Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_07g0010060 | OGI:07029920 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr07:10693867-10697404 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ataaaacaacactgattctacatgttcagatatgttccattacaacttcagacttgcacattctatataaccaagaccttaatgctacaaatgcctaacctaatattcaatcttccacagtacaatcactcatttgataagaaattgttgcttaaagcttacccaaaaaagatactcatatagctgaggccctgtagatagctaagcatacaagtagtggaacaccgaagcagtagataggtgcatccatgaatggattagcctcgtatgccctaacgatagccctacaatgctgcagaaaagtgcatgttagtgtggaagaaaaaattcttgtggttttaagtatgacctgcagatttttcattgtaacagattaaataaccaagaggcatatcctcttaaagacttctttttttattttcactagggacattaaatttttgagagcaactcccaaattaggaagcacttcatgaatctaatgaaatgatcgattgaccatagctgtaattgaatacttccatgtggagaagaattattgtggaaaatgtgcttccagtgttgggtccaagttgaaaggaaaacataccttccaatgtctccatgcaattggcagacaaagaagtataagaaactttctaaagcaacggaatatccaaacatgctgtatgcattttctttcctcatagtgatcatcatccttctttgccttgtgggagatgtggaccaaatatgctgccctatttgctgctatggctgctataatgagaaacgccggcaaaaccacaaatagaagatgaggaagaacaataaccatcacatcaggcagaccaatatatggcgctgctgtactcacattggctagattactagtgctccaacctttgtaataaagatacattttattgtgattttctgtaacagcgttgccagcaaaccatgggaagaagaccagatataacaaatatatcaacatcccagaccatacagaatgcatctttgacagctcagcagcaaaatattcaaaactgatcagcagatggcgtcctgaactacctgcagccgtcttcgaactacggcatttcaacatgtggttctcatataacatgagcaatgtgcgaggaataagaatcagcaaacaaagaaatgcaagcgtagaccacataattggttgatacagctgaccccactgacaacccattacacggaactccttccaagtccacctaacttttgcagttaaaccattcacagaaaatggcctcagttggctataatatatcttcccggtcatatcctttgcttctatctggagccagtaccgatctggcgattcatctacatatgctttccagttccatgggactgtatacatagcacctcttgctccctcaccactagtcatttccatgtctttttccaatactagatgatggctaccagaaaatgaatcgtatatttttactgatacagatataatcttatattttgagaagactagtgttcttaccatcccaaaatgactggtgctatttgcttggcagttcaaatcatgaggtgtagaaagtctttgcataaatcgagaatccaatggaaaggtgggtactatgatcacatccatagagccaaatctgaaatctatgtcagtatatgagacatggccagaatcaattgctaggatcctcatgctccgggcacttctccaatcacccatttcccactcccagaattctgcaacagattctgttgtcgtgggacagttgttactgcctatggatgttgatgtgccttcatggatattagtttggtaatattgttttgcagaaagatgatttctgtcagatctatgatgacgcttcaagtttcttccaaagttagtatgaagatgcccacataagtaagctgacaatgaatgctttagaaatacatctctgaggcttccacctgaagttgttgatgatgaaaaggacataggaaaatgtccaaaggtaacctttgttactgcagaagttgaagagtaattatcccactgtgaaagtgctgcatctaattcaacaagtaactgatctgttggttgcccgaatacatttgcagggcttcgtagaccaatacttgctgcactgtcgaatccaacaaatagatgcttccaaccactattctgcatgttttaaataatgagtaagataataccaacttaacaacttcaaacaaacctatattgaaattatacgaagccatgctagagactgaactggcaataattaagttatatggcaaggttgactgcataacatgatttactagaacaaacctgtaatgttatgctttggacattacctgtccgtcctaatcttgcattaatactgtgcttttcgtacaaatcaaacatcccaccaacctcaggaacaccatatgaatcatgattacctcttaaatcataaaatatttccttgttcagcccacttaagccaacaacttcgtcaatcaactcttcatactccaaccattcagacttctcttgtcttgatgataacaaatctttactttttgcatctgagcacaacatggtaaacagacaattttttaaaatcaatgcctaaaataaaccaaatccatcttctgtaaatttgtcattttgagtgatgtggggcttatgaaaattggagtacagatgtgggacttatgaccaaatttctattccatcaaaattatctaccagagaataattatgccaattaagagtgcccacaaatgcaccaggttttcctcttgctggcttctcaattcacaaaacttcactcttcttagtcagattttagtaccactttcaaaattatggaatatatctaaatgggttcttggcctagcacaaacaaacttgaccaataatatacaaaacaggaaaaaagatgtgataccaaacatacaattatcacaaaatctaggccacccacaatggacctaaacttcctctgtcaaaaattcaaaattcagaccggggcctgaatgcctgaatctccctagttcatagttcataccaattctgcaagcacatcaagagatgagcaaggcagcagcggaagcataccggtgagatccccggtgatgaggacgagggaggggttgaccatggcgagtgcaccgcccacatggcggcggaagtcggccgcgcgttccgggtggaaggcgctgaggtggaggtcggacagctgcaccgcccacaccaccgacctcggctcgccctcgacctccaccacacgacgcaggtcgccacggatgggggcggcgccggcgagcacgccgagcagcgccacagggaggaagaagagggcgaggggatacgcgcggaggcgaggtggcgcccgcgcggccatcgtcggagtccggcgagccctcgccagttgggggagcttgcaggccggaggacggacggccactggtggatttgttaggctgctgccatttttttcacatttttttggtgttggcttggctccactagacaattttcaggccatcgacgactaaccacggcagt
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| CDS seq | atggccgcgcgggcgccacctcgcctccgcgcgtatcccctcgccctcttcttcctccctgtggcgctgctcggcgtgctcgccggcgccgcccccatccgtggcgacctgcgtcgtgtggtggaggtcgagggcgagccgaggtcggtggtgtgggcggtgcagctgtccgacctccacctcagcgccttccacccggaacgcgcggccgacttccgccgccatgtgggcggtgcactcgccatggtcaacccctccctcgtcctcatcaccggggatctcaccgatgcaaaaagtaaagatttgttatcatcaagacaagagaagtctgaatggttggagtatgaagagttgattgacgaagttgttggcttaagtgggctgaacaaggaaatattttatgatttaagaggtaatcatgattcatatggtgttcctgaggttggtgggatgtttgatttgtacgaaaagcacagtattaatgcaagattaggacggacaggtaatgtccaaagcataacattacagaatagtggttggaagcatctatttgttggattcgacagtgcagcaagtattggtctacgaagccctgcaaatgtattcgggcaaccaacagatcagttacttgttgaattagatgcagcactttcacagtgggataattactcttcaacttctgcagtaacaaaggttacctttggacattttcctatgtccttttcatcatcaacaacttcaggtggaagcctcagagatgtatttctaaagcattcattgtcagcttacttatgtgggcatcttcatactaactttggaagaaacttgaagcgtcatcatagatctgacagaaatcatctttctgcaaaacaatattaccaaactaatatccatgaaggcacatcaacatccataggcagtaacaactgtcccacgacaacagaatctgttgcagaattctgggagtgggaaatgggtgattggagaagtgcccggagcatgaggatcctagcaattgattctggccatgtctcatatactgacatagatttcagatttggctctatggatgtgatcatagtacccacctttccattggattctcgatttatgcaaagactttctacacctcatgatttgaactgccaagcaaatagcaccagtcattttgggatggtaagaacactagtcttctcaaaatataagattatatctgtatcagtaaaaatatacgattcattttctggtagccatcatctagtattggaaaaagacatggaaatgactagtggtgagggagcaagaggtgctatgtatacagtcccatggaactggaaagcatatgtagatgaatcgccagatcggtactggctccagatagaagcaaaggatatgaccgggaagatatattatagccaactgaggccattttctgtgaatggtttaactgcaaaagttaggtggacttggaaggagttccgtgtaatgggttgtcagtggggtcagctgtatcaaccaattatgtggtctacgcttgcatttctttgtttgctgattcttattcctcgcacattgctcatgttatatgagaaccacatgttgaaatgccgtagttcgaagacggctgcaggtagttcaggacgccatctgctgatcagttttgaatattttgctgctgagctgtcaaagatgcattctgtatggtctgggatgttgatatatttgttatatctggtcttcttcccatggtttgctggcaacgctgttacagaaaatcacaataaaatgtatctttattacaaaggttggagcactagtaatctagccaatgtgagtacagcagcgccatatattggtctgcctgatgtgatggttattgttcttcctcatcttctatttgtggttttgccggcgtttctcattatagcagccatagcagcaaatagggcagcatatttggtccacatctcccacaaggcaaagaaggatgatgatcactatgaggaaagaaaatgcatacagcatgtttggatattccgttgctttagaaagtttcttatacttctttgtctgccaattgcatggagacattggaagcattgtagggctatcgttagggcatacgaggctaatccattcatggatgcacctatctactgcttcggtgttccactacttgtatgcttagctatctacagggcctcagctatatga
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| Protein seq | MAARAPPRLRAYPLALFFLPVALLGVLAGAAPIRGDLRRVVEVEGEPRSVVWAVQLSDLHLSAFHPERAADFRRHVGGALAMVNPSLVLITGDLTDAKSKDLLSSRQEKSEWLEYEELIDEVVGLSGLNKEIFYDLRGNHDSYGVPEVGGMFDLYEKHSINARLGRTGNVQSITLQNSGWKHLFVGFDSAASIGLRSPANVFGQPTDQLLVELDAALSQWDNYSSTSAVTKVTFGHFPMSFSSSTTSGGSLRDVFLKHSLSAYLCGHLHTNFGRNLKRHHRSDRNHLSAKQYYQTNIHEGTSTSIGSNNCPTTTESVAEFWEWEMGDWRSARSMRILAIDSGHVSYTDIDFRFGSMDVIIVPTFPLDSRFMQRLSTPHDLNCQANSTSHFGMVRTLVFSKYKIISVSVKIYDSFSGSHHLVLEKDMEMTSGEGARGAMYTVPWNWKAYVDESPDRYWLQIEAKDMTGKIYYSQLRPFSVNGLTAKVRWTWKEFRVMGCQWGQLYQPIMWSTLAFLCLLILIPRTLLMLYENHMLKCRSSKTAAGSSGRHLLISFEYFAAELSKMHSVWSGMLIYLLYLVFFPWFAGNAVTENHNKMYLYYKGWSTSNLANVSTAAPYIGLPDVMVIVLPHLLFVVLPAFLIIAAIAANRAAYLVHISHKAKKDDDHYEERKCIQHVWIFRCFRKFLILLCLPIAWRHWKHCRAIVRAYEANPFMDAPIYCFGVPLLVCLAIYRASAI |
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| Function | Putative metallophosphoesterase At3g03305 [UniProtKB/Swiss-Prot:Q0WVZ1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_07g0010060 | OsLaMu_07g0010060.01 | Chr07 | 10693867 | 10697404 | - | NAM | ||
| CDS seq | atggccgcgcgggcgccacctcgcctccgcgcgtatcccctcgccctcttcttcctccctgtggcgctgctcggcgtgctcgccggcgccgcccccatccgtggcgacctgcgtcgtgtggtggaggtcgagggcgagccgaggtcggtggtgtgggcggtgcagctgtccgacctccacctcagcgccttccacccggaacgcgcggccgacttccgccgccatgtgggcggtgcactcgccatggtcaacccctccctcgtcctcatcaccggggatctcaccgatgcaaaaagtaaagatttgttatcatcaagacaagagaagtctgaatggttggagtatgaagagttgattgacgaagttgttggcttaagtgggctgaacaaggaaatattttatgatttaagaggtaatcatgattcatatggtgttcctgaggttggtgggatgtttgatttgtacgaaaagcacagtattaatgcaagattaggacggacaggtaatgtccaaagcataacattacagaatagtggttggaagcatctatttgttggattcgacagtgcagcaagtattggtctacgaagccctgcaaatgtattcgggcaaccaacagatcagttacttgttgaattagatgcagcactttcacagtgggataattactcttcaacttctgcagtaacaaaggttacctttggacattttcctatgtccttttcatcatcaacaacttcaggtggaagcctcagagatgtatttctaaagcattcattgtcagcttacttatgtgggcatcttcatactaactttggaagaaacttgaagcgtcatcatagatctgacagaaatcatctttctgcaaaacaatattaccaaactaatatccatgaaggcacatcaacatccataggcagtaacaactgtcccacgacaacagaatctgttgcagaattctgggagtgggaaatgggtgattggagaagtgcccggagcatgaggatcctagcaattgattctggccatgtctcatatactgacatagatttcagatttggctctatggatgtgatcatagtacccacctttccattggattctcgatttatgcaaagactttctacacctcatgatttgaactgccaagcaaatagcaccagtcattttgggatggtaagaacactagtcttctcaaaatataagattatatctgtatcagtaaaaatatacgattcattttctggtagccatcatctagtattggaaaaagacatggaaatgactagtggtgagggagcaagaggtgctatgtatacagtcccatggaactggaaagcatatgtagatgaatcgccagatcggtactggctccagatagaagcaaaggatatgaccgggaagatatattatagccaactgaggccattttctgtgaatggtttaactgcaaaagttaggtggacttggaaggagttccgtgtaatgggttgtcagtggggtcagctgtatcaaccaattatgtggtctacgcttgcatttctttgtttgctgattcttattcctcgcacattgctcatgttatatgagaaccacatgttgaaatgccgtagttcgaagacggctgcaggtagttcaggacgccatctgctgatcagttttgaatattttgctgctgagctgtcaaagatgcattctgtatggtctgggatgttgatatatttgttatatctggtcttcttcccatggtttgctggcaacgctgttacagaaaatcacaataaaatgtatctttattacaaaggttggagcactagtaatctagccaatgtgagtacagcagcgccatatattggtctgcctgatgtgatggttattgttcttcctcatcttctatttgtggttttgccggcgtttctcattatagcagccatagcagcaaatagggcagcatatttggtccacatctcccacaaggcaaagaaggatgatgatcactatgaggaaagaaaatgcatacagcatgtttggatattccgttgctttagaaagtttcttatacttctttgtctgccaattgcatggagacattggaagcattgtagggctatcgttagggcatacgaggctaatccattcatggatgcacctatctactgcttcggtgttccactacttgtatgcttagctatctacagggcctcagctatatga
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| Protein seq | MAARAPPRLRAYPLALFFLPVALLGVLAGAAPIRGDLRRVVEVEGEPRSVVWAVQLSDLHLSAFHPERAADFRRHVGGALAMVNPSLVLITGDLTDAKSKDLLSSRQEKSEWLEYEELIDEVVGLSGLNKEIFYDLRGNHDSYGVPEVGGMFDLYEKHSINARLGRTGNVQSITLQNSGWKHLFVGFDSAASIGLRSPANVFGQPTDQLLVELDAALSQWDNYSSTSAVTKVTFGHFPMSFSSSTTSGGSLRDVFLKHSLSAYLCGHLHTNFGRNLKRHHRSDRNHLSAKQYYQTNIHEGTSTSIGSNNCPTTTESVAEFWEWEMGDWRSARSMRILAIDSGHVSYTDIDFRFGSMDVIIVPTFPLDSRFMQRLSTPHDLNCQANSTSHFGMVRTLVFSKYKIISVSVKIYDSFSGSHHLVLEKDMEMTSGEGARGAMYTVPWNWKAYVDESPDRYWLQIEAKDMTGKIYYSQLRPFSVNGLTAKVRWTWKEFRVMGCQWGQLYQPIMWSTLAFLCLLILIPRTLLMLYENHMLKCRSSKTAAGSSGRHLLISFEYFAAELSKMHSVWSGMLIYLLYLVFFPWFAGNAVTENHNKMYLYYKGWSTSNLANVSTAAPYIGLPDVMVIVLPHLLFVVLPAFLIIAAIAANRAAYLVHISHKAKKDDDHYEERKCIQHVWIFRCFRKFLILLCLPIAWRHWKHCRAIVRAYEANPFMDAPIYCFGVPLLVCLAIYRASAI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.230924 | 4.260937 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0274100 | RBH | 0.816572 | 0.097110 | 3.129580 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g17280 | RBH | 0.711341 | 0.065806 | 0.729164 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0274100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0010120 | RBH | 0.396677 | 6.129733 | 3.496856 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0010240 | RBH | 0.301604 | 1.262392 | 1.071301 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0010060 | RBH | 0.480783 | 3.551075 | 4.495475 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0009840 | RBH | 0.100221 | 0.160222 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0010200 | RBH | 1.954931 | 11.698644 | 5.515029 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0183700 | RBH | 2.843819 | 9.0761685 | 6.634653 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0010650 | RBH | 0.131707 | 0.404826 | 0.522043 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0180400 | RBH | 3.4567095 | 8.8471105 | 13.1629195 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0010130 | RBH | 0.155232 | 0.115498 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0010190 | RBH | 0.176676 | 4.681969 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0010130 | RBH | 0.923813 | 2.443384 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0010160 | RBH | 0.216684 | 0.824747 | 0.676556 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G010030 | RBH | 0.549463 | 1.842662 | 2.055248 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0009830 | RBH | 0.308642 | 18.916538 | 3.193763 |
