Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_05g0009280 | OGI:05025550 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr05:9331355-9341533 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | acaatcccaacaatgttgcctcgccgccagtccagtctccagtccagcaaagagagcgagaccagaaaagagacaaacgcgtggagacagatcgatagcgatgcGgcctagcatggccggtgtcTtcacccatctcgcgtggccgctgcttgtgcttGTGCTGTGCTCATGGCGgattatcgcagctgctcaggctcagccgcgaactgatccaGtcgaaggtgagtacGTtatcaTcatcacgcagtaaTtgttacttcaactgttcaagcgtcttactaGttaGcttctttggttaatattgagttcgctaaccccgcgcgtgattgcagcggcggcgttgaacacgatcctggggaGatggggcaagacggcgtcgccggagtggaacatcagcggcgagctctgcagcggcgtcgcctccgacctgtccaactgggacgactACCcAaatctCAacccgttcatcAagtgcgactgcaagtacaacAacgggaccctctgccacatcaacaaactgtaagtacatacacccccacctccatcatctcctgTtttcatagATaaGctgtatgcAcaccaggtgctcgacgcattgccttgcctgcctaaaagaatccatggcacagtcgactgaaagcttgtgcgatatgataaatctgacaagtgatggtgtttggattactaTttgcatagtggtttgtttggggtgggtGgtaaggggaggcgggtatggcTGttgaccagagcagaggcgagctgagcgaagttgagtcgccggCggccgcggcgtaggagcttaggtggtgtggagagtggagacttttgggtaggatgctgcgtgcggataTtttcttctgaatttggtgccgcggcatgtgggccacatggggttgcgccgttgccacatgtaggactatatatgctgtttacctaacacaacaagtaagcatgtggtgaaagtttccattgaaatggctatatgacagtttctaaaacaaatttatgtcagcaaatgtttagtaccacctactactagatttcagttttgcacgtatagtcgtatagatctgtctgcctttgccttggtacacctttcaaacagttttgccaaacaATtaaaaaactaaaagctaAGaaaccttctaaagaccaagagcTtttttttagaaagaggaaccaaTtttgcctccaaaaatttcatttgtgaaggcAagtatAaggtggcaaaaaatgcatatatgggatcgttcacatggcgcaaatcaacgcgaatggttctcttaatttcctctctaatgctatatgcgatgatgcattttctatttcccatattgatgtgtgtcggtgaagtgggaaccaggttcccACTACCGGTTGCGGCTCGGTGCACCTAACGACATGTTATCTGGTGGGATGATCCATGTCGCTATTAATCAGCTCGGGTCTATTTCAATGGCCGTGGGATAGGACATGGTCTTGGGGCCTGCCATGGAGATATTCATATGACAACAGGTTAGTATTGGCCGAGCTCGGGGCAGGAGCTCGGGCACAGCTGCCACTTGCCCCCGGGCTTGTCTCTTGTAGGCTACTCGGGCCAACAACAGCGCATTAACTGTGACAGGTTGCATCTTGCTGATTGCTGCCATCGAAAAAGTGTACCGAAGGTAATAGATAGCGTATAGCGGGTCGGTACCGGATTGGTGCGTATGTAGCGGATCGCGGATAGCAGACGCTAAGTTTCAATAGCGGCATTTAATCATCGCACATATTTGAATGTATAtatataatgaatagtgactttataaaaattaacaaatcaactgagaaacaaattagtgatagattaatacatgtataacctatgaggataagtagagatttagtagcacttgaagagttgatgttgtgttccaactcgttagatgttacgactcacaagaatacaatgttttgggagacaaaaCaattaataaactcgttacttgttatGggttagtggtcatatAaaataGgctcacactacagcagtccacaaaatcgaattgcagccgctgtagcagtccgctaagtgaaaatagtgggtgctaagttccaagatgctatatctagtatacgtcgtaccGgtagtggtagggtccgctaccgctatagtggcagctAaaaacgctatttattatcttgagtgtaccTtacattaaaagcaatatgACatatatctacccgacgtgtaactgaggccacgggacgacgcttgaatggccgccatgctttcatcatccctacgggggagggtgtGggctgtcagatggtatggtggaccatcgtgctgccttgcttggcccatagcctctcTacatgttctaccacctagggctgatagcctgataggcagacgccataggcttcagcaactccccaagcttttactgcaacccttgcatgcgcagataggatgcacggttggagaagaaggcctccttcccatttggccctagggaggcacaccaggatcagacgactgggtccatgcatcagcaagtgacaacatatctcataactAacccctgtgtattgatgcccatttgtaagagtctggccattgtggtattcccccatcaactataagaggagAtttaaggccatcgagaaaaaggatcgaccccaaaaactagttcatgaaaaatccacactcttgtagcagatccattcaaccataaTacagaacaaaacatcacaagagtagggtataatcaccattgtctcatttaccatcgtagcaaactcttggtcttgcactcccgtcccctgggccaaactcacaaagaagggtccattgattcccggtacaggagcccattcttcgacagcatgttttccctttctagctattatcgtcttcctttccatacctagcactaaccagcatgaactcagaagtgatctgatatcagaaatccagataatttcaacttactcattcactttcaaatcaattttctgaaattttcaactcatcaccttagtctttcttccgaagaccttatatatgtttgatatcataaactttcatatgaaaacaaactcaaaaaattcatactcaaaacattgaatgttgtatatgctctcatacaaaaagaggtgtaacacattgctgtcaacaagatttttatttcaaggaaactcTtggtttatattttaatagtaatatacactaaaattataaataatactccacgacgcttttcatgtccaatgtttacattagAaaagcAagggttgcAaaagaataaccaaattattagcatcgtgtataactaaagagggtaaggccactagcgcacctaattaactagtttaatccaaagagaaagaagctaggaatatttctggaatattatcatgttAaaagtaatccttaaaatctgaaaaattggtgaggttgccaaccaacaaagtccataaacgcgagactatagaccaggatcggttcatgtgaatttgaggaacttctaaggattttagacattatttggaagctaatagaagcctaagcaataaattcaactcaacataagatatccatcttttgttgtAgtataatttAtgtatactaaattattttttacttagaaaattcacataaaccttgagcttaaagattttagatattactttactagttaaccaatccaatacgagagtggatgctAaaacaatccaatataagtgtccattctttgacttccctagatcttccactagtacaacttcccataaagttatggaggcaaggagttatagaaGTtttcatatatgattaagtatgcttggttattaaaactagaccagtgctcaaaccagtggctccaatggttcaacatgttgactagtttagccactggtcaactatcaaccgccaatttaaaaataatAataatgcaaatttcttgaatgtttggttacAaaaagcataagtaaatttattcagtgctttagataggAaaattgttgggataataaacaCccataaagcttgtactttgatacccctataactagtaaaaattattGggatcctacaaccatcaagtttgaagtggataattcactgaatataaggttttgagcacaaagaaatttgtagagccttcaagtattccccggctttaggtgagacaTtgaccatccgtagTtttaggtggttccgtgaatactattcgaccggtttctaatggtttgtatcattgtatgtatgaatcttcccacctggttatgccatccagatcttcattattcaattattcatctatttactaaagacaagAaaacatataaataattgtctttccatatctgtcttggggcctgtctAgggggagcTtttggcagctgcagcttcttccagaatcaGaagctcccctaaacggtcctgtttttcatctagattctgagaaactgtagttgtagaatcAagaaaataaactagaagccagaagttggaaaagcttttccagattctcagaagTtggctatcaaccagctgcttctcagaatcaggatgttttctccacatagatagcagtagcagagataccttttccccttccaatcaggatGttttctccacaattactagccAatatttatctcatatgttttccacatttatagttagatattattcctagaccgacagccataccaGtccatcctaaatttgctacatgctaggagtttcgtctttttgggggAaaaccaaactgtttgagttAAaaattgaaatatcccaggcacaattcaaaagctaaaatgtattccttttacttatcagtaatacttgtttatttatgcaggagggtgactaagttggatgttgttggtccAataccttcagagctgcagaatctcacctatctagaggacctgtatgatacctaaatcttgtcatcttaatcattatagtgaagtgttagctgtatatcaatgtttcgcagaatatatcatttcagtcacatgttttgaatgctcaactgcctatttccttgtgaaaaccagcgaatagtagtcagttgtgcaacattcttgttctggctaattgacctgatgtttctggtgttgtttcaggaacctgggttataattacttgactggtgccatgccatcattcatgggaaaattcacttccatgaaatatttGtaggagttatatattAatttatatattcaagtgccatccattggtgttttgtcttgactacttttcatcattcaaagggccttgcctttcaatccactgtctggaccacttccgaaggaacttggcaacctgaccaatcttttgtcactgtaagaaattgtatcaatcttcaactatatattaggaacagcctgaactattatattacatgacttctcataaaaaagttagaaagaactaataactcttcaatagtaggcatctcagtgtgacttcccttttcctgtggtgtttcatatgttggaataaaattgagctaaaaaaggcttgagaaaattctgatgatgaatattgcatctcaaatcaagaaaaactattcctctgatattttgttgaagggaataatttataactctagtgatttttttttattcaggggcatcagctattgtaatttttctggggaacttcCTGatgaacttggcaatatgactagtcttaagcaattgtaagatccagcgtttctgatttcccaatgctacttcttaaaagaactattattgaatatgataatttctgcaatggttcaataacaggtacattgatggttccggattcagcggtccattcccttcgacattctctaaacttaagaacctaaacatcttgtacagtcaatcgagagcctgacctggtatatatgtccattatttttttatgtgctaaatatcaaaatactttggtgtgcctgcaggagggcatcagacaatgaattcacagggaaaataccagattattttgggcgcatgactaatttggtggatgtgtaagattaattatattaacctgttgacactacacttggtatatcttgagacagatggaaattacgttcttccatttgaacctggcaatagcatttttcatattttagtcctcacttaacagaaatgcatgcatctttcacattttccggcatggcttacctttttcttatactaaaatggacctGcaatgtccctacattttctctgaaagtataaacttgtagggctttccAaggaaattcttttgaaggaccaattcccgcaggtttctctaatctgacgaaattaacaaacttgtaagtaGatttGtttttttggcatctttggtcctttgatggctgagaagttcaagattgataactggtttgtgaaatacaattgagcagacggattggtgatattgtaaatggaagctcttcattgggatttatcagtaAtatgacatctctgagcaacctgtatgtgatgccttttgctatagagcattagaccttacaatattgtcaaagttgcaagtaacctagattgttgttacagattgttgttagcagaatattaacaagattatccgtgcaaattcatctgaatgcaatcaatcttgaagcagaagcaatcagacattctaagtttgcaacattaaccttactgtaagttttcattacttgccatggtgccagttataatgcttttggtcattgactGgaattgcgaagcatctgttcAagtacctttttctcctgtggcacaGggacttgagttttaacagtatcacaGgacaagttcctcagtccatcctgaatctgggaatgcttgaattcctgtaagAaattcTtttttacattAattcaatttatacaagcacctgttaagatgatgtccatgtttcctgaatctgggaattcttgaattccagtaagagtgttcTttctttacagcaatcccatttatagaacacttgttaggtgatGtgcatgtttcattatcttgtatattcaggtttcttgggaacaatagccttacaggaaatttgccagatgttataagcccctcattgaaaacaatgtaagttagaaacaaccaccatagaagtatagcatatttttttaataatgcaatggtgtattcatttcatatgtAataactctagtctgtttgcagagatttttcctataatcagctcactggaagctttccttcttgggatagtcagaacaatttgcaattgtaagtgtaaaattctgaaatcgtcttaccaaggaaaaaaagaggtattctaacattttctcttgtgcaaggaatttGgtggcgaacaactttgTtcttgataggactaccaacAGgtacttatggcaTtttgttaaacttttgcaagagattagttGtaacAaactctttctcacgacgtgcacagtcatgtaccttctggattaaactgcctacagcaagacaccccttgttttcgtggatctccagaatgtatagcttttactcttcactaaccgcagcattcaataggacatcagaaatttcaatagtgctcattgttattgcatcgcttaattgtagattattcctttgctgttgactgtggaagtaatagctcgacgagaggctcagataatactatttacgaagcagatcctatgAaccttggggctggatcatattttgttactggtgaaaaaagatggggtatcagtaatgtAGgAaaatttgaccaggccacaaatggaattgacataatatAtagctccgaccattttcagaatacagttgattcaaaattaTtcgaaactgcaagaatgtcagcatcatcgctgagatactatggtcttggacttgagaatggaaattataccgttctgcttcaatttgcagaattcgcatttccagattctcaaggttggcaaagcttaGgaaagaggattttcgacatatatgtccaGgtaaaaatggattgcatttaaattaaTttgtttactgatttactgaatctttatattctttgtctaaaagaattattggcatttgcataGggtgctctaaaagaaaaggatttcaatataaagaagacggcaggtggaaaatcttttaccgtagttaataggaattacacggcaactgtAtcaaaaaacttccttgaaattcatctcttttgggccggcaagggcacttgttgcgtacctactcaaggttactatggcccAatgatatcagcattaagcgtcactcctagtaagaacgattattaagtaatttcTtgaactttcattggcttccaataagtaaaacaattattttcagattttacTcctactgtgcgaaatggtatacccaaaaGgggaaatAGaacaggtgtaattgccggagtactgattggttcattagttcttggattagcaaccttctttggaatatttattgtggtaaagaagcgAagagcaatggcacagcagaaagaaggtatcattttattagtcagtatttcagacagtaaaTttatGaaatgatttattctttctcgtctgtctggaaaaattgcagaattgtacaacctggttggacggcctgatgtttttagtaacgttgaactcaagctagctactgacaatttcagttccAaaaacattcttggggaaggtggatatgggccagtgtacAaggttGtgtctgattcctgcaattaatcttgtgaaactgcaactgactatttatctgatttgatatttaagtgtagcatttgggcaacgttttggccacgctcaaaatatacatgtaactttttaggaGTgTttgcctatggcagggtaagctacctgatgggagagtaatagctgtgaaacaactttctcaatcatctcatcaggggaaaagtcaatttatAaccgaggttacaacaatttcttctgtgcaacacaagaatcttgtgaaattgcatggcttctgcattgacAacaatgcacccttgctagtttatgagtaccttgaaaatggaagcctagatcaagcactcttcagtaagtacacttctgcaaattgctagcacaagtaaaatcgtGtttccttgtatgtactaataaaattaaaatcgtgtttccttgaatgtactaataaaataattatctgcattttgtcatcatttttattcttgaggctttatcgagaTttttttaatgtacaGgagacaacaacttaaacctagactgggcaatgcgctttgagattaTtttaggcattgcaaggggcataacTtatcttcacgaggagtcgaatgtgcgcatcgtgcatagggacataaaagccagcaatgtcctacttgatacggatctcaccccaaaaatctctgaTtttggactcgctaaactctatgatgagaagcagactcatgtgagcacaagaattgcaggcacattgtaagtacaatttaccattttctcTtcttatggatggaatctcaaaattaaagctgctcttaaacttgtttgacctttttcaagtggctatctagctccggagtatgcaatgagaggtcgtttgacagaaaaggtagatatttttgcattcggggtggtcatgttggagactgttgctggtcgatcgaataccAacaactccctcatggAaagtgagatatatctctttgagtgggtaagatgataaaaactctttccatccacaccagtacactagtgtgcattatcttctgcttactgaacctatgTtcatttataggcctgggacctgtatgAAaaagagcaacctctcggaatcgttgacccaagtcttatggaatatgataaggatgaagctctcagagtcatacgggttgcactcctctgcacacagggctcgccgcaccagcgaccaccaatgtcgaaggtcgtggcAatgctcaccGgagaagttgaagtagctgaggttgtcacgaagccgagttacatcacggagtggcagctaaGggatGggaatagaagctatgtcaccaccagctactcaggatctactacccatgagttcaacagtaaGgacgagattaagcctttcacctagtcgccaatgatcacaggacctagtcttgcggAaaggggaaagtaaagttgaattactctaggtgaagtgataatattggacactgtctcgttaatacaatac
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| CDS seq | atgcGgcctagcatggccggtgtcTtcacccatctcgcgtggccgctgcttgtgcttGTGCTGTGCTCATGGCGgattatcgcagctgctcaggctcagccgcgaactgatccaGtcgaagcggcggcgttgaacacgatcctggggaGatggggcaagacggcgtcgccggagtggaacatcagcggcgagctctgcagcggcgtcgcctccgacctgtccaactgggacgactACCcAaatctCAacccgttcatcAagtgcgactgcaagtacaacAacgggaccctctgccacatcaacaaactgagggtgactaagttggatgttgttggtccAataccttcagagctgcagaatctcacctatctagaggacctgaacctgggttataattacttgactggtgccatgccatcattcatgggaaaattcacttccatgaaatatttggccttgcctttcaatccactgtctggaccacttccgaaggaacttggcaacctgaccaatcttttgtcactgggcatcagctattgtaatttttctggggaacttcCTGatgaacttggcaatatgactagtcttaagcaattgtacattgatggttccggattcagcggtccattcccttcgacattctctaaacttaagaacctaaacatcttgagggcatcagacaatgaattcacagggaaaataccagattattttgggcgcatgactaatttggtggatgtggctttccAaggaaattcttttgaaggaccaattcccgcaggtttctctaatctgacgaaattaacaaacttacggattggtgatattgtaaatggaagctcttcattgggatttatcagtaAtatgacatctctgagcaacctaatattaacaagattatccgtgcaaattcatctgaatgcaatcaatcttgaagcagaagcaatcagacattctaagtttgcaacattaaccttactggacttgagttttaacagtatcacaGgacaagttcctcagtccatcctgaatctgggaatgcttgaattcctgtttcttgggaacaatagccttacaggaaatttgccagatgttataagcccctcattgaaaacaatagatttttcctataatcagctcactggaagctttccttcttgggatagtcagaacaatttgcaattgaatttGgtggcgaacaactttgTtcttgataggactaccaacAGtcatgtaccttctggattaaactgcctacagcaagacaccccttgttttcgtggatctccagaatattattcctttgctgttgactgtggaagtaatagctcgacgagaggctcagataatactatttacgaagcagatcctatgAaccttggggctggatcatattttgttactggtgaaaaaagatggggtatcagtaatgtAGgAaaatttgaccaggccacaaatggaattgacataatatAtagctccgaccattttcagaatacagttgattcaaaattaTtcgaaactgcaagaatgtcagcatcatcgctgagatactatggtcttggacttgagaatggaaattataccgttctgcttcaatttgcagaattcgcatttccagattctcaaggttggcaaagcttaGgaaagaggattttcgacatatatgtccaGggtgctctaaaagaaaaggatttcaatataaagaagacggcaggtggaaaatcttttaccgtagttaataggaattacacggcaactgtAtcaaaaaacttccttgaaattcatctcttttgggccggcaagggcacttgttgcgtacctactcaaggttactatggcccAatgatatcagcattaagcgtcactcctaattttacTcctactgtgcgaaatggtatacccaaaaGgggaaatAGaacaggtgtaattgccggagtactgattggttcattagttcttggattagcaaccttctttggaatatttattgtggtaaagaagcgAagagcaatggcacagcagaaagaagaattgtacaacctggttggacggcctgatgtttttagtaacgttgaactcaagctagctactgacaatttcagttccAaaaacattcttggggaaggtggatatgggccagtgtacAagggtaagctacctgatgggagagtaatagctgtgaaacaactttctcaatcatctcatcaggggaaaagtcaatttatAaccgaggttacaacaatttcttctgtgcaacacaagaatcttgtgaaattgcatggcttctgcattgacAacaatgcacccttgctagtttatgagtaccttgaaaatggaagcctagatcaagcactcttcagagacaacaacttaaacctagactgggcaatgcgctttgagattaTtttaggcattgcaaggggcataacTtatcttcacgaggagtcgaatgtgcgcatcgtgcatagggacataaaagccagcaatgtcctacttgatacggatctcaccccaaaaatctctgaTtttggactcgctaaactctatgatgagaagcagactcatgtgagcacaagaattgcaggcacatttggctatctagctccggagtatgcaatgagaggtcgtttgacagaaaaggtagatatttttgcattcggggtggtcatgttggagactgttgctggtcgatcgaataccAacaactccctcatggAaagtgagatatatctctttgagtgggcctgggacctgtatgAAaaagagcaacctctcggaatcgttgacccaagtcttatggaatatgataaggatgaagctctcagagtcatacgggttgcactcctctgcacacagggctcgccgcaccagcgaccaccaatgtcgaaggtcgtggcAatgctcaccGgagaagttgaagtagctgaggttgtcacgaagccgagttacatcacggagtggcagctaaGggatGggaatagaagctatgtcaccaccagctactcaggatctactacccatgagttcaacagtaaGgacgagattaagcctttcacctag
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| Protein seq | MRPSMAGVFTHLAWPLLVLVLCSWRIIAAAQAQPRTDPVEAAALNTILGRWGKTASPEWNISGELCSGVASDLSNWDDYPNLNPFIKCDCKYNNGTLCHINKLRVTKLDVVGPIPSELQNLTYLEDLNLGYNYLTGAMPSFMGKFTSMKYLALPFNPLSGPLPKELGNLTNLLSLGISYCNFSGELPDELGNMTSLKQLYIDGSGFSGPFPSTFSKLKNLNILRASDNEFTGKIPDYFGRMTNLVDVAFQGNSFEGPIPAGFSNLTKLTNLRIGDIVNGSSSLGFISNMTSLSNLILTRLSVQIHLNAINLEAEAIRHSKFATLTLLDLSFNSITGQVPQSILNLGMLEFLFLGNNSLTGNLPDVISPSLKTIDFSYNQLTGSFPSWDSQNNLQLNLVANNFVLDRTTNSHVPSGLNCLQQDTPCFRGSPEYYSFAVDCGSNSSTRGSDNTIYEADPMNLGAGSYFVTGEKRWGISNVGKFDQATNGIDIIYSSDHFQNTVDSKLFETARMSASSLRYYGLGLENGNYTVLLQFAEFAFPDSQGWQSLGKRIFDIYVQGALKEKDFNIKKTAGGKSFTVVNRNYTATVSKNFLEIHLFWAGKGTCCVPTQGYYGPMISALSVTPNFTPTVRNGIPKRGNRTGVIAGVLIGSLVLGLATFFGIFIVVKKRRAMAQQKEELYNLVGRPDVFSNVELKLATDNFSSKNILGEGGYGPVYKGKLPDGRVIAVKQLSQSSHQGKSQFITEVTTISSVQHKNLVKLHGFCIDNNAPLLVYEYLENGSLDQALFRDNNLNLDWAMRFEIILGIARGITYLHEESNVRIVHRDIKASNVLLDTDLTPKISDFGLAKLYDEKQTHVSTRIAGTFGYLAPEYAMRGRLTEKVDIFAFGVVMLETVAGRSNTNNSLMESEIYLFEWAWDLYEKEQPLGIVDPSLMEYDKDEALRVIRVALLCTQGSPHQRPPMSKVVAMLTGEVEVAEVVTKPSYITEWQLRDGNRSYVTTSYSGSTTHEFNSKDEIKPFT |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [UniProtKB/Swiss-Prot:C0LGH2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_05g0009280 | OsLaMu_05g0009280.02 | Chr05 | 9331355 | 9341533 | + | NAM | ||
| CDS seq | atgcGgcctagcatggccggtgtcTtcacccatctcgcgtggccgctgcttgtgcttGTGCTGTGCTCATGGCGgattatcgcagctgctcaggctcagccgcgaactgatccaGtcgaagcggcggcgttgaacacgatcctggggaGatggggcaagacggcgtcgccggagtggaacatcagcggcgagctctgcagcggcgtcgcctccgacctgtccaactgggacgactACCcAaatctCAacccgttcatcAagtgcgactgcaagtacaacAacgggaccctctgccacatcaacaaactgagggtgactaagttggatgttgttggtccAataccttcagagctgcagaatctcacctatctagaggacctgaacctgggttataattacttgactggtgccatgccatcattcatgggaaaattcacttccatgaaatatttggccttgcctttcaatccactgtctggaccacttccgaaggaacttggcaacctgaccaatcttttgtcactgggcatcagctattgtaatttttctggggaacttcCTGatgaacttggcaatatgactagtcttaagcaattgtacattgatggttccggattcagcggtccattcccttcgacattctctaaacttaagaacctaaacatcttgagggcatcagacaatgaattcacagggaaaataccagattattttgggcgcatgactaatttggtggatgtggctttccAaggaaattcttttgaaggaccaattcccgcaggtttctctaatctgacgaaattaacaaacttacggattggtgatattgtaaatggaagctcttcattgggatttatcagtaAtatgacatctctgagcaacctaatattaacaagattatccgtgcaaattcatctgaatgcaatcaatcttgaagcagaagcaatcagacattctaagtttgcaacattaaccttactggacttgagttttaacagtatcacaGgacaagttcctcagtccatcctgaatctgggaatgcttgaattcctgtttcttgggaacaatagccttacaggaaatttgccagatgttataagcccctcattgaaaacaatagatttttcctataatcagctcactggaagctttccttcttgggatagtcagaacaatttgcaattgaatttGgtggcgaacaactttgTtcttgataggactaccaacAGtcatgtaccttctggattaaactgcctacagcaagacaccccttgttttcgtggatctccagaatattattcctttgctgttgactgtggaagtaatagctcgacgagaggctcagataatactatttacgaagcagatcctatgAaccttggggctggatcatattttgttactggtgaaaaaagatggggtatcagtaatgtAGgAaaatttgaccaggccacaaatggaattgacataatatAtagctccgaccattttcagaatacagttgattcaaaattaTtcgaaactgcaagaatgtcagcatcatcgctgagatactatggtcttggacttgagaatggaaattataccgttctgcttcaatttgcagaattcgcatttccagattctcaaggttggcaaagcttaGgaaagaggattttcgacatatatgtccaGggtgctctaaaagaaaaggatttcaatataaagaagacggcaggtggaaaatcttttaccgtagttaataggaattacacggcaactgtAtcaaaaaacttccttgaaattcatctcttttgggccggcaagggcacttgttgcgtacctactcaaggttactatggcccAatgatatcagcattaagcgtcactcctaattttacTcctactgtgcgaaatggtatacccaaaaGgggaaatAGaacaggtgtaattgccggagtactgattggttcattagttcttggattagcaaccttctttggaatatttattgtggtaaagaagcgAagagcaatggcacagcagaaagaagaattgtacaacctggttggacggcctgatgtttttagtaacgttgaactcaagctagctactgacaatttcagttccAaaaacattcttggggaaggtggatatgggccagtgtacAagggtaagctacctgatgggagagtaatagctgtgaaacaactttctcaatcatctcatcaggggaaaagtcaatttatAaccgaggttacaacaatttcttctgtgcaacacaagaatcttgtgaaattgcatggcttctgcattgacAacaatgcacccttgctagtttatgagtaccttgaaaatggaagcctagatcaagcactcttcagagacaacaacttaaacctagactgggcaatgcgctttgagattaTtttaggcattgcaaggggcataacTtatcttcacgaggagtcgaatgtgcgcatcgtgcatagggacataaaagccagcaatgtcctacttgatacggatctcaccccaaaaatctctgaTtttggactcgctaaactctatgatgagaagcagactcatgtgagcacaagaattgcaggcacatttggctatctagctccggagtatgcaatgagaggtcgtttgacagaaaaggtagatatttttgcattcggggtggtcatgttggagactgttgctggtcgatcgaataccAacaactccctcatggAaagtgagatatatctctttgagtgggcctgggacctgtatgAAaaagagcaacctctcggaatcgttgacccaagtcttatggaatatgataaggatgaagctctcagagtcatacgggttgcactcctctgcacacagggctcgccgcaccagcgaccaccaatgtcgaaggtcgtggcAatgctcaccGgagaagttgaagtagctgaggttgtcacgaagccgagttacatcacggagtggcagctaaGggatGggaatagaagctatgtcaccaccagctactcaggatctactacccatgagttcaacagtaaGgacgagattaagcctttcacctag
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| Protein seq | MRPSMAGVFTHLAWPLLVLVLCSWRIIAAAQAQPRTDPVEAAALNTILGRWGKTASPEWNISGELCSGVASDLSNWDDYPNLNPFIKCDCKYNNGTLCHINKLRVTKLDVVGPIPSELQNLTYLEDLNLGYNYLTGAMPSFMGKFTSMKYLALPFNPLSGPLPKELGNLTNLLSLGISYCNFSGELPDELGNMTSLKQLYIDGSGFSGPFPSTFSKLKNLNILRASDNEFTGKIPDYFGRMTNLVDVAFQGNSFEGPIPAGFSNLTKLTNLRIGDIVNGSSSLGFISNMTSLSNLILTRLSVQIHLNAINLEAEAIRHSKFATLTLLDLSFNSITGQVPQSILNLGMLEFLFLGNNSLTGNLPDVISPSLKTIDFSYNQLTGSFPSWDSQNNLQLNLVANNFVLDRTTNSHVPSGLNCLQQDTPCFRGSPEYYSFAVDCGSNSSTRGSDNTIYEADPMNLGAGSYFVTGEKRWGISNVGKFDQATNGIDIIYSSDHFQNTVDSKLFETARMSASSLRYYGLGLENGNYTVLLQFAEFAFPDSQGWQSLGKRIFDIYVQGALKEKDFNIKKTAGGKSFTVVNRNYTATVSKNFLEIHLFWAGKGTCCVPTQGYYGPMISALSVTPNFTPTVRNGIPKRGNRTGVIAGVLIGSLVLGLATFFGIFIVVKKRRAMAQQKEELYNLVGRPDVFSNVELKLATDNFSSKNILGEGGYGPVYKGKLPDGRVIAVKQLSQSSHQGKSQFITEVTTISSVQHKNLVKLHGFCIDNNAPLLVYEYLENGSLDQALFRDNNLNLDWAMRFEIILGIARGITYLHEESNVRIVHRDIKASNVLLDTDLTPKISDFGLAKLYDEKQTHVSTRIAGTFGYLAPEYAMRGRLTEKVDIFAFGVVMLETVAGRSNTNNSLMESEIYLFEWAWDLYEKEQPLGIVDPSLMEYDKDEALRVIRVALLCTQGSPHQRPPMSKVVAMLTGEVEVAEVVTKPSYITEWQLRDGNRSYVTTSYSGSTTHEFNSKDEIKPFT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_05g0009280 | OsLaMu_05g0009280.01 | Chr05 | 9331355 | 9341533 | + | NAM | ||
| CDS seq | atgcGgcctagcatggccggtgtcTtcacccatctcgcgtggccgctgcttgtgcttGTGCTGTGCTCATGGCGgattatcgcagctgctcaggctcagccgcgaactgatccaGtcgaagcggcggcgttgaacacgatcctggggaGatggggcaagacggcgtcgccggagtggaacatcagcggcgagctctgcagcggcgtcgcctccgacctgtccaactgggacgactACCcAaatctCAacccgttcatcAagtgcgactgcaagtacaacAacgggaccctctgccacatcaacaaactgagggtgactaagttggatgttgttggtccAataccttcagagctgcagaatctcacctatctagaggacctgaacctgggttataattacttgactggtgccatgccatcattcatgggaaaattcacttccatgaaatatttggccttgcctttcaatccactgtctggaccacttccgaaggaacttggcaacctgaccaatcttttgtcactgggcatcagctattgtaatttttctggggaacttcCTGatgaacttggcaatatgactagtcttaagcaattgtacattgatggttccggattcagcggtccattcccttcgacattctctaaacttaagaacctaaacatcttgagggcatcagacaatgaattcacagggaaaataccagattattttgggcgcatgactaatttggtggatgtggctttccAaggaaattcttttgaaggaccaattcccgcaggtttctctaatctgacgaaattaacaaacttacggattggtgatattgtaaatggaagctcttcattgggatttatcagtaAtatgacatctctgagcaacctaatattaacaagattatccgtgcaaattcatctgaatgcaatcaatcttgaagcagaagcaatcagacattctaagtttgcaacattaaccttactggacttgagttttaacagtatcacaGgacaagttcctcagtccatcctgaatctgggaatgcttgaattcctgtttcttgggaacaatagccttacaggaaatttgccagatgttataagcccctcattgaaaacaattctgtttgcagagatttttcctataatcagctcactggaagctttccttcttgggatagtcagaacaatttgcaattattattcctttgctgttgactgtggaagtaatagctcgacgagaggctcagataatactatttacgaagcagatcctatgAaccttggggctggatcatattttgttactggtgaaaaaagatggggtatcagtaatgtAGgAaaatttgaccaggccacaaatggaattgacataatatAtagctccgaccattttcagaatacagttgattcaaaattaTtcgaaactgcaagaatgtcagcatcatcgctgagatactatggtcttggacttgagaatggaaattataccgttctgcttcaatttgcagaattcgcatttccagattctcaaggttggcaaagcttaGgaaagaggattttcgacatatatgtccaGggtgctctaaaagaaaaggatttcaatataaagaagacggcaggtggaaaatcttttaccgtagttaataggaattacacggcaactgtAtcaaaaaacttccttgaaattcatctcttttgggccggcaagggcacttgttgcgtacctactcaaggttactatggcccAatgatatcagcattaagcgtcactcctaattttacTcctactgtgcgaaatggtatacccaaaaGgggaaatAGaacaggtgtaattgccggagtactgattggttcattagttcttggattagcaaccttctttggaatatttattgtggtaaagaagcgAagagcaatggcacagcagaaagaagaattgtacaacctggttggacggcctgatgtttttagtaacgttgaactcaagctagctactgacaatttcagttccAaaaacattcttggggaaggtggatatgggccagtgtacAagggtaagctacctgatgggagagtaatagctgtgaaacaactttctcaatcatctcatcaggggaaaagtcaatttatAaccgaggttacaacaatttcttctgtgcaacacaagaatcttgtgaaattgcatggcttctgcattgacAacaatgcacccttgctagtttatgagtaccttgaaaatggaagcctagatcaagcactcttcagagacaacaacttaaacctagactgggcaatgcgctttgagattaTtttaggcattgcaaggggcataacTtatcttcacgaggagtcgaatgtgcgcatcgtgcatagggacataaaagccagcaatgtcctacttgatacggatctcaccccaaaaatctctgaTtttggactcgctaaactctatgatgagaagcagactcatgtgagcacaagaattgcaggcacatttggctatctagctccggagtatgcaatgagaggtcgtttgacagaaaaggtagatatttttgcattcggggtggtcatgttggagactgttgctggtcgatcgaataccAacaactccctcatggAaagtgagatatatctctttgagtgggcctgggacctgtatgAAaaagagcaacctctcggaatcgttgacccaagtcttatggaatatgataaggatgaagctctcagagtcatacgggttgcactcctctgcacacagggctcgccgcaccagcgaccaccaatgtcgaaggtcgtggcAatgctcaccGgagaagttgaagtagctgaggttgtcacgaagccgagttacatcacggagtggcagctaaGggatGggaatagaagctatgtcaccaccagctactcaggatctactacccatgagttcaacagtaaGgacgagattaagcctttcacctag
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| Protein seq | MRPSMAGVFTHLAWPLLVLVLCSWRIIAAAQAQPRTDPVEAAALNTILGRWGKTASPEWNISGELCSGVASDLSNWDDYPNLNPFIKCDCKYNNGTLCHINKLRVTKLDVVGPIPSELQNLTYLEDLNLGYNYLTGAMPSFMGKFTSMKYLALPFNPLSGPLPKELGNLTNLLSLGISYCNFSGELPDELGNMTSLKQLYIDGSGFSGPFPSTFSKLKNLNILRASDNEFTGKIPDYFGRMTNLVDVAFQGNSFEGPIPAGFSNLTKLTNLRIGDIVNGSSSLGFISNMTSLSNLILTRLSVQIHLNAINLEAEAIRHSKFATLTLLDLSFNSITGQVPQSILNLGMLEFLFLGNNSLTGNLPDVISPSLKTILFAEIFPIISSLEAFLLGIVRTICNYYSFAVDCGSNSSTRGSDNTIYEADPMNLGAGSYFVTGEKRWGISNVGKFDQATNGIDIIYSSDHFQNTVDSKLFETARMSASSLRYYGLGLENGNYTVLLQFAEFAFPDSQGWQSLGKRIFDIYVQGALKEKDFNIKKTAGGKSFTVVNRNYTATVSKNFLEIHLFWAGKGTCCVPTQGYYGPMISALSVTPNFTPTVRNGIPKRGNRTGVIAGVLIGSLVLGLATFFGIFIVVKKRRAMAQQKEELYNLVGRPDVFSNVELKLATDNFSSKNILGEGGYGPVYKGKLPDGRVIAVKQLSQSSHQGKSQFITEVTTISSVQHKNLVKLHGFCIDNNAPLLVYEYLENGSLDQALFRDNNLNLDWAMRFEIILGIARGITYLHEESNVRIVHRDIKASNVLLDTDLTPKISDFGLAKLYDEKQTHVSTRIAGTFGYLAPEYAMRGRLTEKVDIFAFGVVMLETVAGRSNTNNSLMESEIYLFEWAWDLYEKEQPLGIVDPSLMEYDKDEALRVIRVALLCTQGSPHQRPPMSKVVAMLTGEVEVAEVVTKPSYITEWQLRDGNRSYVTTSYSGSTTHEFNSKDEIKPFT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr05 | 9338443 | 9338540 | + | OsLaMu_05g0009280.01 | OsLaMu_05g0009280.01,OsLaMu_05g0009280.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.086092 | 24.981190 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0256500 | RBH | 0.844230 | 0.948621 | 1.147196 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g16740 | RBH | 0.654236 | 0.810010 | 0.413951 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0256500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0009290 | RBH | 0.124654 | 26.550545 | 1.317929 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0009330 | RBH | 0.040886 | 11.672658 | 2.362268 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0009220 | RBH | 0.775595 | 37.370052 | 2.390502 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0009320 | RBH | 0.000000 | 2.114618 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0009360 | RBH | 3.692716 | 67.319969 | 5.551228 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0142600 | RBH | 1.7083545 | 22.403785 | 0.557805 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0009230 | RBH | 0.144259 | 3.050867 | 0.205589 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0143500 | RBH | 2.045069 | 23.487054 | 4.33683 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0009220 | RBH | 0.026519 | 0.957365 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0009170 | RBH | 0.036185 | 38.109097 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0009270 | RBH | 0.0 | 34.350403 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0009320 | RBH | 0.236604 | 3.159368 | 0.417906 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G009090 | RBH | 0.119500 | 17.227184 | 1.284277 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0009380 | RBH | 0.353881 | 43.422394 | 1.443372 |
