Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_03g0035390 | OGI:03088710 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr03:34309776-34311458 | ||||||||
| Gene Symbol | SP3, OsDof15, Dof15, OsDof-15, DOF15 | ||||||||||
| DNA seq | cattactacaatcaagccctgtactttgcatttcagagtacgtcgaaagtgaaatttgcagctgagataagtacgtccacgagcttgcagggaatgtaaaccttacatccatacatggatcaacctgaacgaaaccgacaacacacgtacacatctcatagtacaaccccatctatgcattgatcacgacttaaacactatacccagttaccaccaaaccctaggtaaaaacctaataataagtaaacagtaaaaaaggttacttgatcgatccccactgattaacaaaaacaccagtaactaaaacacccttgattaaacccctcagagtcctcacactgattaaccgaaaccacacaacatcgatgatgattaaagctaaaccgatcgagagctacactagctagtaatgtcatgcttgcatgagacgacgtcgtcgccgtcgtctatctcaggggaacgcgccgttgggagtgggcaagtccggccacggcaccgacatcgccgccgggccattccagtactgcatctccggcgcggcgagcgacacgggtggcaggtccatcccgaccgtgttgctggtcggcgcggcggcggagacgctcgacagcgccgacgggagtgaggtcaccgcggtggtgcaagggagggacgcggtggcgacgtcgtacggcgcctgggggcgccccgcgttgctcaccaccgcgtgcagctggtcgctgtagtagctcgccgccggcgaggacgacgccgacgagggcagcttgaggccgaggctcgacagcacgtcgtggtggcccagcgtccccatgccgagctgggagtccatgtgcggcggcggtggagtgaccggccgcggcgcggactgtggccagagcgacgccgccgtgccggcgccggcgccattgggagcgcctggcaggatctggaggtgacccatggtgtccagcccaagaagccggtggacattgctgccgccgtggccctgcactcccctggcgctgttgagcagcgccatgaggtgcgcggtggcggcctgctgcccggaggcccaggacactggcccgccgccgaggccgagcggcggcgcggccttgcaagacatgggcggcttggcgaccggcgccggcatggggcgcggcttgcggcacccgccgccgatggggacgttgcggagcgcgccgcccttggtccagtaccggcggcacgtcttgcagaagtggcgcggctgggtgaggttgtagttgttgtagtagcagaacttggtgttcgacgagttgcaccgcgggcaccgcagcggcgcctgctccgccgcgccgccaccctgcccctgcccgtgcggcgacgaggtcgccgacgacgacctctgctgcgtcgcctgcgccgacgagcgcgacgacgtcgacgacgacgacgtgggcgacgggttggacacgataggctgcagcaccaccggctgggaggcgtggttcagagcgctggcgcccttgagctggtccatggttgtccctccaaggagttcttggatcatggtgatgaaatggatggatgatgtagaaatcacaagctcaaaaggcttcttgaagctgagaagaaggcaaaggcagtgaggtatgtgttggctttcagaagctttgtggaaatggatcagatgatggtgttgggtggggtagttatggtagt
More
|
||||||||||
| CDS seq | atgatccaagaactccttggagggacaaccatggaccagctcaagggcgccagcgctctgaaccacgcctcccagccggtggtgctgcagcctatcgtgtccaacccgtcgcccacgtcgtcgtcgtcgacgtcgtcgcgctcgtcggcgcaggcgacgcagcagaggtcgtcgtcggcgacctcgtcgccgcacgggcaggggcagggtggcggcgcggcggagcaggcgccgctgcggtgcccgcggtgcaactcgtcgaacaccaagttctgctactacaacaactacaacctcacccagccgcgccacttctgcaagacgtgccgccggtactggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggtgccgcaagccgcgccccatgccggcgccggtcgccaagccgcccatgtcttgcaaggccgcgccgccgctcggcctcggcggcgggccagtgtcctgggcctccgggcagcaggccgccaccgcgcacctcatggcgctgctcaacagcgccaggggagtgcagggccacggcggcagcaatgtccaccggcttcttgggctggacaccatgggtcacctccagatcctgccaggcgctcccaatggcgccggcgccggcacggcggcgtcgctctggccacagtccgcgccgcggccggtcactccaccgccgccgcacatggactcccagctcggcatggggacgctgggccaccacgacgtgctgtcgagcctcggcctcaagctgccctcgtcggcgtcgtcctcgccggcggcgagctactacagcgaccagctgcacgcggtggtgagcaacgcggggcgcccccaggcgccgtacgacgtcgccaccgcgtccctcccttgcaccaccgcggtgacctcactcccgtcggcgctgtcgagcgtctccgccgccgcgccgaccagcaacacggtcgggatggacctgccacccgtgtcgctcgccgcgccggagatgcagtactggaatggcccggcggcgatgtcggtgccgtggccggacttgcccactcccaacggcgcgttcccctga
More
|
||||||||||
| Protein seq | MIQELLGGTTMDQLKGASALNHASQPVVLQPIVSNPSPTSSSSTSSRSSAQATQQRSSSATSSPHGQGQGGGAAEQAPLRCPRCNSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKPRPMPAPVAKPPMSCKAAPPLGLGGGPVSWASGQQAATAHLMALLNSARGVQGHGGSNVHRLLGLDTMGHLQILPGAPNGAGAGTAASLWPQSAPRPVTPPPPHMDSQLGMGTLGHHDVLSSLGLKLPSSASSSPAASYYSDQLHAVVSNAGRPQAPYDVATASLPCTTAVTSLPSALSSVSAAAPTSNTVGMDLPPVSLAAPEMQYWNGPAAMSVPWPDLPTPNGAFP |
||||||||||
| Function | Dof zinc finger protein DOF5.7 [UniProtKB/Swiss-Prot:Q9LSL6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_03g0035390 | OsLaMu_03g0035390.01 | Chr03 | 34309776 | 34311458 | - | NAM | ||
| CDS seq | atgatccaagaactccttggagggacaaccatggaccagctcaagggcgccagcgctctgaaccacgcctcccagccggtggtgctgcagcctatcgtgtccaacccgtcgcccacgtcgtcgtcgtcgacgtcgtcgcgctcgtcggcgcaggcgacgcagcagaggtcgtcgtcggcgacctcgtcgccgcacgggcaggggcagggtggcggcgcggcggagcaggcgccgctgcggtgcccgcggtgcaactcgtcgaacaccaagttctgctactacaacaactacaacctcacccagccgcgccacttctgcaagacgtgccgccggtactggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggtgccgcaagccgcgccccatgccggcgccggtcgccaagccgcccatgtcttgcaaggccgcgccgccgctcggcctcggcggcgggccagtgtcctgggcctccgggcagcaggccgccaccgcgcacctcatggcgctgctcaacagcgccaggggagtgcagggccacggcggcagcaatgtccaccggcttcttgggctggacaccatgggtcacctccagatcctgccaggcgctcccaatggcgccggcgccggcacggcggcgtcgctctggccacagtccgcgccgcggccggtcactccaccgccgccgcacatggactcccagctcggcatggggacgctgggccaccacgacgtgctgtcgagcctcggcctcaagctgccctcgtcggcgtcgtcctcgccggcggcgagctactacagcgaccagctgcacgcggtggtgagcaacgcggggcgcccccaggcgccgtacgacgtcgccaccgcgtccctcccttgcaccaccgcggtgacctcactcccgtcggcgctgtcgagcgtctccgccgccgcgccgaccagcaacacggtcgggatggacctgccacccgtgtcgctcgccgcgccggagatgcagtactggaatggcccggcggcgatgtcggtgccgtggccggacttgcccactcccaacggcgcgttcccctga
More
|
|||||||
| Protein seq | MIQELLGGTTMDQLKGASALNHASQPVVLQPIVSNPSPTSSSSTSSRSSAQATQQRSSSATSSPHGQGQGGGAAEQAPLRCPRCNSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKPRPMPAPVAKPPMSCKAAPPLGLGGGPVSWASGQQAATAHLMALLNSARGVQGHGGSNVHRLLGLDTMGHLQILPGAPNGAGAGTAASLWPQSAPRPVTPPPPHMDSQLGMGTLGHHDVLSSLGLKLPSSASSSPAASYYSDQLHAVVSNAGRPQAPYDVATASLPCTTAVTSLPSALSSVSAAAPTSNTVGMDLPPVSLAAPEMQYWNGPAAMSVPWPDLPTPNGAFP
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0764900 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g55610 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0764900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0035830 | RBH | 0.0 | 3.113239 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0035500 | RBH | 0.0 | 0.638980 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0035590 | RBH | 0.0 | 4.926011 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0035890 | RBH | 0.0 | 0.103985 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0035410 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0540300 | RBH | 0.205604 | 1.7290505 | 2.9616015 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0035200 | RBH | 0.0 | 0.190609 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0540200 | RBH | 0.4978485 | 0.779466 | 10.227913 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0035680 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0035700 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0035360 | RBH | 0.0 | 5.540710 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0035420 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G035200 | RBH | 0.0 | 0.526727 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0035010 | RBH | 0.0 | 0.0 | 0.466377 |
