Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_03g0031540 | OGI:03080670 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr03:31099098-31104255 | ||||||||
| Gene Symbol | OsWD40-84, OsWD40-85 | ||||||||||
| DNA seq | gtgaaacaaacattggtacataacgtccgagcatagcatttgcatgagctgatcagaagtcctcaagcatgtatcaagtgtaacaacagCctcgaggcAaacaaaaatcAagggaaatggagaaaaaatgaaACaaAaactcaaccatgtataacactacttattccttacaatcagtaaacatcctggtaaaatatatcatagcgaagtcttaagagagactagaaagaatataagggagcatatctaccgacgcttatctcgactgcgtaggggagcagaggaggcctgaagcatctgcaccaaccacggcaagctcacatatggtacaaagctgcccttcgatcgaaggaacaaaccgggagccacagtacgggcaggaaacatccttctggCcacggtagattggaacatacgtggcgccacagacaacaaatggatttctgtagtcatagttcagctcagagctatccttcttgccactgcactgctgctgcacctgtcgagccctccttgcttgggcctcattagggttgttctccagaagcatccttgcaaagtgctctgcagtagcgaagttcttttgcttgtagcacagacccatagcgcttccaagcacaagcctcatatgaactctctgaagcttgcagttagtgaagtaagccgccaattcttgttggcggttgacatcatctctcagctccttcctcttaagttccatcctcaggccaagaacatactccctcacaatctcgatcaactctttcacttcatccacttccctcctcgagtctaccacgataagagggatggtatgcaagatgctaaggaactgcctcagggcttctgggaacttaCcatctgtggtggCcttataggcagccttgagtctgtcttccatttgtgggaaggtgaaaacaagtgcaggagggcctctcacgttaggacttgcagactcgctccaacctttctcaacagcgaTtggtattatgggggcagttgcaagtgcacgaagatatgagtggctgcccatgtgcagatcaacaaacaggggcttgaggggagcaaagttttttatgcccaactggcggctaagcaacctcattgcagtgtcaaagttccctgctgcggcatgctccccagcaagagaagatttctgagtccaaatcaggctgacaggcatgcctggtggaggagcaacgaagaCcgctgagcgtgcattgccagcaTttttaggggtctctgcttcaggcggaagttccagatcttctaggtCccaaccaccttcctcgccatcctcctcatttgcttcaccctcctcagcatcaaaaccgtcaccaccatttgccatcgcttcgcttgcatcaaccatatccaggtcctcatcaccccagtcagcaccagcagcttcatcgtcttcctcaagttcagccttcccagtagcatccagtccaccctcaaagataccatgcatcaccctaagcaatggccaatcaccactggctgtaagaggagcaggggggatcaaaagagagcgagcttttccttcaggaagagaaggaatattttcacccagctcagcggcaagcctatcagcaatttctgtgagcccatgggtggtagcagtaatataagcaagaggtagctgtccagcattctctaggatctcaactctcttcaacgcatcaccaagatacagagcattgtggaattgacccatcaggttattgttctgtccagcaaTtttgcacatgaaacccaccttgtccatgtaaccagtaataagatataggaaagcaagcctctcaaaattcttcgtacgttggtatgcatattccacaataccaacatttccctgcctcagggcctcaattcccaacctgtaccagtgatccttgtcatcaatctcttttgcagaagcaactgcgatttggatgttaccactctcaagagcaaggttaaatcttgtcttctcatctttcacaaagtggagggcaacttctggaaagcctttctgttgtaaataagaaatcacagcttgcccacacagctgggaattcttgatcatactcatcacatgatcataccgtttgcgtagaagggccagcttgaaaatgtactcagatgcatcaactgtgaccagcttgttcttaccatcacgatctagacagaatatattgttcccaataacccttgttatgtatataggaacatcgagggttttaataatcccactatctccattgggaaggcaatacttgatatgattcagggtagtgtaaataaaCacaccattctcatcccaggcaccacttttcacacgaatggtttcgtgcagtgtacagcgatggacgagcttcttgtttgctataaccactgcatgcttgctcagcagtgcgacagattccatatcactagaccaaacaacatatttaacagaaggtgcctggagctcaccaagaattaacctttgctgcagatcaaagatggtcactcggtcttcggctttgcacagcaagttaccagtcccagcataataaattgcatccgtggcaataggaagagggcttttctttacgatttcattcttaagattcttcaccaaaacttgattgctactcttctcaaggactgcaaacctgttgcgtgccacgaaaacagctgacccaccagctcccttctttgcatcctgcaaatagtcagccctgccagcagaatccttgggaacaatgtagagttcgtatgagcctccatccacatcagagcaaatcaggacagcattttcagttggactgtaagatagtgtcTtTGGGTGACTGGTTCAAGCTCACTGATCCAGGTCTTCTTATTGGAGCAAGCTGAACTTCCTTCTGTGTGGTGAATTCAAAAAAACGAAGAAAACGGTCCTTCACATAGAAAACAGTATCTCCACTCACAGAGAAAGCTGGACGTTCCCTCTCCAATTTAAACACAATCATACCACTGTCATGACCAGCGGCAAGAAGATTtcatctcagggtgagcagaaagaatccagaaacgatcatgttcccgcctgaacgtttgaataccggttcgctttgtggcatcccagatgcgaatgcttttgtcctctgagttggacacaatgatgtcttgcttagcatggaacatcacgcatgacacattattcatgtgtccccgcaaagtatcaacttcccaagccttcgtgtctgtccaaaaaaatagcacatttagattacattaattcaaatacctcaatagcggtttgctgcatatgcatatagttttgtgtttggccagtctagcaatatgcagaagaatgAaAGTGCTATGCAACAAGAATGACCACCTTTCATTCCAACCAAAGTGACAAACTAGAGGTCAGGAGCTAGTTACTAATTGAGTAATTGTGAAGCATGTTTCTTGCATTCAGCTTGTTCGGTAATTACTACTTCTGTGAAAGTATGATAAATTGAAGAAAACAAAAGGAATTCATAATAAAATCAAATCCATAGTTTGTAGTAATAATATATGGAAGGACAAATGAATAAAAACACAAATATGCAAGCGTTTATCCATGGAAAATGGTAATAGAAAAGTTTAAGGCCTTGTAGCAGTATTACCATTCATTCTCCATAGCTTCACTTGTCGGTCATCTGCCCCGGAAACAATGAGTGGCAATGTGGGGTGAAATGATGCCCAGTTCACCCCACGGTCATGCCCTTCCAACACATATTTTACAACTGCATCAACACCTCCAAACAGATCTGTGTTCATCCtgggtgagacgcaggatgtcatctgcaggtgacaccgtcttcttcctcaaagcaccaatatcccaaacacggacagtctgatccagtgatgctgacacaaccaggtcctccttgggatggaatgatgcgcacatgacatagtggttatgtccagtcagcacagctacacatgtgcgtgactgccagttccagatccggattgtctggtcatcactagcacttactatccatgggtattcgtggtggaattgcacggtgcgaatatagtcaaggtgCccgtgaagtgtgaagaggcagcggtgtgtcttgtaattccacaccttaatcttgtaatcatcacctgcaatgcatcacagaaatcttagaatagttcagaagttcaaccattccgcatcccaatcatattagtccaccgagcaatacgaccggacaccagtatgacttcgtttcaagtttcaacagatcccaaagtccaggtttcaacaaaTtccaaaggtccatgatggcaccttgccatcgctaacttgctacttgtatcagattcacactacaaaagctgattctctctggttgagggctacacatcgactcattctacttcctatcatatctcttctacggaaggattgcaaaatcgatggagatcccggtcataaatagaaacaaaatgtcacatgaaggtttcaaactaacaattcaccaaacagttcatcttaagctaagagaatagaaccagcaccagatccaaccaacgaggatcacttgcacaaccaccactgtacacgaaacgcgatctaatcgcaaaccacgtacgcgtggtatctacctcgagtgtcctcattgcaccatgaaatggatcacgcggaaatctaacggccacgcgagacgtcctccaaatccgaggaggaggatccgaccaaacacgcgtcgacgccacacccgaccccgcgagcggcgaaccaccacagcgaaaaaaaaaatgctcgaggcgggcgagatctaggcagggaggaatcgatgtttacctccggagacgaagagcggctgcgtggcgtggaagtggacgccgcggacggggccgtcgtgctcgtcgaagcggtcgaggagggtgcccatgcggtagtcccacatctggatcaCcccgctgtggaggctggccaggatccatggccgccgcgggtggaagctcagccccttcaCccggttgctcttcgtctcgaacttggtcagcatcttctctagccgtccccccggcgcgacggcggcggcggcggcgaaaCccctcgccgctgaggcgcgcggaggagagagaggggggaGggggggtggtatggcgttgggtggagaggacgaaggtgTttttgagatctcggggt
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| CDS seq | atgctgaccaagttcgagacgaagagcaaccggGtgaaggggctgagcttccacccgcggcggccatggatcctggccagcctccacagcgggGtgatccagatgtgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttccacgccacgcagccgctcttcgtctccggaggtgatgattacaagattaaggtgtggaattacaagacacaccgctgcctcttcacacttcacggGcaccttgactatattcgcaccgtgcaattccaccacgaatacccatggatagtaagtgctagtgatgaccagacaatccggatctggaactggcagtcacgcacatgtgtagctgtgctgactggacataaccactatgtcatgtgcgcatcattccatcccaaggaggacctggttgtgtcagcatcactggatcagactgtccgtgtttgggatattggtgctttgaggaagaagacgatgacatcctgcgtctcacccaGGATGAACACAGATCTGTTTGGAGGTGTTGATGCAGTTGTAAAATATGTGTTGGAAGGGCATGACCGTGGGGTGAACTGGGCATCATTTCACCCCACATTGCCACTCATTGTTTCCGGGGCAGATGACCGACAAGTGAAGCTATGGAGAATGAATGacacgaaggcttgggaagttgatactttgcggggacacatgaataatgtgtcatgcgtgatgttccatgctaagcaagacatcattgtgtccaactcagaggacaaaagcattcgcatctgggatgccacaaagcgaaccggtattcaaacTCACCCAaAgacactatcttacagtccaactgaaaatgctgtcctgatttgctctgatgtggatggaggctcatacgaactctacattgttcccaaggattctgctggcagggctgactatttgcaggatgcaaagaagggagctggtgggtcagctgttttcgtggcacgcaacaggtttgcagtccttgagaagagtagcaatcaagttttggtgaagaatcttaagaatgaaatcgtaaagaaaagccctcttcctattgccacggatgcaatttattatgctgggactggtaacttgctgtgcaaagccgaagaccgagtgaccatctttgatctgcagcaaaggttaattcttggtgagctccaggcaccttctgttaaatatgttgtttggtctagtgatatggaatctgtcgcactgctgagcaagcatgcagtggttatagcaaacaagaagctcgtccatcgctgtacactgcacgaaaccattcgtgtgaaaagtggtgcctgggatgagaatggtgtGtttatttacactaccctgaatcatatcaagtattgccttcccaatggagatagtgggattattaaaaccctcgatgttcctatatacataacaagggttattgggaacaatatattctgtctagatcgtgatggtaagaacaagctggtcacagttgatgcatctgagtacattttcaagctggcccttctacgcaaacggtatgatcatgtgatgagtatgatcaagaattcccagctgtgtgggcaagctgtgatttcttatttacaacagaaaggctttccagaagttgccctccactttgtgaaagatgagaagacaagatttaaccttgctcttgagagtggtaacatccaaatcgcagttgcttctgcaaaagagattgatgacaaggatcactggtacaggttgggaattgaggccctgaggcagggaaatgttggtattgtggaatatgcataccaacgtacgaagaattttgagaggcttgctttcctatatcttattactggttacatggacaaggtgggtttcatgtgcaaaAttgctggacagaacaataacctgatgggtcaattccacaatgctctgtatcttggtgatgcgttgaagagagttgagatcctagagaatgctggacagctacctcttgcttatattactgctaccacccatgggctcacagaaattgctgataggcttgccgctgagctgggtgaaaatattccttctcttcctgaaggaaaagctcgctctcttttgatcccccctgctcctcttacagccagtgcaaatgaggaggatggcgaggaaggtggttggGacctagaagatctggaacttccgcctgaagcagagacccctaaaaAtgctggcaatgcacgctcagcgGtcttcgttgctcctccaccaggcatgcctgtcagcctgatttggactcagaaatcttctcttgctggggagcatgccgcagcagggaactttgacactgcaatgaggttgcttagccgccagttgggcataaaaaactttgctcccctcaagcccctgtttgttgatctgcacatgggcagccactcatatcttcgtgcacttgcaactgcccccataataccaAtcgctgttgagaaaggttggagcgagtctgcaagtcctaacgtgagaggccctcctgcacttgttttcaccttcccacaaatggaagacagactcaaggctgcctataagGccaccacagatgGtaagttcccagaagccctgaggcagttccttagcatcttgcataccatccctcttatcgtggtagactcgaggagggaagtggatgaagtgaaagagttgatcgagattgtgagggagtatgttcttggcctgaggatggaacttaagaggaaggagctgagagatgatgtcaaccgccaacaagaattggcggcttacttcactaactgcaagcttcagagagttcatatgaggcttgtgcttggaagcgctatgggtctgtgctacaagcaaaagaacttcgctactgcagagcactttgcaaggatgcttctggagaacaaccctaatgaggcccaagcaaggagggctcgacaggtgcagcagcagtgcagtggcaagaaggatagctctgagctgaactatgactacagaaatccatttgttgtctgtggcgccacgtatgttccaatctaccgtgGccagaaggatgtttcctgcccgtactgtggctcccggtttgttccttcgatcgaagggcagctttgtaccatatgtgagcttgccgtggttggtgcagatgcttcaggcctcctctgctcccctacgcagtcgagataa
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| Protein seq | MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTMTSCVSPRMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTHPKTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRADYLQDAKKGAGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIVKKSPLPIATDAIYYAGTGNLLCKAEDRVTIFDLQQRLILGELQAPSVKYVVWSSDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNKLVTVDASEYIFKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLGDALKRVEILENAGQLPLAYITATTHGLTEIADRLAAELGENIPSLPEGKARSLLIPPAPLTASANEEDGEEGGWDLEDLELPPEAETPKNAGNARSAVFVAPPPGMPVSLIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKPLFVDLHMGSHSYLRALATAPIIPIAVEKGWSESASPNVRGPPALVFTFPQMEDRLKAAYKATTDGKFPEALRQFLSILHTIPLIVVDSRREVDEVKELIEIVREYVLGLRMELKRKELRDDVNRQQELAAYFTNCKLQRVHMRLVLGSAMGLCYKQKNFATAEHFARMLLENNPNEAQARRARQVQQQCSGKKDSSELNYDYRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSIEGQLCTICELAVVGADASGLLCSPTQSR |
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| Function | Coatomer subunit alpha-1 [UniProtKB/Swiss-Prot:Q9AUR8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_03g0031540 | OsLaMu_03g0031540.01 | Chr03 | 31099354 | 31104255 | - | NAM | ||
| CDS seq | atgctgaccaagttcgagacgaagagcaaccggGtgaaggggctgagcttccacccgcggcggccatggatcctggccagcctccacagcgggGtgatccagatgtgggactaccgcatgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttccacgccacgcagccgctcttcgtctccggaggtgatgattacaagattaaggtgtggaattacaagacacaccgctgcctcttcacacttcacggGcaccttgactatattcgcaccgtgcaattccaccacgaatacccatggatagtaagtgctagtgatgaccagacaatccggatctggaactggcagtcacgcacatgtgtagctgtgctgactggacataaccactatgtcatgtgcgcatcattccatcccaaggaggacctggttgtgtcagcatcactggatcagactgtccgtgtttgggatattggtgctttgaggaagaagacgatgacatcctgcgtctcacccaGGATGAACACAGATCTGTTTGGAGGTGTTGATGCAGTTGTAAAATATGTGTTGGAAGGGCATGACCGTGGGGTGAACTGGGCATCATTTCACCCCACATTGCCACTCATTGTTTCCGGGGCAGATGACCGACAAGTGAAGCTATGGAGAATGAATGacacgaaggcttgggaagttgatactttgcggggacacatgaataatgtgtcatgcgtgatgttccatgctaagcaagacatcattgtgtccaactcagaggacaaaagcattcgcatctgggatgccacaaagcgaaccggtattcaaacTCACCCAaAgacactatcttacagtccaactgaaaatgctgtcctgatttgctctgatgtggatggaggctcatacgaactctacattgttcccaaggattctgctggcagggctgactatttgcaggatgcaaagaagggagctggtgggtcagctgttttcgtggcacgcaacaggtttgcagtccttgagaagagtagcaatcaagttttggtgaagaatcttaagaatgaaatcgtaaagaaaagccctcttcctattgccacggatgcaatttattatgctgggactggtaacttgctgtgcaaagccgaagaccgagtgaccatctttgatctgcagcaaaggttaattcttggtgagctccaggcaccttctgttaaatatgttgtttggtctagtgatatggaatctgtcgcactgctgagcaagcatgcagtggttatagcaaacaagaagctcgtccatcgctgtacactgcacgaaaccattcgtgtgaaaagtggtgcctgggatgagaatggtgtGtttatttacactaccctgaatcatatcaagtattgccttcccaatggagatagtgggattattaaaaccctcgatgttcctatatacataacaagggttattgggaacaatatattctgtctagatcgtgatggtaagaacaagctggtcacagttgatgcatctgagtacattttcaagctggcccttctacgcaaacggtatgatcatgtgatgagtatgatcaagaattcccagctgtgtgggcaagctgtgatttcttatttacaacagaaaggctttccagaagttgccctccactttgtgaaagatgagaagacaagatttaaccttgctcttgagagtggtaacatccaaatcgcagttgcttctgcaaaagagattgatgacaaggatcactggtacaggttgggaattgaggccctgaggcagggaaatgttggtattgtggaatatgcataccaacgtacgaagaattttgagaggcttgctttcctatatcttattactggttacatggacaaggtgggtttcatgtgcaaaAttgctggacagaacaataacctgatgggtcaattccacaatgctctgtatcttggtgatgcgttgaagagagttgagatcctagagaatgctggacagctacctcttgcttatattactgctaccacccatgggctcacagaaattgctgataggcttgccgctgagctgggtgaaaatattccttctcttcctgaaggaaaagctcgctctcttttgatcccccctgctcctcttacagccagtgcaaatgaggaggatggcgaggaaggtggttggGacctagaagatctggaacttccgcctgaagcagagacccctaaaaAtgctggcaatgcacgctcagcgGtcttcgttgctcctccaccaggcatgcctgtcagcctgatttggactcagaaatcttctcttgctggggagcatgccgcagcagggaactttgacactgcaatgaggttgcttagccgccagttgggcataaaaaactttgctcccctcaagcccctgtttgttgatctgcacatgggcagccactcatatcttcgtgcacttgcaactgcccccataataccaAtcgctgttgagaaaggttggagcgagtctgcaagtcctaacgtgagaggccctcctgcacttgttttcaccttcccacaaatggaagacagactcaaggctgcctataagGccaccacagatgGtaagttcccagaagccctgaggcagttccttagcatcttgcataccatccctcttatcgtggtagactcgaggagggaagtggatgaagtgaaagagttgatcgagattgtgagggagtatgttcttggcctgaggatggaacttaagaggaaggagctgagagatgatgtcaaccgccaacaagaattggcggcttacttcactaactgcaagcttcagagagttcatatgaggcttgtgcttggaagcgctatgggtctgtgctacaagcaaaagaacttcgctactgcagagcactttgcaaggatgcttctggagaacaaccctaatgaggcccaagcaaggagggctcgacaggtgcagcagcagtgcagtggcaagaaggatagctctgagctgaactatgactacagaaatccatttgttgtctgtggcgccacgtatgttccaatctaccgtgGccagaaggatgtttcctgcccgtactgtggctcccggtttgttccttcgatcgaagggcagctttgtaccatatgtgagcttgccgtggttggtgcagatgcttcaggcctcctctgctcccctacgcagtcgagataa
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| Protein seq | MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTMTSCVSPRMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTHPKTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRADYLQDAKKGAGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIVKKSPLPIATDAIYYAGTGNLLCKAEDRVTIFDLQQRLILGELQAPSVKYVVWSSDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNKLVTVDASEYIFKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLGDALKRVEILENAGQLPLAYITATTHGLTEIADRLAAELGENIPSLPEGKARSLLIPPAPLTASANEEDGEEGGWDLEDLELPPEAETPKNAGNARSAVFVAPPPGMPVSLIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKPLFVDLHMGSHSYLRALATAPIIPIAVEKGWSESASPNVRGPPALVFTFPQMEDRLKAAYKATTDGKFPEALRQFLSILHTIPLIVVDSRREVDEVKELIEIVREYVLGLRMELKRKELRDDVNRQQELAAYFTNCKLQRVHMRLVLGSAMGLCYKQKNFATAEHFARMLLENNPNEAQARRARQVQQQCSGKKDSSELNYDYRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSIEGQLCTICELAVVGADASGLLCSPTQSR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_03g0031540 | OsLaMu_03g0031540.02 | Chr03 | 31099098 | 31100558 | - | IsoSeq | ||
| CDS seq | atgactacagaaatccatttgttgtctgtggcgccacgtatgttccaatctaccgtgGccagaaggatgtttcctgcccgtactgtggctcccggtttgttccttcgatcgaagggcagctttgtaccatatgtgagcttgccgtggttggtgcagatgcttcaggcctcctctgctcccctacgcagtcgagataagcgt
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| Protein seq | MTTEIHLLSVAPRMFQSTVARRMFPARTVAPGLFLRSKGSFVPYVSLPWLVQMLQASSAPLRSRDKR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.935216 | 33.866695 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0711500 | RBH | 5.629846 | 4.639546 | 17.905762 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g50340 | SBH | 2.197629 | 1.985463 | 3.861235 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0711500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0032070 | SBH | 1.142590 | 13.606533 | 20.103516 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0031780 | SBH | 0.363120 | 8.438686 | 6.238850 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0031870 | SBH | 1.957504 | 30.696470 | 26.162701 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0031950 | SBH | 0.412183 | 1.489891 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0031670 | SBH | 9.913854 | 55.447201 | 38.829842 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0493800 | SBH | 20.8968555 | 38.763569 | 42.299423 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0031340 | SBH | 0.635160 | 2.781918 | 3.335236 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0493600 | SBH | 23.7123985 | 29.298061 | 53.1929395 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0031740 | SBH | 0.374285 | 0.404623 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0031780 | SBH | 1.297806 | 42.428921 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0031730 | SBH | 7.116959 | 37.296608 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0031520 | SBH | 1.239501 | 3.013593 | 3.451436 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0001310 | SBH | 0.298787 | 23.356428 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G031510 | SBH | 0.896877 | 21.403778 | 9.552630 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0031390 | SBH | 2.059277 | 42.023285 | 21.642679 |
