Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_06g0006670 | OGI:06014120 | 15/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr06:4908959-4914141 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcgcatatgcatcccaaacaaccttggagtacctcaaaagaaaacgtcaagaacatgcaagaacaaccggatgggaatggaatgtgaattgaatgaagctatgtataattttacactgtattctgttgtcaggctattctcctgctgcctcttttaatatacaactacaagaaaattacagtgctgcaacagcggccattttttttaggtttttcttttCcctacatctctttctcctttttttgttttgcttcttttttcttcgtgctgctgacctaagagatgttagaacaccacaacacggagcaaaccaggttgtgcctgcgtgtagtggaggccttcctccagaagaaactgctcgacggcgatgggcagcctggcggtgcgagaacccttggtgtgatgacctgtcccgacacatatcatgacttgcatcctctcacctgtagccctcgcggtgctcttaagagtaccgagctcgaccttaagtatatggattgcttcgttcacatggagaccatgtagatcgatcagacggtcgctccctcgttgcgaagatgggttcctgaggaacattgcaacaaaaacatatgatatgttaagtgtacttgtaaatattaggaacagtacaaggcgcagcttgtcaatcgggtggacaaagtataaattggcatgaaaaggattttccatccagcgcagaaagaacagggaaccagttaggcgacctctgtcgataaatagcttctcttgctttctcatgagatgctttcatttgtgtgttatatgtctgtcccttcatactcaattccttggctagagctttgttgccaatcaggtaagcctgtctagcctgtcaagtagatctttatgtaaatacttcagctaaaagatgtaaacaagttacatattgtattataatttcaattcactcataagcaaaagatacagcaaatgaggtcagctaaatgaacgtcagtgatgtggtggacatgataataggcacaaaccaattttcatactcaaaatataagtaataaaaggaattgaagaggttatactaagagtagcatgtaaacatcaatatttgatgatacaacaaccgtgtAaaaaattattaataaacgaaatgccagaggctaaatttttaatagtggatggatggaatgcatattacatggcgatagtacacacaaacaaattgatacaggatgataaatggcaaaatttatagggtcaaaatggaagtagatattttatcaagaaacaatacaaggctactggtgcaggtaagttgtataagcatgtggcacatttcactcgtacacccatggatgcaaatgcatacgagatgcaactgagaccacaatggatgatgcttacctgctcaaaacatgcatttcggatgcgggcaaaatcacgggcttctccccttgattctgagtacatgtttgctattgatttgcatataaacataaagagatcagtctatagttgtggaacagaataaatcatcaaacatacaggagggaaacacgctatccacacaaatgacttggtatatcaagatgggcattacctactgcatctccagtttcgagccatggagcagctcttgcactgctaacactttgaaacttgtttccagaagatgttttggtcgtagaactgtactgcttgggtacagaaacagttgaaacaccattaccgtattcaggacctttcttatacttccaatggccagaattttgcgatgcaagtttgcgaacagctgaaacaaaatcaccagtaccagtagatacagagggtgagctgcgtccattgaagatgcttagaatatctgcattgcctttggaaaaaccattttggtcttcaactgttggcagtgcggggaagtcccctgtgctaaagtttggtgtcctgggggtcagagttggattggaggtagcatcaacttgcatctgaaaaacaaaaatgatatcactagacagacaatgtaaaaactgttaaacatgctagtgcccgcagaagatcaagatggtcagcatgacaatgggatgcaagtgcaactgcaaccagttattgctgcgttcctaacgagctctaccaaaaaagagtaaatttcagaaaactgcaactatagtgacaaaactatcagtttactgcaacattagtgatttatttcagtttgctgcaacaatagcgtgggacattatcacaaaactgcaacttttacgtgatatgctgctacaggacatgtaggtgacaactgtagcagcatatcacgtaaaagttacagttttgtgataatttcccacgctattgttgcaacaaactgaaatatatcactaatgttgcagcaaactgatagttgtcactatagttgcagttttctgaaatttgctcaccaaaaaaaatgcaatatgactagcaattttgagcaatattttgggtggatatgaagtaaagaagtagcattgatttacgtgccagtttcactgacagaagggattacctctagctgggtgaggatttcaatagtatggttgaagtcacatccattagcatagtacagctctgcaaggctctctgatgaaaaatcaggaaactgtgaagctaaatacgctagggggtcaagaacatcgtctgttgctgcagcataatcgctagcaaaactgtcagaaaagcctgcagcactttcagaatcataatgaaggccctgatttccattcgtaaaatggagatcccctacaaaaTtttgctcccaattgcttgaacccatagttggaaacgatgcttgtgaattatcttcataaagtaaactggtaagccccagttccaggctcttgttagcttgagaagataaatcatgctctcttgaaaagcggctagctgttgttccatagaaagggggtgcattcaaggataatccagcaagagacaattcttcaggttcttgttcaattttctcaaaactgaagtctggaataatgtcatcaggaagctgcttacgccaaaactggtgtgcctcatcatccgagttatttgactttgatgactcggacctatctaggatagttttcccagaagccctaagatctgccttacttacatctgagacagcgctactctcaaaagatggtctaatacatgaaggtacaaattctgctgcgttgggattcaatgctgtgactttatttggcaacattgaccttgtatctccattggaaacaactttattgagtgaagtcatttttaatagaaattacatgtgatgttacatgtacaaggggaaatttgcaataagattttatccaagccctgcaaagatatcaacaaggattagcatgaacatggctgagcacttgatgtaccacaatcacgtcaacctttaccaaaagattatatatgaacaaataggtgtaatttaacagaaaatataacttccataatattaataaactagtatttgtcaactcaaaaaaagaaactagtatttttgttaataagcaagacaatatgctaacctacaggtaaggctcactagagctagtaatctttgtcagactcaataaaattgatagtgttgtgggaaatttcatttcaaccctattataaaataccaaaaacaaataaaccaactacaagaacaacagctagttcttgctattagggcaataaatatttagaacaaaacaaTttaattacttcatagtatgtccataaattaaagccagcaagccgctgcatcatacaaagattgaagataacacaataggatatataaggctggacaaatggacaaggattcagttatacaagttcttaaaaagtaaaaatctacaagccgtttactttccgttaggattcataaaatattttgtttgtttgttttcactgccagggagaaataCcacaatcaatgcgactgatactgataatagaaatttccacattcacagaagacccaaaatcagtagctctgtcaaccaaaaaaagaagagaacttctaatgatttgctcccagtttccacaaaattggcgcgactcttcttagtaactcatatagctgccgtcgcaaaagaagcaagttttctgacacattatctcaatatctcctccataaattcatcaattaaataggctcaatatctcctccttccgtccttcgttctcacataccgacacgctgttctctcacccaaacgtatatagaaaccatcaaatcagtaagaaaggaaccataacaaaagaaacagaagcttattgctgtttttttggaaaggaaagagaagatatcctcaaaagtccacgcaactccatctctaacacagaaaagggaagattgtacaatcaaaagaggcaaaagagcaacggaaagacgagcaaacagtacccccttgcttttcctctccgtccagcacacgcacgctaaacaccccacgccctcctccccgtctccccggccggtggcgagatgcctcaatcaaaaaaaaatcacgccttttccgggttttccctaacccggacaatcaacggaacAaaaaaaaaaatcctaacgccgggcgagatctacacccccagatctacccggaacccggggggagccagcgccagatctggagaggagaaaaggccgggagggtgttaattaattacctttccgccggtcgatgagctgatagtgatatatcgctggcgaccggcccatggggcggcgtcccccccaacgccgacggtagatgagaaacggacgccgccgcccgcagggggattcgggtttcaccgcccaatcgcgcaacgggagtccggCcccccCGCTCCGGGAGAATCGGGGGCGGAATAGGGTTCGCCTTCTTGGGAGGCGGAGGCGGAGGCGGAGGCGAGGAGAGGGGAGGGAGGAGGGAGAGGTTGGTGCGGATGGGGGTGGGGGTGGATAGGTGAGGGATGGTGGAGTTTGACCCGTCGGGGCGGGGGGTGGGGGTGTgggggcccaccgtggcgtggaggagaagcgggtgggtggtggtggcggcctcgggatcgggggcgccgctgcgaggctgaggtggcttggcttgggttggttggctggctggttgcgttgttgcgcggcgctgcggggtgcggggggaatatgcgggcgggtgatgcgagcgagcgtgccaggaaatctctcgaactat
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| CDS seq | atgacttcactcaataaagttgtttccaatggagatacaaggtcaatgttgccaaataaagtcacagcattgaatcccaacgcagcagaatttgtaccttcatgtattagaccatcttttgagagtagcgctgtctcagatgtaagtaaggcagatcttagggcttctgggaaaactatcctagataggtccgagtcatcaaagtcaaataactcggatgatgaggcacaccagttttggcgtaagcagcttcctgatgacattattccagacttcagttttgagaaaattgaacaagaacctgaagaattgtctcttgctggattatccttgaatgcaccccctttctatggaacaacagctagccgcttttcaagagagcatgatttatcttctcaagctaacaagagcctggaactggggcttaccagtttactttatgaagataattcacaagcatcgtttccaactatgggttcaagcaattgggagcaaaAttttgtaggggatctccattttacgaatggaaatcagggccttcattatgattctgaaagtgctgcaggcttttctgacagttttgctagcgattatgctgcagcaacagacgatgttcttgaccccctagcgtatttagcttcacagtttcctgatttttcatcagagagccttgcagagctgtactatgctaatggatgtgacttcaaccatactattgaaatcctcacccagctagagatgcaagttgatgctacctccaatccaactctgacccccaggacaccaaactttagcacaggggacttccccgcactgccaacagttgaagaccaaaatggtttttccaaaggcaatgcagatattctaagcatcttcaatggacgcagctcaccctctgtatctactggtactggtgattttgtttcagctgttcgcaaacttgcatcgcaaaattctggccattggaagtataagaaaggtcctgaatacggtaatggtgtttcaactgtttctgtacccaagcagtacagttctacgaccaaaacatcttctggaaacaagtttcaaagtgttagcagtgcaagagctgctccatggctcgaaactggagatgcagtagcaaacatgtactcagaatcaaggggagaagcccgtgattttgcccgcatccgaaatgcatgttttgagcaggctagacaggcttacctgattggcaacaaagctctagccaaggaattgagtatgaagggacagacatataacacacaaatgaaagcatctcatgagaaagcaagagaagctatttatcgacagaggtcgcctaactggaacccatcttcgcaacgagggagcgaccgtctgatcgatctacatggtctccatgtgaacgaagcaatccatatacttaaggtcgagctcggtactcttaagagcaccgcgagggctacaggtgagaggatgcaagtcatgatatgtgtcgggacaggtcatcacaccaagggttctcgcaccgccaggctgcccatcgccgtcgagcagtttcttctggaggaaggcctccactacacgcaggcacaacctggtttgctccgtgttgtggtgttctaa
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| Protein seq | MTSLNKVVSNGDTRSMLPNKVTALNPNAAEFVPSCIRPSFESSAVSDVSKADLRASGKTILDRSESSKSNNSDDEAHQFWRKQLPDDIIPDFSFEKIEQEPEELSLAGLSLNAPPFYGTTASRFSREHDLSSQANKSLELGLTSLLYEDNSQASFPTMGSSNWEQNFVGDLHFTNGNQGLHYDSESAAGFSDSFASDYAAATDDVLDPLAYLASQFPDFSSESLAELYYANGCDFNHTIEILTQLEMQVDATSNPTLTPRTPNFSTGDFPALPTVEDQNGFSKGNADILSIFNGRSSPSVSTGTGDFVSAVRKLASQNSGHWKYKKGPEYGNGVSTVSVPKQYSSTTKTSSGNKFQSVSSARAAPWLETGDAVANMYSESRGEARDFARIRNACFEQARQAYLIGNKALAKELSMKGQTYNTQMKASHEKAREAIYRQRSPNWNPSSQRGSDRLIDLHGLHVNEAIHILKVELGTLKSTARATGERMQVMICVGTGHHTKGSRTARLPIAVEQFLLEEGLHYTQAQPGLLRVVVF |
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| Function | Polyadenylate-binding protein-interacting protein 7 [UniProtKB/Swiss-Prot:O64843] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_06g0006670 | OsLaMu_06g0006670.02 | Chr06 | 4908959 | 4914141 | - | NAM | ||
| CDS seq | atgacttcactcaataaagttgtttccaatggagatacaaggtcaatgttgccaaataaagtcacagcattgaatcccaacgcagcagaatttgtaccttcatgtattagaccatcttttgagagtagcgctgtctcagatgtaagtaaggcagatcttagggcttctgggaaaactatcctagataggtccgagtcatcaaagtcaaataactcggatgatgaggcacaccagttttggcgtaagcagcttcctgatgacattattccagacttcagttttgagaaaattgaacaagaacctgaagaattgtctcttgctggattatccttgaatgcaccccctttctatggaacaacagctagccgcttttcaagagagcatgatttatcttctcaagctaacaagagcctggaactggggcttaccagtttactttatgaagataattcacaagcatcgtttccaactatgggttcaagcaattgggagcaaaAttttgtaggggatctccattttacgaatggaaatcagggccttcattatgattctgaaagtgctgcaggcttttctgacagttttgctagcgattatgctgcagcaacagacgatgttcttgaccccctagcgtatttagcttcacagtttcctgatttttcatcagagagccttgcagagctgtactatgctaatggatgtgacttcaaccatactattgaaatcctcacccagctagagatgcaagttgatgctacctccaatccaactctgacccccaggacaccaaactttagcacaggggacttccccgcactgccaacagttgaagaccaaaatggtttttccaaaggcaatgcagatattctaagcatcttcaatggacgcagctcaccctctgtatctactggtactggtgattttgtttcagctgttcgcaaacttgcatcgcaaaattctggccattggaagtataagaaaggtcctgaatacggtaatggtgtttcaactgtttctgtacccaagcagtacagttctacgaccaaaacatcttctggaaacaagtttcaaagtgttagcagtgcaagagctgctccatggctcgaaactggagatgcagtagcaaacatgtactcagaatcaaggggagaagcccgtgattttgcccgcatccgaaatgcatgttttgagcaggctagacaggcttacctgattggcaacaaagctctagccaaggaattgagtatgaagggacagacatataacacacaaatgaaagcatctcatgagaaagcaagagaagctatttatcgacagaggtcgcctaactggttccctgttctttctgcgctggatggaaaatccttttcatgccaatttatactttgtccacccgattga
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| Protein seq | MTSLNKVVSNGDTRSMLPNKVTALNPNAAEFVPSCIRPSFESSAVSDVSKADLRASGKTILDRSESSKSNNSDDEAHQFWRKQLPDDIIPDFSFEKIEQEPEELSLAGLSLNAPPFYGTTASRFSREHDLSSQANKSLELGLTSLLYEDNSQASFPTMGSSNWEQNFVGDLHFTNGNQGLHYDSESAAGFSDSFASDYAAATDDVLDPLAYLASQFPDFSSESLAELYYANGCDFNHTIEILTQLEMQVDATSNPTLTPRTPNFSTGDFPALPTVEDQNGFSKGNADILSIFNGRSSPSVSTGTGDFVSAVRKLASQNSGHWKYKKGPEYGNGVSTVSVPKQYSSTTKTSSGNKFQSVSSARAAPWLETGDAVANMYSESRGEARDFARIRNACFEQARQAYLIGNKALAKELSMKGQTYNTQMKASHEKAREAIYRQRSPNWFPVLSALDGKSFSCQFILCPPD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_06g0006670 | OsLaMu_06g0006670.03 | Chr06 | 4909015 | 4913883 | - | NAM | ||
| CDS seq | atgacttcactcaataaagttgtttccaatggagatacaaggtcaatgttgccaaataaagtcacagcattgaatcccaacgcagcagaatttgtaccttcatgtattagaccatcttttgagagtagcgctgtctcagatgtaagtaaggcagatcttagggcttctgggaaaactatcctagataggtccgagtcatcaaagtcaaataactcggatgatgaggcacaccagttttggcgtaagcagcttcctgatgacattattccagacttcagttttgagaaaattgaacaagaacctgaagaattgtctcttgctggattatccttgaatgcaccccctttctatggaacaacagctagccgcttttcaagagagcatgatttatcttctcaagctaacaagagcctggaactggggcttaccagtttactttatgaagataattcacaagcatcgtttccaactatgggttcaagcaattgggagcaaaAttttgtaggggatctccattttacgaatggaaatcagggccttcattatgattctgaaagtgctgcaggcttttctgacagttttgctagcgattatgctgcagcaacagacgatgttcttgaccccctagcgtatttagcttcacagtttcctgatttttcatcagagagccttgcagagctgtactatgctaatggatgtgacttcaaccatactattgaaatcctcacccagctagagatgcaagttgatgctacctccaatccaactctgacccccaggacaccaaactttagcacaggggacttccccgcactgccaacagttgaagaccaaaatggtttttccaaaggcaatgcagatattctaagcatcttcaatggacgcagctcaccctctgtatctactggtactggtgattttgtttcagctgttcgcaaacttgcatcgcaaaattctggccattggaagtataagaaaggtcctgaatacggtaatggtgtttcaactgtttctgtacccaagcagtacagttctacgaccaaaacatcttctggaaacaagtttcaaagtgttagcagtgcaagagctgctccatggctcgaaactggagatgcagtagcaaacatgtactcagaatcaaggggagaagcccgtgattttgcccgcatccgaaatgcatgttttgagcaggctagacaggcttacctgattggcaacaaagctctagccaaggaattgagtatgaagggacagacatataacacacaaatgaaagcatctcatgagaaagcaagagaagctatttatcgacagaggaacccatcttcgcaacgagggagcgaccgtctgatcgatctacatggtctccatgtgaacgaagcaatccatatacttaaggtcgagctcggtactcttaagagcaccgcgagggctacaggtgagaggatgcaagtcatgatatgtgtcgggacaggtcatcacaccaagggttctcgcaccgccaggctgcccatcgccgtcgagcagtttcttctggaggaaggcctccactacacgcaggcacaacctggtttgctccgtgttgtggtgttctaa
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| Protein seq | MTSLNKVVSNGDTRSMLPNKVTALNPNAAEFVPSCIRPSFESSAVSDVSKADLRASGKTILDRSESSKSNNSDDEAHQFWRKQLPDDIIPDFSFEKIEQEPEELSLAGLSLNAPPFYGTTASRFSREHDLSSQANKSLELGLTSLLYEDNSQASFPTMGSSNWEQNFVGDLHFTNGNQGLHYDSESAAGFSDSFASDYAAATDDVLDPLAYLASQFPDFSSESLAELYYANGCDFNHTIEILTQLEMQVDATSNPTLTPRTPNFSTGDFPALPTVEDQNGFSKGNADILSIFNGRSSPSVSTGTGDFVSAVRKLASQNSGHWKYKKGPEYGNGVSTVSVPKQYSSTTKTSSGNKFQSVSSARAAPWLETGDAVANMYSESRGEARDFARIRNACFEQARQAYLIGNKALAKELSMKGQTYNTQMKASHEKAREAIYRQRNPSSQRGSDRLIDLHGLHVNEAIHILKVELGTLKSTARATGERMQVMICVGTGHHTKGSRTARLPIAVEQFLLEEGLHYTQAQPGLLRVVVF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_06g0006670 | OsLaMu_06g0006670.01 | Chr06 | 4908959 | 4914141 | - | NAM | ||
| CDS seq | atgacttcactcaataaagttgtttccaatggagatacaaggtcaatgttgccaaataaagtcacagcattgaatcccaacgcagcagaatttgtaccttcatgtattagaccatcttttgagagtagcgctgtctcagatgtaagtaaggcagatcttagggcttctgggaaaactatcctagataggtccgagtcatcaaagtcaaataactcggatgatgaggcacaccagttttggcgtaagcagcttcctgatgacattattccagacttcagttttgagaaaattgaacaagaacctgaagaattgtctcttgctggattatccttgaatgcaccccctttctatggaacaacagctagccgcttttcaagagagcatgatttatcttctcaagctaacaagagcctggaactggggcttaccagtttactttatgaagataattcacaagcatcgtttccaactatgggttcaagcaattgggagcaaaAttttgtaggggatctccattttacgaatggaaatcagggccttcattatgattctgaaagtgctgcaggcttttctgacagttttgctagcgattatgctgcagcaacagacgatgttcttgaccccctagcgtatttagcttcacagtttcctgatttttcatcagagagccttgcagagctgtactatgctaatggatgtgacttcaaccatactattgaaatcctcacccagctagagatgcaagttgatgctacctccaatccaactctgacccccaggacaccaaactttagcacaggggacttccccgcactgccaacagttgaagaccaaaatggtttttccaaaggcaatgcagatattctaagcatcttcaatggacgcagctcaccctctgtatctactggtactggtgattttgtttcagctgttcgcaaacttgcatcgcaaaattctggccattggaagtataagaaaggtcctgaatacggtaatggtgtttcaactgtttctgtacccaagcagtacagttctacgaccaaaacatcttctggaaacaagtttcaaagtgttagcagtgcaagagctgctccatggctcgaaactggagatgcagtaggtaatgcccatcttgatataccaagtcatttgtgtggatag
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| Protein seq | MTSLNKVVSNGDTRSMLPNKVTALNPNAAEFVPSCIRPSFESSAVSDVSKADLRASGKTILDRSESSKSNNSDDEAHQFWRKQLPDDIIPDFSFEKIEQEPEELSLAGLSLNAPPFYGTTASRFSREHDLSSQANKSLELGLTSLLYEDNSQASFPTMGSSNWEQNFVGDLHFTNGNQGLHYDSESAAGFSDSFASDYAAATDDVLDPLAYLASQFPDFSSESLAELYYANGCDFNHTIEILTQLEMQVDATSNPTLTPRTPNFSTGDFPALPTVEDQNGFSKGNADILSIFNGRSSPSVSTGTGDFVSAVRKLASQNSGHWKYKKGPEYGNGVSTVSVPKQYSSTTKTSSGNKFQSVSSARAAPWLETGDAVGNAHLDIPSHLCG
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_06g0006670 | OsLaMu_06g0006670.04 | Chr06 | 4908959 | 4913576 | - | NAM | ||
| CDS seq | atgacttcactcaataaagttgtttccaatggagatacaaggtcaatgttgccaaataaagtcacagcattgaatcccaacgcagcagaatttgtaccttcatgtattagaccatcttttgagagtagcgctgtctcagatgtaagtaaggcagatcttagggcttctgggaaaactatcctagataggtccgagtcatcaaagtcaaataactcggatgatgaggcacaccagttttggcgtaagcagcttcctgatgacattattccagacttcagttttgagaaaattgaacaagaacctgaagaattgtctcttgctggattatccttgaatgcaccccctttctatggaacaacagctagccgcttttcaagagagcatgatttatcttctcaagctaacaagagcctggaactggggcttaccagtttactttatgaagataattcacaagcatcgtttccaactatgggttcaagcaattgggagcaaaAttttgtaggggatctccattttacgaatggaaatcagggccttcattatgattctgaaagtgctgcaggcttttctgacagttttgctagcgattatgctgcagcaacagacgatgttcttgaccccctagcgtatttagcttcacagtttcctgatttttcatcagagagccttgcagagctgtactatgctaatggatgtgacttcaaccatactattgaaatcctcacccagctagagatgcaagttgatgctacctccaatccaactctgacccccaggacaccaaactttagcacaggggacttccccgcactgccaacagttgaagaccaaaatggtttttccaaaggcaatgcagatattctaagcatcttcaatggacgcagctcaccctctgtatctactggtactggtgattttgtttcagctgttcgcaaacttgcatcgcaaaattctggccattggaagtataagaaaggtcctgaatacggtaatggtgtttcaactgtttctgtacccaagcagtacagttctacgaccaaaacatcttctggaaacaagtttcaaagtgttagcagtgcaagagctgctccatggctcgaaactggagatgcagtagcaaacatgtactcagaatcaaggggagaagcccgtgattttgcccgcatccgaaatgcatgttttgagcaggctagacaggcttacctgattggcaacaaagctctagccaaggaattgagtatgaagggacagacatataacacacaaatgaaagcatctcatgagaaagcaagagaagctatttatcgacagaggtcgcctaactggaacccatcttcgcaacgagggagcgaccgtctgatcgatctacatggtctccatgtgaacgaagcaatccatatacttaaggtcgagctcggtactcttaagagcaccgcgagggctacaggtgagaggatgcaagtcatgatatgtgtcgggacaggtcatcacaccaagggttctcgcaccgccaggctgcccatcgccgtcgagcagtttcttctggaggaaggcctccactacacgcaggcacaacctggtttgctccgtgttgtggtgttctaa
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| Protein seq | MTSLNKVVSNGDTRSMLPNKVTALNPNAAEFVPSCIRPSFESSAVSDVSKADLRASGKTILDRSESSKSNNSDDEAHQFWRKQLPDDIIPDFSFEKIEQEPEELSLAGLSLNAPPFYGTTASRFSREHDLSSQANKSLELGLTSLLYEDNSQASFPTMGSSNWEQNFVGDLHFTNGNQGLHYDSESAAGFSDSFASDYAAATDDVLDPLAYLASQFPDFSSESLAELYYANGCDFNHTIEILTQLEMQVDATSNPTLTPRTPNFSTGDFPALPTVEDQNGFSKGNADILSIFNGRSSPSVSTGTGDFVSAVRKLASQNSGHWKYKKGPEYGNGVSTVSVPKQYSSTTKTSSGNKFQSVSSARAAPWLETGDAVANMYSESRGEARDFARIRNACFEQARQAYLIGNKALAKELSMKGQTYNTQMKASHEKAREAIYRQRSPNWNPSSQRGSDRLIDLHGLHVNEAIHILKVELGTLKSTARATGERMQVMICVGTGHHTKGSRTARLPIAVEQFLLEEGLHYTQAQPGLLRVVVF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_06g0006670 | OsLaMu_06g0006670.05 | Chr06 | 4909028 | 4910241 | - | IsoSeq | ||
| CDS seq | atgtgtcgggacaggtcatcacaccaagggttctcgcaccgccaggctgcccatcgccgtcgagcagtttcttctggaggaaggcctccactacacgcaggcacaacctggtttgctccgtgttgtggtgttctaacatctcttaggtcagcagcacgaagaaaaaagaagcaaaacaaaaaaaggagaaagagatgtaggGaaaagaaaaacctaaaaaaaatggccgctgttgcagca
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| Protein seq | MCRDRSSHQGFSHRQAAHRRRAVSSGGRPPLHAGTTWFAPCCGVLTSLRSAARRKKKQNKKRRKRCREKKNLKKMAAVAA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr06 | 4908959 | 4909808 | - | OsLaMu_06g0006670.01,OsLaMu_06g0006670.02 | OsLaMu_06g0006670.02,OsLaMu_06g0006670.01,OsLaMu_06g0006670.04 | All |
| RI | Chr06 | 4910339 | 4910916 | - | OsLaMu_06g0006670.01 | OsLaMu_06g0006670.02,OsLaMu_06g0006670.04,OsLaMu_06g0006670.03,OsLaMu_06g0006670.01 | All |
| A5 | Chr06 | 4909523 | 4909684 | - | OsLaMu_06g0006670.04 | OsLaMu_06g0006670.03,OsLaMu_06g0006670.04 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.865798 | 38.497272 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0199200 | RBH | 7.938113 | 10.778780 | 14.644678 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g09890 | RBH | 7.463464 | 8.455052 | 4.659540 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0199200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0006850 | RBH | 6.440076 | 37.020550 | 35.366318 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0006680 | RBH | 2.843285 | 17.019947 | 12.696025 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0006680 | RBH | 9.185112 | 62.024563 | 50.575840 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0006780 | RBH | 1.747819 | 1.372794 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0006680 | RBH | 51.873032 | 66.913101 | 60.896065 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0083900 | SBH | 26.07643 | 33.760252 | 21.6520735 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0006510 | RBH | 2.430505 | 3.534968 | 7.599492 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0083000 | RBH | 38.396928 | 80.750233 | 25.9937865 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0006890 | RBH | 1.849923 | 1.361536 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0006760 | RBH | 4.677634 | 53.191830 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0006800 | RBH | 38.525772 | 85.191193 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0006810 | RBH | 7.600791 | 3.496069 | 3.724211 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0035270 | RBH | 0.369917 | 7.013033 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G006520 | RBH | 2.943326 | 10.051673 | 13.277435 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0006800 | RBH | 12.717911 | 92.734955 | 38.959793 |
