Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_07g0017750 | OGI:07058690 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr07:21736218-21737255 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgactctcgccgcgatcctcctcctcgtcctcgccctggtcgcgccgccgcttgccgccgccgccgtcctcgacgacggcggcggcggccaccgcccgccgttccacatgtgcgggatggtgcaggggcggttcgctcccaacagctcgtacgaggccaacctgcggcgtgtcgccgccacgctgccagccatggtggcgaacggatcctcctcctcctcctccggcgtcgatgtcctcgtcggcgagcggcccgaccagatctccgcgtcggccttctgcggcgccaactcgtcggcggcgccggagtactccgactgcggcgcctgcgtcgccaaggcgctccggtacgcgcggcggctgtgcgggtatagcaggcgcgccatggtcgacctcggcgcctgccgcgtcagctaccacgacgtcggacgcgtggagctggagatacaagcttcattagccgttcgcatcttggacgagcgtgagtgatctgctactgctagctcgatagatttaattatactgtgattttgttcgccttaattcagtactgattccagaatttcagatagactctgcttcatccgaatcaacattttagtcgttttcttttccagatacttcatcttggtggagaattgttttgacccatgatttccctatgatggtggtgttccaagtgatcggagtcgcctgggttctgttcatgttcctccaggaatggcgagacggtagaaggagaagagcccaggccaatcggctgccataggtgggaggttcagttcaggtatgtttcatctggttttgtttattcccaacaagaattcgaaaagttcgttataatatcatagaatgtttcaacttggttgaaatgcaaatataatgtagacaagttaaccagagttctttgagatcttggtcggattcttgactgatatccatattccatttgatacagggtttcaacttctgtttgtaattcgaccgatcggctgaccctgaacaagcaaatccacttgcggcaaaagaaaagggccc
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| CDS seq | atgactctcgccgcgatcctcctcctcgtcctcgccctggtcgcgccgccgcttgccgccgccgccgtcctcgacgacggcggcggcggccaccgcccgccgttccacatgtgcgggatggtgcaggggcggttcgctcccaacagctcgtacgaggccaacctgcggcgtgtcgccgccacgctgccagccatggtggcgaacggatcctcctcctcctcctccggcgtcgatgtcctcgtcggcgagcggcccgaccagatctccgcgtcggccttctgcggcgccaactcgtcggcggcgccggagtactccgactgcggcgcctgcgtcgccaaggcgctccggtacgcgcggcggctgtgcgggtatagcaggcgcgccatggtcgacctcggcgcctgccgcgtcagctaccacgacgtcggacgcgtggagctggagatacaagcttcattagccgttcgcatcttggacgagcatacttcatcttggtggagaattgttttgacccatgatttccctatgatggtggtgttccaagtgatcggagtcgcctgggttctgttcatgttcctccaggaatggcgagacggtagaaggagaagagcccaggccaatcggctgccatag
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| Protein seq | MTLAAILLLVLALVAPPLAAAAVLDDGGGGHRPPFHMCGMVQGRFAPNSSYEANLRRVAATLPAMVANGSSSSSSGVDVLVGERPDQISASAFCGANSSAAPEYSDCGACVAKALRYARRLCGYSRRAMVDLGACRVSYHDVGRVELEIQASLAVRILDEHTSSWWRIVLTHDFPMMVVFQVIGVAWVLFMFLQEWRDGRRRRAQANRLP |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_07g0017750 | OsLaMu_07g0017750.01 | Chr07 | 21736218 | 21737255 | + | NAM | ||
| CDS seq | atgactctcgccgcgatcctcctcctcgtcctcgccctggtcgcgccgccgcttgccgccgccgccgtcctcgacgacggcggcggcggccaccgcccgccgttccacatgtgcgggatggtgcaggggcggttcgctcccaacagctcgtacgaggccaacctgcggcgtgtcgccgccacgctgccagccatggtggcgaacggatcctcctcctcctcctccggcgtcgatgtcctcgtcggcgagcggcccgaccagatctccgcgtcggccttctgcggcgccaactcgtcggcggcgccggagtactccgactgcggcgcctgcgtcgccaaggcgctccggtacgcgcggcggctgtgcgggtatagcaggcgcgccatggtcgacctcggcgcctgccgcgtcagctaccacgacgtcggacgcgtggagctggagatacaagcttcattagccgttcgcatcttggacgagcatacttcatcttggtggagaattgttttgacccatgatttccctatgatggtggtgttccaagtgatcggagtcgcctgggttctgttcatgttcctccaggaatggcgagacggtagaaggagaagagcccaggccaatcggctgccatag
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| Protein seq | MTLAAILLLVLALVAPPLAAAAVLDDGGGGHRPPFHMCGMVQGRFAPNSSYEANLRRVAATLPAMVANGSSSSSSGVDVLVGERPDQISASAFCGANSSAAPEYSDCGACVAKALRYARRLCGYSRRAMVDLGACRVSYHDVGRVELEIQASLAVRILDEHTSSWWRIVLTHDFPMMVVFQVIGVAWVLFMFLQEWRDGRRRRAQANRLP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 5.690841 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0536300 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35160 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0536300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0017950 | RBH | 0.000000 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0017840 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0017800 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0017720 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0017850 | RBH | 1.615438 | 0.0 | 1.697031 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0343700 | SBH | 2.624869 | 0.8065805 | 0.030676 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018340 | RBH | 0.0 | 0.315499 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0358200 | RBH | 0.480437 | 12.1421425 | 0.4249585 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017590 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0017750 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017690 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0017970 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0017770 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017740 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0017610 | RBH | 0.0 | 0.0 | 0.0 |
