Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_07g0002090 | OGI:07005300 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr07:1694165-1697789 | ||||||||
| Gene Symbol | RLCK222, OsRLCK222 | ||||||||||
| DNA seq | ccacagttaaaaggttatgctgtcacattggatggagatagcatttgacattttggggctcagattgaaagaaaaaaaaaagaagctaaaatggattcagataactaagctcttaacttcctacaaagtttcttgattgtagcaggaaactggaggttaagaagcttatatttacaacacaaatacctaagataccaaagatacatgccacacaagaaattcagtggcctacaatttccacaccctaaatgcgaaggcctaCaTACCACACACCCtaCCACACACCCTAAGCATTCCAGATTAGAAACCCAAACTTCACCAAATCAAACTGAACTGTAACAATTTAGTTCAGCATTTCTTCATATGCTGATGAGATCAGGTGGCGGTGAAGATGGTGAGTTTAGCTGCTGCTGCTGCTGCTCTTTGGCTTCATTGGCCTCTGCAGATTCAGCTGGCACTACAAGATCAGACACAGCACCTTCACCACTAGGAGGCTCCTCTCCTTGCTTCGATGTCGGCTTGGGAAGCTCACTGAGGATCTGCACCACCTCCCTCATTGTCGGTCGCTGCACGCTCTGCTCCTCGACGCAAAGCAATGCGACGTAGAAGACGTGCATGACCTCGTGGACCGGCACAGTTGAGAGCCTAGGGTCCAAGATCTTGATCACATGTTCCTTGTTCGAGTCCGTCATCGTCTTGACCCACTGAACGATGTCGACGCCATCCCCAAACTCCccctaccggcttctttccggtgatcagctcaaggagcacaacaccgaagctgtagacatcgctcttctcatcgaccttgagcgtatatgcatactctgtaaatccacaatcacaacacagtgcatgattagccaacttgaagacatcaattctcttctagaatagcaagacaattcttaacaagttaaaacaagactacaacagaaacacaatagtggtatatcaaaatcaagcgaatttaaaccatatacgaaggcagcacaaatgaaccaaagatcaatcttttacctggagcaatataaccataagagccagcaattgcagacatgcactctgatgtgccagagtcctgcaagaacttggcaagcccgaagtcagcaacatgcgcttcgaaatcggagtcaaggagaatgttgttcgacttgacatcgcggtgcaatatcggcggtgagcaatcatggtgcaggtagcagagccccttggcagcctcaacagcaaccttgtaccttgtgtcccaatgcaggtggccacccttcttgccatggagtagctccccaaggctgccattgggcatatactcgtaaacgagtaggttcgtctcattgttcgagcagaagccgagcaacctcacaatgtagcggtgccggatcctcccgagcgtctgaatctccgcggagaacccgtgatcatgggaggaaccacggctcatggcgggaagccgcttcaccgcgacatgttcaccatccggcattgtccccttgtacacagtcccagctccaccTttgccaatgatgttctcctccttgagactatcaagcacatcgtcgcaggtgaattcgaggcgctggaatgcggtgagcttccaagcacgcgcctcactcgccttcttcagtgaccgggccttcaagatcgccatggcagcaaatgcaattgaaagggcaagcaatcctagcacaatcagcagcttgaagctattggagagtccaccatggctgcggccgccatggtcagtgccgggagcaccgggatggcatggcccgaggtacggcccgcacaatcccgggttgccgacgaaggatgtggcattgaagtagctgaattgccctgtggccggcacgagcccggacaggttgttgtacgagaaatccacggcggtgaggctttgcattgcggcaatggtggccggaatctcgccgtcgagctggttccttgacaggttcagatagttcagtatccgcatcccagagatggccggcggtatctcaccggagaggttgttcctactgaggtcaaggtaggtgagcagccggcatttcccaatctccggcggcacgccgccgtcgaacgaattgccactgaggtcagccttggacagctgctgcagccggccaatctccggcgggatttcgccggtgaacgcgttctgatcaaggagcaatttctgaacaccggagaagctcccgatgaacgccggcaatgctccggtgagctggttgttggagaggctaatctggccaagattcggcgcgccggtgccggacaccgccgggaagccgccggagatgagattatcctggagctccacctgagtcaggttcgggagctcgaagagaccctcggggatggagccattgaggtagttgtcgccgaggcggacgcgggtgagcgacgtgcacttgccgagggaggcggggatggcgccgaagagcgagttgccgagcgcgatgagcgtctccagcttgccgccggcgcagaggtccggcggcagcgtgccggtgaggcggttcgacgagaggtcgagcagctggaacctcccgttgcggcccagccggcgagggatcccgccGgtgaagttgttctcccatagctgcagcacctcgaggctgggcaggtcgccgacgaactccgggatgtcgcctcgcagcttgttccggaacaggttgagcagggtgaggttcttgaggtcggcgaacgtcgccgggatctcgccggcgagcgcgttgttggacaggtcgagcgagctgaggctcgcgagcttgccgagctcgcgcgggatgccgccggcgaggccgttcacctgcaggaacagcgtgtccaggttcgcgaggttgcccaactccggtgggatctcgccggagaggccgcagttggcggcgtcgaggcggacgaggtcggtcatgttgccgagctcgggtggtatcccaccggagtagctgttgaagtagccgatgtagagctccctgaggctcgtcaggttgcctagctccggtggtatcttcccggagagctcgttgccggagacggcgaggtactggagcCTcccccaccggccgtactcgggcgggatcccgccggagaaaaagttgccgccgaggtggaggtggcggagctgcgccatggacaccacctcgagcgggagcgcgccggtgaggttgttgttgtagaggtcgagcacccggagcgcgcggagccgcgacagctgcggcgggaaggtgccattgaagccgttgttggagaggttgaggtgggtgaggaacggcgcgaggcgggacagcgccgccggaatgggccccgacagcgcgttcgcggcgaggtcgaggcgcgccaggtgctgcagccccgacagcgcggcgccgggcaagccgccggtgaggttgcgcccggacacgtcgagccccaccaccgcaccccgcgcgttgcacgccacgcccgaccacgcgcacgggctcgaggtggtgttcgtcgtccacgacgcgagcgcgcccgtcgggtcgtcgagcgccgccttcaccgcgaggagcgcgtcggcttcgccaccggccgccgccgtcgccgccgccgccacggcggcgaggaggacgacggcgaggtggtggtagtggaggcgcat
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| CDS seq | atgcgcctccactaccaccacctcgccgtcgtcctcctcgccgccgtggcggcggcggcgacggcggcggccggtggcgaagccgacgcgctcctcgcggtgaaggcggcgctcgacgacccgacgggcgcgctcgcgtcgtggacgacgaacaccacctcgagcccgtgcgcgtggtcgggcgtggcgtgcaacgcgcggggtgcggtggtggggctcgacgtgtccgggcgcaacctcaccggcggcttgcccggcgccgcgctgtcggggctgcagcacctggcgcgcctcgacctcgccgcgaacgcgctgtcggggcccattccggcggcgctgtcccgcctcgcgccgttcctcacccacctcaacctctccaacaacggcttcaatggcaccttcccgccgcagctgtcgcggctccgcgcgctccgggtgctcgacctctacaacaacaacctcaccggcgcgctcccgctcgaggtggtgtccatggcgcagctccgccacctccacctcggcggcaactttttctccggcgggatcccgcccgagtacggccggtgggggAGgctccagtacctcgccgtctccggcaacgagctctccgggaagataccaccggagctaggcaacctgacgagcctcagggagctctacatcggctacttcaacagctactccggtgggataccacccgagctcggcaacatgaccgacctcgtccgcctcgacgccgccaactgcggcctctccggcgagatcccaccggagttgggcaacctcgcgaacctggacacgctgttcctgcaggtgaacggcctcgccggcggcatcccgcgcgagctcggcaagctcgcgagcctcagctcgctcgacctgtccaacaacgcgctcgccggcgagatcccggcgacgttcgccgacctcaagaacctcaccctgctcaacctgttccggaacaagctgcgaggcgacatcccggagttcgtcggcgacctgcccagcctcgaggtgctgcagctatgggagaacaacttcacCggcgggatccctcgccggctgggccgcaacgggaggttccagctgctcgacctctcgtcgaaccgcctcaccggcacgctgccgccggacctctgcgccggcggcaagctggagacgctcatcgcgctcggcaactcgctcttcggcgccatccccgcctccctcggcaagtgcacgtcgctcacccgcgtccgcctcggcgacaactacctcaatggctccatccccgagggtctcttcgagctcccgaacctgactcaggtggagctccaggataatctcatctccggcggcttcccggcggtgtccggcaccggcgcgccgaatcttggccagattagcctctccaacaaccagctcaccggagcattgccggcgttcatcgggagcttctccgggcaattcagctacttcaatgccacatccttcgtcggcaacccgggattgtgcgggccgtacctcgggccatgccatcccggtgctcccggcactgaccatggcggccgcagccatggtggactctccaatagcttcaagctgctgattgtgctaggattgcttgccctttcaattgcatttgctgccatggcgatcttgaaggcccggtcactgaagaaggcgagtgaggcgcgtgcttggaagctcaccgcattccagcgcctcgaattcacctgcgacgatgtgcttgatagtctcaaggaggagaacatcattggcaaAggtggagctgggactgtgtacaaggggacaatgccggatggtgaacatgtcgcggtgaagcggcttcccgccatgagccgtggttcctcccatgatcacgggttctccgcggagattcagacgctcgggaggatccggcaccgctacattgtgaggttgctcggcttctgctcgaacaatgagacgaacctactcgtttacgagtatatgcccaatggcagccttggggagctactccatggcaagaagggtggccacctgcattgggacacaaggtacaagtatgcatatacgctcaaggtcgatgagaagagcgatgtctacagcttcggtgttgtgctccttgagctgatcaccggaaagaagccgggGGAGTTTGGGGATGGCGTCGACATCGTTCAGTGGGTCAAGACGATGACGGACTCGAACAAGGAACATGTGATCAAGATCTTGGACCCTAGGCTCTCAACTGTGCCGGTCCACGAGGTCATGCACGTCTTCTACGTCGCATTGCTTTGCGTCGAGGAGCAGAGCGTGCAGCGACCGACAATGAGGGAGGTGGTGCAGATCCTCAGTGAGCTTCCCAAGCCGACATCGAAGCAAGGAGAGGAGCCTCCTAGTGGTGAAGGTGCTGTGTCTGATCTTGTAGTGCCAGCTGAATCTGCAGAGGCCAATGAAGCCAAAGAGCAGCAGCAGCAGCAGCTAAACTCACCATCTTCACCGCCACCTGATCTCATCAGCATATGA
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| Protein seq | MRLHYHHLAVVLLAAVAAAATAAAGGEADALLAVKAALDDPTGALASWTTNTTSSPCAWSGVACNARGAVVGLDVSGRNLTGGLPGAALSGLQHLARLDLAANALSGPIPAALSRLAPFLTHLNLSNNGFNGTFPPQLSRLRALRVLDLYNNNLTGALPLEVVSMAQLRHLHLGGNFFSGGIPPEYGRWGRLQYLAVSGNELSGKIPPELGNLTSLRELYIGYFNSYSGGIPPELGNMTDLVRLDAANCGLSGEIPPELGNLANLDTLFLQVNGLAGGIPRELGKLASLSSLDLSNNALAGEIPATFADLKNLTLLNLFRNKLRGDIPEFVGDLPSLEVLQLWENNFTGGIPRRLGRNGRFQLLDLSSNRLTGTLPPDLCAGGKLETLIALGNSLFGAIPASLGKCTSLTRVRLGDNYLNGSIPEGLFELPNLTQVELQDNLISGGFPAVSGTGAPNLGQISLSNNQLTGALPAFIGSFSGQFSYFNATSFVGNPGLCGPYLGPCHPGAPGTDHGGRSHGGLSNSFKLLIVLGLLALSIAFAAMAILKARSLKKASEARAWKLTAFQRLEFTCDDVLDSLKEENIIGKGGAGTVYKGTMPDGEHVAVKRLPAMSRGSSHDHGFSAEIQTLGRIRHRYIVRLLGFCSNNETNLLVYEYMPNGSLGELLHGKKGGHLHWDTRYKYAYTLKVDEKSDVYSFGVVLLELITGKKPGEFGDGVDIVQWVKTMTDSNKEHVIKILDPRLSTVPVHEVMHVFYVALLCVEEQSVQRPTMREVVQILSELPKPTSKQGEEPPSGEGAVSDLVVPAESAEANEAKEQQQQQLNSPSSPPPDLISI |
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| Function | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [UniProtKB/Swiss-Prot:O49545] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_07g0002090 | OsLaMu_07g0002090.01 | Chr07 | 1694524 | 1697789 | - | NAM | ||
| CDS seq | atgcgcctccactaccaccacctcgccgtcgtcctcctcgccgccgtggcggcggcggcgacggcggcggccggtggcgaagccgacgcgctcctcgcggtgaaggcggcgctcgacgacccgacgggcgcgctcgcgtcgtggacgacgaacaccacctcgagcccgtgcgcgtggtcgggcgtggcgtgcaacgcgcggggtgcggtggtggggctcgacgtgtccgggcgcaacctcaccggcggcttgcccggcgccgcgctgtcggggctgcagcacctggcgcgcctcgacctcgccgcgaacgcgctgtcggggcccattccggcggcgctgtcccgcctcgcgccgttcctcacccacctcaacctctccaacaacggcttcaatggcaccttcccgccgcagctgtcgcggctccgcgcgctccgggtgctcgacctctacaacaacaacctcaccggcgcgctcccgctcgaggtggtgtccatggcgcagctccgccacctccacctcggcggcaactttttctccggcgggatcccgcccgagtacggccggtgggggAGgctccagtacctcgccgtctccggcaacgagctctccgggaagataccaccggagctaggcaacctgacgagcctcagggagctctacatcggctacttcaacagctactccggtgggataccacccgagctcggcaacatgaccgacctcgtccgcctcgacgccgccaactgcggcctctccggcgagatcccaccggagttgggcaacctcgcgaacctggacacgctgttcctgcaggtgaacggcctcgccggcggcatcccgcgcgagctcggcaagctcgcgagcctcagctcgctcgacctgtccaacaacgcgctcgccggcgagatcccggcgacgttcgccgacctcaagaacctcaccctgctcaacctgttccggaacaagctgcgaggcgacatcccggagttcgtcggcgacctgcccagcctcgaggtgctgcagctatgggagaacaacttcacCggcgggatccctcgccggctgggccgcaacgggaggttccagctgctcgacctctcgtcgaaccgcctcaccggcacgctgccgccggacctctgcgccggcggcaagctggagacgctcatcgcgctcggcaactcgctcttcggcgccatccccgcctccctcggcaagtgcacgtcgctcacccgcgtccgcctcggcgacaactacctcaatggctccatccccgagggtctcttcgagctcccgaacctgactcaggtggagctccaggataatctcatctccggcggcttcccggcggtgtccggcaccggcgcgccgaatcttggccagattagcctctccaacaaccagctcaccggagcattgccggcgttcatcgggagcttctccgggcaattcagctacttcaatgccacatccttcgtcggcaacccgggattgtgcgggccgtacctcgggccatgccatcccggtgctcccggcactgaccatggcggccgcagccatggtggactctccaatagcttcaagctgctgattgtgctaggattgcttgccctttcaattgcatttgctgccatggcgatcttgaaggcccggtcactgaagaaggcgagtgaggcgcgtgcttggaagctcaccgcattccagcgcctcgaattcacctgcgacgatgtgcttgatagtctcaaggaggagaacatcattggcaaAggtggagctgggactgtgtacaaggggacaatgccggatggtgaacatgtcgcggtgaagcggcttcccgccatgagccgtggttcctcccatgatcacgggttctccgcggagattcagacgctcgggaggatccggcaccgctacattgtgaggttgctcggcttctgctcgaacaatgagacgaacctactcgtttacgagtatatgcccaatggcagccttggggagctactccatggcaagaagggtggccacctgcattgggacacaaggtacaagtatgcatatacgctcaaggtcgatgagaagagcgatgtctacagcttcggtgttgtgctccttgagctgatcaccggaaagaagccgggGGAGTTTGGGGATGGCGTCGACATCGTTCAGTGGGTCAAGACGATGACGGACTCGAACAAGGAACATGTGATCAAGATCTTGGACCCTAGGCTCTCAACTGTGCCGGTCCACGAGGTCATGCACGTCTTCTACGTCGCATTGCTTTGCGTCGAGGAGCAGAGCGTGCAGCGACCGACAATGAGGGAGGTGGTGCAGATCCTCAGTGAGCTTCCCAAGCCGACATCGAAGCAAGGAGAGGAGCCTCCTAGTGGTGAAGGTGCTGTGTCTGATCTTGTAGTGCCAGCTGAATCTGCAGAGGCCAATGAAGCCAAAGAGCAGCAGCAGCAGCAGCTAAACTCACCATCTTCACCGCCACCTGATCTCATCAGCATATGA
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| Protein seq | MRLHYHHLAVVLLAAVAAAATAAAGGEADALLAVKAALDDPTGALASWTTNTTSSPCAWSGVACNARGAVVGLDVSGRNLTGGLPGAALSGLQHLARLDLAANALSGPIPAALSRLAPFLTHLNLSNNGFNGTFPPQLSRLRALRVLDLYNNNLTGALPLEVVSMAQLRHLHLGGNFFSGGIPPEYGRWGRLQYLAVSGNELSGKIPPELGNLTSLRELYIGYFNSYSGGIPPELGNMTDLVRLDAANCGLSGEIPPELGNLANLDTLFLQVNGLAGGIPRELGKLASLSSLDLSNNALAGEIPATFADLKNLTLLNLFRNKLRGDIPEFVGDLPSLEVLQLWENNFTGGIPRRLGRNGRFQLLDLSSNRLTGTLPPDLCAGGKLETLIALGNSLFGAIPASLGKCTSLTRVRLGDNYLNGSIPEGLFELPNLTQVELQDNLISGGFPAVSGTGAPNLGQISLSNNQLTGALPAFIGSFSGQFSYFNATSFVGNPGLCGPYLGPCHPGAPGTDHGGRSHGGLSNSFKLLIVLGLLALSIAFAAMAILKARSLKKASEARAWKLTAFQRLEFTCDDVLDSLKEENIIGKGGAGTVYKGTMPDGEHVAVKRLPAMSRGSSHDHGFSAEIQTLGRIRHRYIVRLLGFCSNNETNLLVYEYMPNGSLGELLHGKKGGHLHWDTRYKYAYTLKVDEKSDVYSFGVVLLELITGKKPGEFGDGVDIVQWVKTMTDSNKEHVIKILDPRLSTVPVHEVMHVFYVALLCVEEQSVQRPTMREVVQILSELPKPTSKQGEEPPSGEGAVSDLVVPAESAEANEAKEQQQQQLNSPSSPPPDLISI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_07g0002090 | OsLaMu_07g0002090.02 | Chr07 | 1694165 | 1695404 | - | IsoSeq | ||
| CDS seq | acaaggttgctgttgaggctgccaaggggctctgctacctgcaccatgattgctcaccgccgatattgcaccgcgatgtcaagtcgaacaacattctccttgactccgatttcgaagcgcatgttgctgacttcgggcttgccaagttcttgcaggactctggcacatcagagtgcatgtctgcaattgctggctcttatggttatattgctccagagtatgcatatacgctcaaggtcgatgagaagagcgatgtctacagcttcggtgttgtgctccttg
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| Protein seq | TRLLLRLPRGSATCTMIAHRRYCTAMSSRTTFSLTPISKRMLLTSGLPSSCRTLAHQSACLQLLALMVILLQSMHIRSRSMRRAMSTASVLCSL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 10.391031 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0134200 | RBH | 0.233419 | 0.0 | 4.916533 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g04190 | RBH | 0.146403 | 0.0 | 1.199921 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0134200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0002070 | RBH | 0.051151 | 7.063178 | 11.964034 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0002060 | RBH | 0.035081 | 3.815719 | 3.028505 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0001970 | RBH | 0.0 | 1.198956 | 8.447635 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0002070 | RBH | 0.0 | 0.205411 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0002010 | RBH | 0.281862 | 9.242097 | 18.755421 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0030000 | RBH | 10.2576395 | 14.492529 | 24.138113 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0002070 | RBH | 0.0 | 0.214792 | 0.879923 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0034700 | RBH | 10.256598 | 6.1969705 | 45.071972 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0002120 | RBH | 0.030324 | 0.145738 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0002110 | RBH | 0.0 | 11.200659 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0002100 | RBH | 0.0 | 9.243786 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0002190 | RBH | 0.093658 | 0.620749 | 0.305994 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0002000 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G002190 | RBH | 0.0 | 4.168733 | 9.080778 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0002100 | RBH | 0.129743 | 10.784695 | 7.256495 |
