcacaatctttgatctgtctgtcatgggtgttgatggatgactggatgtgcttactaTgtcccgacaacgcgatttgtgacgtcctgTGtttggtcgcctccgaagagcctcgccaagccgaagtctgaaatCttggggttgtaatcagagtctagaagaacattgcttgccttAaggtcccgatgaacgatcttcagctgggaatcttcatggagatactgcattcctcgagcgactccgTttattattttcagccttcTtccccagtctagcagactgcTtttctcagcatctgtctcatgaaaatgagaagcatcaggggacatgaATtacttgtgcaaattaatgttgacaaatttttagaatgcatggaggggaaatgcaccaaaaagaatggtatccaagcttctattgggcatgtattcatagacaagcat
More
|
||||||||||
| CDS seq | atgcttgtctatgaatacatgcccaatagaagcttggataccattctttttgatgctgagaaaAgcagtctgctagactggggaAgaaggctgaaaataataaAcggagtcgctcgaggaatgcagtatctccatgaagattcccagctgaagatcgttcatcgggacctTaaggcaagcaatgttcttctagactctgattacaaccccaaGatttcagacttcggcttggcgaggctcttcggaggcgaccaaaCAcaggacgtcacaaatcgcgttgtcgggacAtatggatacatggcgccagagtacgcgatgcgtgggcactactccgtcaagtcagacgtgttcagcttcggcgtcctggtcctggagatcgtcacggggaggaggaacagcggctcctactacagcgagcaatccggtgatctcctaagcatcgtgagcaccaccaacttcttagctcaatttgagcaaaccaacattacatttctcgcaGtgacaattcagtaa
More
|
||||||||||
| Protein seq | MLVYEYMPNRSLDTILFDAEKSSLLDWGRRLKIINGVARGMQYLHEDSQLKIVHRDLKASNVLLDSDYNPKISDFGLARLFGGDQTQDVTNRVVGTYGYMAPEYAMRGHYSVKSDVFSFGVLVLEIVTGRRNSGSYYSEQSGDLLSIVSTTNFLAQFEQTNITFLAVTIQ |
||||||||||
| Function | Cysteine-rich receptor-like protein kinase 6 [UniProtKB/Swiss-Prot:Q0D5R3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_07g0017950 | OsLaMu_07g0017950.01 | Chr07 | 21909499 | 21910203 | - | NAM | ||
| CDS seq | atgcttgtctatgaatacatgcccaatagaagcttggataccattctttttgatgctgagaaaAgcagtctgctagactggggaAgaaggctgaaaataataaAcggagtcgctcgaggaatgcagtatctccatgaagattcccagctgaagatcgttcatcgggacctTaaggcaagcaatgttcttctagactctgattacaaccccaaGatttcagacttcggcttggcgaggctcttcggaggcgaccaaaCAcaggacgtcacaaatcgcgttgtcgggacAtatggatacatggcgccagagtacgcgatgcgtgggcactactccgtcaagtcagacgtgttcagcttcggcgtcctggtcctggagatcgtcacggggaggaggaacagcggctcctactacagcgagcaatccggtgatctcctaagcatcgtgagcaccaccaacttcttagctcaatttgagcaaaccaacattacatttctcgcaGtgacaattcagtaa
More
|
|||||||
| Protein seq | MLVYEYMPNRSLDTILFDAEKSSLLDWGRRLKIINGVARGMQYLHEDSQLKIVHRDLKASNVLLDSDYNPKISDFGLARLFGGDQTQDVTNRVVGTYGYMAPEYAMRGHYSVKSDVFSFGVLVLEIVTGRRNSGSYYSEQSGDLLSIVSTTNFLAQFEQTNITFLAVTIQ |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 2.703057 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0540100 | SBH | 1.327324 | 1.509061 | 4.121221 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35580 | SBH | 0.903028 | 1.044511 | 1.059144 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0540100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0018180 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0018240 | SBH | 0.000000 | 2.355741 | 0.237809 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0017860 | RBH | 0.103705 | 1.116436 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0017990 | RBH | 0.061716 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0017760 | SBH | 0.412422 | 3.766631 | 2.356876 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0349900 | RBH | 0.235188 | 0.4765125 | 0.032501 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018260 | RBH | 0.217382 | 0.298519 | 0.167195 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0358400 | RBH | 1.1841445 | 13.820534 | 1.580925 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017940 | RBH | 0.026354 | 0.135489 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0017680 | RBH | 0.099510 | 2.096761 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017620 | RBH | 0.283242 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0024200 | SBH | 22.754297 | 0.000000 | 7.114478 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0018930 | SBH | 0.0 | 0.150885 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017910 | RBH | 0.000000 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0017630 | RBH | 0.466285 | 10.423672 | 0.741305 |
