Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_04g0025480 | OGI:04089640 | 11/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr04:31383408-31386321 | ||||||||
| Gene Symbol | WAK53, OsWAK53, OsWAK53a | ||||||||||
| DNA seq | acattgggaaactaacctatcatttctttataaagtttggtacattccaaatgaattactttaaccaccatgttaagaccaaattgacttctgaaaggatcagatatttctttctgagaaatagttgaacagacattggagttcgacaacactctccaattattcctagtatacccgtctctgggtttctacatgattggcagctcagagcaacacagaaaatcattgtcatgaaactggggactgagttataataactaagggaaaaccatttgtgctgggaggactaacatgagagggccctgaatgggagtagaatggtgtccatgctttcctcctccttggtaatgttatcaaggctcaaactcggaggatgcttcgatgtttacatctgcatgctgacctgattcgcagagcagagggtcttcttcggtctgcaggaccaagtgttgtttcatcagccttctcagagcttcaagttcaattgccacctctatcatccttggcctctcttcacctctcgaccttaagcatcgtaaagccaattgtgcaacggttttaacatgtttcgtgccagcttcctcagctacttgagaatctacaatttccaacaactggatctgatagaataacatactaaaatgacatgctagatttctcacatcatctgtcctaccatcagatataggtttctgtcttgtcaatagctcgataagaaccaccccaaaactgtatacatcactcttctcagttagctggcttgtttggaaatattcagggtccatgtaccccaatgtcccctgcactaaagttgtcacatgggtctggttgtgtggtattggcctcgaggcaccaaaatcagacacctttgcagtgaagttctcgtcaaggagtatgtttgatgacttgacatccctgtgaataattggttcctttgtagctaagtgtaagtatgcaagtgctgatgcagtttcaactgcaatccttaggcggtcctcccatgaaatcaggacagatgtattttgaagatgagaaaaaagggccccattggtgatgaattcataaactaacaagggaagttctgtctcaagacaacagcctaatagctggaccacattcttgtggttcacttgtgaaagaatgaccaactcgtttatgaattgttccatttggttctgatcaactcgctgcgccttcttgattgccacaaccatttgattggataatatacctttgtacacgatcccaaatccacctcgaccaatgatattgtcatcactgaagctgttggttgctttctcaagttcactagaagtaaatatccgcagtggtgcaccttgagaaaacatcttctgcttcagcaacattccaccattctgcataaagtatctctgtcttatcttcgcaagttttctcttcttaacaagccaatgggtccagaatatgagaacaaggagaagcagtagcagagctagtccagtaactgcacagacacagaaaattcagggatctctattggatgcagcattaatcaactcaagccttcaaattgaatgattacatcattcacatggcaaggcagtgatacagggcttcagaaacttgcctattccaatcaacagtgtgtcaattccattgcagccactgccctccttcaagccatcacctctcatccctgctgggcacatgcagtagaaactccctttcgtgttgatgcacttatgcgtgcatggcctcttaacggtgcattcatcaatatcttatAaaaaaatcacatgaaaccagacgaaatcaggcatgagctattcttgccgactactaaattcaagaaacataagctgaggtaactagcatgaatgtattcgttaccttggcatccatcgggcccttgcaagtaagggttcccctgaaacccaagggagcaattgcagcggtatccaattccatttgatgagttatagcagtaggagttctccttgcaggcatatgacatgaagcggttcgcctcctcacagtagccaccatcaatggaccactcaagaacaacagggcggtattgaggattgttcctgttagtgttgctcagatcaacactagagaaaacataggagttctgctccacgatgaaagcctcgccacatgttggagtattattgacctccttgggcctgctgagctgcccagttatgttagtgaactccaactcaagcttctttaaccccttcggtactggtgcttggcagcaagccacgccagagcacataccatcaattatattgcttttggtggagcaaaaagaagcacagccaccgctatacccgctgctaccgttcaatagcatggctaccatatcacaacccagagctgtaaatttgtttcttgtatctgagaacgtgaaattggtcccctcaaggctgaagctagaattccttttgcactgctgagaagtggcactggccaagatgcttacaaaaccatccagcaacgagatgttaagaatcccaaacatgatattgttaatgcgtaccatcgggccagatgaggcacatgtgatctcaaacccttgggctggggcagggttcccaccaagaataccaaagggataagggatgggaatattggagcacttggaggtgcttgattccatcgaatgaacataagatgcaaagatgcatgtgaggaggagcaatggcaggagaagaaggtaaagcatcatctttgccattagtctttaacaagaaaaaatagaccatggcaatactgctatcaactaggatggaaagtttggatcatggaggagaatggactggaaatcggaggttaaataggtcacaggctcacaacctgaggaaccacttgggcacgttactcaaaatattcaaggggaaggtgcaaggaatggcaggaaaaagct
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| CDS seq | atggcaaagatgatgctttaccttcttctcctgccattgctcctcctcacatgcatctttgcatcttatgttcattcgatggaatcaagcacctccaagtgctccaatattcccatcccttatccctttggtattcttggtgggaaccctgccccagcccaagggtttgagatcacatgtgcctcatctggcccgatggtacgcattaacaatatcatgtttgggattcttaacatctcgttgctggatggttttgtaagcatcttggccagtgccacttctcagcagtgcaaaaggaattctagcttcagccttgaggggaccaatttcacgttctcagatacaagaaacaaatttacagctctgggttgtgatatggtagccatgctattgaacggtagcagcgggtatagcggtggctgtgcttctttttgctccaccaaaagcaatataattgatggtatgtgctctggcgtggcttgctgccaagcaccagtaccgaaggggttaaagaagcttgagttggagttcactaacataactgggcagctcagcaggcccaaggaggtcaataatactccaacatgtggcgaggctttcatcgtggagcagaactcctatgttttctctagtgttgatctgagcaacactaacaggaacaatcctcaataccgccctgttgttcttgagtggtccattgatggtggctactgtgaggaggcgaaccgcttcatgtcatatgcctgcaaggagaactcctactgctataactcatcaaatggaattggataccgctgcaattgctcccttgggtttcaggggaacccttacttgcaagggcccgatggatgccaagttactggactagctctgctactgcttctccttgttctcatattctggacccattggcttgttaagaagagaaaacttgcgaagataagacagagatactttatgcagaatggtggaatgttgctgaagcagaagatgttttctcaaggtgcaccactgcggatatttacttctagtgaacttgagaaagcaaccaacagcttcagtgatgacaatatcattggtcgaggtggatttgggatcgtgtacaaaggtatattatccaatcaaatggttgtggcaatcaagaaggcgcagcgagttgatcagaaccaaatggaacaattcataaacgagttggtcattctttcacaagtgaaccacaagaatgtggtccagctattaggctgttgtcttgagacagaacttcccttgttagtttatgaattcatcaccaatggggcccttttttctcatcttcaaaatacatctgtcctgatttcatgggaggaccgcctaaggattgcagttgaaactgcatcagcacttgcatacttacacttagctacaaaggaaccaattattcacagggatgtcaagtcatcaaacatactccttgacgagaacttcactgcaaaggtgtctgattttggtgcctcgaggccaataccacacaaccagacccatgtgacaactttagtgcaggggacattggggtacatggaccctgaatatttccaaacaagccagctaactgagaagagtgatgtatacagttttggggtggttcttatcgagctattgacaagacagaaacctatatctgatggtaggacagatgatgtgagaaatctagcatgtcattttagtatgttattctatcagatccagttgttggaaattgtagattctcaagtagctgaggaagctggcacgaaacatgttaaaaccgttgcacaattggctttacgatgcttaaggtcgagaggtgaagagaggccaaggatgatagaggtggcaattgaacttgaagctctgagaaggctgatgaaacaacacttggtcctgcagaccgaagaagaccctctgctctgcgaatcaggtcagcatgcagatgtaaacatcgaagcatcctccgagtttgagccttga
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| Protein seq | MAKMMLYLLLLPLLLLTCIFASYVHSMESSTSKCSNIPIPYPFGILGGNPAPAQGFEITCASSGPMVRINNIMFGILNISLLDGFVSILASATSQQCKRNSSFSLEGTNFTFSDTRNKFTALGCDMVAMLLNGSSGYSGGCASFCSTKSNIIDGMCSGVACCQAPVPKGLKKLELEFTNITGQLSRPKEVNNTPTCGEAFIVEQNSYVFSSVDLSNTNRNNPQYRPVVLEWSIDGGYCEEANRFMSYACKENSYCYNSSNGIGYRCNCSLGFQGNPYLQGPDGCQVTGLALLLLLLVLIFWTHWLVKKRKLAKIRQRYFMQNGGMLLKQKMFSQGAPLRIFTSSELEKATNSFSDDNIIGRGGFGIVYKGILSNQMVVAIKKAQRVDQNQMEQFINELVILSQVNHKNVVQLLGCCLETELPLLVYEFITNGALFSHLQNTSVLISWEDRLRIAVETASALAYLHLATKEPIIHRDVKSSNILLDENFTAKVSDFGASRPIPHNQTHVTTLVQGTLGYMDPEYFQTSQLTEKSDVYSFGVVLIELLTRQKPISDGRTDDVRNLACHFSMLFYQIQLLEIVDSQVAEEAGTKHVKTVAQLALRCLRSRGEERPRMIEVAIELEALRRLMKQHLVLQTEEDPLLCESGQHADVNIEASSEFEP |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_04g0025480 | OsLaMu_04g0025480.01 | Chr04 | 31383408 | 31386321 | - | NAM | ||
| CDS seq | atggcaaagatgatgctttaccttcttctcctgccattgctcctcctcacatgcatctttgcatcttatgttcattcgatggaatcaagcacctccaagtgctccaatattcccatcccttatccctttggtattcttggtgggaaccctgccccagcccaagggtttgagatcacatgtgcctcatctggcccgatggtacgcattaacaatatcatgtttgggattcttaacatctcgttgctggatggttttgtaagcatcttggccagtgccacttctcagcagtgcaaaaggaattctagcttcagccttgaggggaccaatttcacgttctcagatacaagaaacaaatttacagctctgggttgtgatatggtagccatgctattgaacggtagcagcgggtatagcggtggctgtgcttctttttgctccaccaaaagcaatataattgatggtatgtgctctggcgtggcttgctgccaagcaccagtaccgaaggggttaaagaagcttgagttggagttcactaacataactgggcagctcagcaggcccaaggaggtcaataatactccaacatgtggcgaggctttcatcgtggagcagaactcctatgttttctctagtgttgatctgagcaacactaacaggaacaatcctcaataccgccctgttgttcttgagtggtccattgatggtggctactgtgaggaggcgaaccgcttcatgtcatatgcctgcaaggagaactcctactgctataactcatcaaatggaattggataccgctgcaattgctcccttgggtttcaggggaacccttacttgcaagggcccgatggatgccaagttactggactagctctgctactgcttctccttgttctcatattctggacccattggcttgttaagaagagaaaacttgcgaagataagacagagatactttatgcagaatggtggaatgttgctgaagcagaagatgttttctcaaggtgcaccactgcggatatttacttctagtgaacttgagaaagcaaccaacagcttcagtgatgacaatatcattggtcgaggtggatttgggatcgtgtacaaaggtatattatccaatcaaatggttgtggcaatcaagaaggcgcagcgagttgatcagaaccaaatggaacaattcataaacgagttggtcattctttcacaagtgaaccacaagaatgtggtccagctattaggctgttgtcttgagacagaacttcccttgttagtttatgaattcatcaccaatggggcccttttttctcatcttcaaaatacatctgtcctgatttcatgggaggaccgcctaaggattgcagttgaaactgcatcagcacttgcatacttacacttagctacaaaggaaccaattattcacagggatgtcaagtcatcaaacatactccttgacgagaacttcactgcaaaggtgtctgattttggtgcctcgaggccaataccacacaaccagacccatgtgacaactttagtgcaggggacattggggtacatggaccctgaatatttccaaacaagccagctaactgagaagagtgatgtatacagttttggggtggttcttatcgagctattgacaagacagaaacctatatctgatggtaggacagatgatgtgagaaatctagcatgtcattttagtatgttattctatcagatccagttgttggaaattgtagattctcaagtagctgaggaagctggcacgaaacatgttaaaaccgttgcacaattggctttacgatgcttaaggtcgagaggtgaagagaggccaaggatgatagaggtggcaattgaacttgaagctctgagaaggctgatgaaacaacacttggtcctgcagaccgaagaagaccctctgctctgcgaatcaggtcagcatgcagatgtaaacatcgaagcatcctccgagtttgagccttga
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| Protein seq | MAKMMLYLLLLPLLLLTCIFASYVHSMESSTSKCSNIPIPYPFGILGGNPAPAQGFEITCASSGPMVRINNIMFGILNISLLDGFVSILASATSQQCKRNSSFSLEGTNFTFSDTRNKFTALGCDMVAMLLNGSSGYSGGCASFCSTKSNIIDGMCSGVACCQAPVPKGLKKLELEFTNITGQLSRPKEVNNTPTCGEAFIVEQNSYVFSSVDLSNTNRNNPQYRPVVLEWSIDGGYCEEANRFMSYACKENSYCYNSSNGIGYRCNCSLGFQGNPYLQGPDGCQVTGLALLLLLLVLIFWTHWLVKKRKLAKIRQRYFMQNGGMLLKQKMFSQGAPLRIFTSSELEKATNSFSDDNIIGRGGFGIVYKGILSNQMVVAIKKAQRVDQNQMEQFINELVILSQVNHKNVVQLLGCCLETELPLLVYEFITNGALFSHLQNTSVLISWEDRLRIAVETASALAYLHLATKEPIIHRDVKSSNILLDENFTAKVSDFGASRPIPHNQTHVTTLVQGTLGYMDPEYFQTSQLTEKSDVYSFGVVLIELLTRQKPISDGRTDDVRNLACHFSMLFYQIQLLEIVDSQVAEEAGTKHVKTVAQLALRCLRSRGEERPRMIEVAIELEALRRLMKQHLVLQTEEDPLLCESGQHADVNIEASSEFEP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.388628 | 2.741420 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0599000 | RBH | 1.071896 | 0.648681 | 0.966047 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g51050 | RBH | 0.723473 | 0.436175 | 0.248612 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0599000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0025250 | SBH | 0.105336 | 4.646637 | 1.740748 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0026030 | RBH | 0.096886 | 0.893406 | 0.900697 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0025760 | RBH | 0.680968 | 0.830622 | 2.086954 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0025480 | RBH | 0.113776 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0025740 | RBH | 2.183318 | 5.638437 | 5.047546 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0477600 | RBH | 2.6170475 | 4.767131 | 3.4975425 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0024490 | RBH | 0.211626 | 0.093554 | 0.346981 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0481300 | SBH | 1.294575 | 0.4124455 | 0.016388 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0024960 | RBH | 0.152254 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0024790 | RBH | 0.601692 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0024880 | RBH | 0.000000 | 25.030178 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0025310 | RBH | 0.465381 | 0.279860 | 0.591614 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0025490 | RBH | 0.130379 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G024710 | RBH | 0.338282 | 0.352529 | 1.221386 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0024600 | RBH | 0.517574 | 5.068007 | 4.102749 |
