Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_05g0009500 | OGI:06051710 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr05:10454852-10455734 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ggacagcaagcacagaggttactaaattaaggacaaacgagttcttagttactattacatccatccaacaagttcttacataaatggagtacatggcagccatattacatatattacataccatgattttcttccaaaatgggccaccatatacctagcgtattccttaagcttgtccttaagtcatactaccgtggcagtagaggttagataggactattgcttagtctctcatcctcagcttgaagactcgaccataccattgaacatactctggcggtccatacggtccagtggttccaagtggaggataagcagtcctgacatcgacgcgcgaaggtgggcttctttcaaaatacattccaacaggtggtggtatatcttctgctggtgcaagcatggcatcctcaccaaacatgaactccgatgtataatgtccctggcgataccttggcataatgcttctttctaaagtggctaccctggtgcggacgcgttgcagctcagcaaaggttgagcgataaagcatatctagtgagcgcacaaagtttgcaagttggaggtatggggtatgtagtcctacacctatttcagctaaccctgggtaggtagtgtgttgagctccctcagttaaggatggaacgtagcagtaaaattcttctatctcaggtagctcatagcgaaggcggatgatagcaacataagcacagttttgcaaagcggacttaatatcccacccataaccagtatattgaaggtctttctctagtggagttctaccccgaatgcttacacgaaccatgactgcggtttgggatgttccaataggtttcttgaggatatgatactcaggtggataggtgaatcgggcgtactgaagcat
More
|
||||||||||
| CDS seq | atgcttcagtacgcccgattcacctatccacctgagtatcatatcctcaagaaacctattggaacatcccaaaccgcagtcatggttcgtgtaagcattcggggtagaactccactagagaaagaccttcaatatactggttatgggtgggatattaagtccgctttgcaaaactgtgcttatgttgctatcatccgccttcgctatgagctacctgagatagaagaattttactgctacggacattatacatcggagttcatgtttggtgaggatgccatgcttgcaccagcagaagatataccaccacctgttggaatgtattttgaaagaagcccaccttcgcgcgtcgatgtcaggactgcttatcctccacttggaaccactggaccgtatggaccgccagagtatgttcaatggtatggtcgagtcttcaagctgaggatgagagactaa
More
|
||||||||||
| Protein seq | MLQYARFTYPPEYHILKKPIGTSQTAVMVRVSIRGRTPLEKDLQYTGYGWDIKSALQNCAYVAIIRLRYELPEIEEFYCYGHYTSEFMFGEDAMLAPAEDIPPPVGMYFERSPPSRVDVRTAYPPLGTTGPYGPPEYVQWYGRVFKLRMRD |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_05g0009500 | OsLaMu_05g0009500.01 | Chr05 | 10454852 | 10455734 | - | NAM | ||
| CDS seq | atgcttcagtacgcccgattcacctatccacctgagtatcatatcctcaagaaacctattggaacatcccaaaccgcagtcatggttcgtgtaagcattcggggtagaactccactagagaaagaccttcaatatactggttatgggtgggatattaagtccgctttgcaaaactgtgcttatgttgctatcatccgccttcgctatgagctacctgagatagaagaattttactgctacggacattatacatcggagttcatgtttggtgaggatgccatgcttgcaccagcagaagatataccaccacctgttggaatgtattttgaaagaagcccaccttcgcgcgtcgatgtcaggactgcttatcctccacttggaaccactggaccgtatggaccgccagagtatgttcaatggtatggtcgagtcttcaagctgaggatgagagactaa
More
|
|||||||
| Protein seq | MLQYARFTYPPEYHILKKPIGTSQTAVMVRVSIRGRTPLEKDLQYTGYGWDIKSALQNCAYVAIIRLRYELPEIEEFYCYGHYTSEFMFGEDAMLAPAEDIPPPVGMYFERSPPSRVDVRTAYPPLGTTGPYGPPEYVQWYGRVFKLRMRD |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0267766 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g18446 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0267732 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0009480 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0009530 | RBH | 0.043646 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0009440 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0009520 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0009600 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0009460 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0009430 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0009360 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0009470 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0009510 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0009480 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
