Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_03g0016070 | OGI:03032340 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr03:12435076-12440138 | ||||||||
| Gene Symbol | PHR1, OsPHR1 | ||||||||||
| DNA seq | gtgcgcctcacagggccgcgcaccaggttctctctccccccctccccatccctcccctcccctcaacgaaacgaaatctcgatcaatctctcctccattcccgcatcctctctctctctccctcctcaccctcacctcatcgtcgcgacaccgaggggaaaaaaaaaagcgatcgccccaatcagattccccccccccctcctccccacttccctcgtcgcctccgaaaagccaagccgctccccgccgcgccgatcgcgccgccgcagccccaggtacgcctcctctcctcccatccaatctagtctcagtccacgccgtctccatcgatcggccccggttggagcctatggaacaggagcggacgagcgcgtgcccgccggggagaagctGggggGTAGGGGGTTTTTGGTTTAGGGTTTTGATCGCGACATGTAGGGCGTGGGAGTTTGGTGGggggggagcggctgtaccgcatgctcgtgagcggacatgatggtgttggtacagggaattatggggggttgattctgtgagggtacgaaccgggggagcttcacggcagaattattaggtagtactgtggagtggtgtagtgctgtgatggtttgcttccgccctagaaacaggatattctagtgcttaaccattggttgccttactgtgagttaatcggtgcaggcgtgatagagaagtacacatttcatgtgtgtgtgtggcaaaaaggtcttaggtaaagagttatttgcttgatagtaggaatagatggttggggccagttgtgccaccactattcaggccatcattatggcgccctgttccacagagttctgcatgtgggtttgctatgcaggaaaaatatcactttatagcttcaagaaaaatgttaactgaataataccttggaactggaatttgcggcatttttgcaatgtagctagaagtcgaacctgcatcgtgggtattacattttaacttttccaaaagtacccggtttgtaatgctaataaatgaggtttatgcaatgtaatctaccattggagtggtcaaaatattgggggtgtaaaatttgttgttgcgcatcagtgtacaaaaggtttacacctagatgtacatttcatggcttagccgtttttgttttctgcttgtgtcatctgcttgacactagcaacactgctgcttattcatgattagttccagcatgcttaaatgtgtgaaatattatttacagtctatatatgttccttacaattatactattatttccatgacctcaaaataagctcacccctttaactcttcatttcttaatcatgtacagagtgatggattaacattttgggcgagtttgatctgtagaaaggcattcaaactattttatgggaaagaagcaaatcttatgcactatttgcagaattgcagtgagggaagtttgatctgaggcagttgcaaaacaagtatttctggagagatgtcatcctccttgcctattctaccgaaatctttgaaagatatcccaagatcccataatacccagaatattctgatgccagggcaactgccaaatgattctatgcctttgcaccagagtgcaactcaatcttctatttcgcacccaagagccagtgttgtcagatcatcatattcagcaatgttaggatacgctgctaacccaattgattctgtgtctagccatgaggggcattttatggctgctccctttatttctcagtcgtcgaatgctgaaatgctccagtctttatgtaataataatacccatgggggacacactgtgccaacctttttcccagctcctgcctgtggcgcgccagattacatggatactataactgtccctgataatcacacccagagcggctcctctactgttacatctgatgctgctaaacaaaatgaatggtgggcagatataatgaatgatgactggaaagatattctagatgcaacagctactgattctcagtcaaaggtatgtaactgcaataccataaagagtaaagttgtatccctttcttgtgttctggaagtttagaaatacacctatttattttaacatgttgacgaaagtttctaacactataatctattgagagtattttgacatcatcctactggtaatagtggtaccatctgcctacacgctaacccggttactaatttatatgatcgtgattaattttagagaaattttgcctttccagcaacatacttctgtaaccatggcggtatttttttcccttattacacaagggcattttgttagtttatctattcatttattgaatgctcgaaacttgtgtgagatgtcatttgttaaagtgattacctgtacaagagcaatgattacttgttccttggcttgaagagattgtggctgttggtagattaaatatttgattcaatgtgttaaaaatcctgtaacgaattgttcatgttcttgacataggctgctcctggaaattctaagcaatgtatactgcatcttacctttaacgcatttttttttgtccctgatgctatagatagcgctccttatgtttctaccctggtcagaatgctaaatatttatggatctcttttgttacagtccatggcccaaccttccaattctgctgcatcacagcctgctttcaatcagtcaacttcatcccatagtggcgatatttgtcctgtcacaagtcctcctcccaacaacagcaatgcctctgcaagtaaacaacggatgagatggaccccggaattgcatgaatcttttgtccatgctgtaaataagcttggtggtagtgaaagtatgtcctccgtgtcgtaaataccactcaagtggttttctcttatatatacgaatcctattctggcatagtctaatagTtttttttttttaaaaaaaaaaaaccttcagaagctactccaaaaggtgtgctcaagcttatgaaagttgatggtttgacaatctatcatgttaagagtcatctgcaggttctttttttaatctttctaaatgacatatttgctgaaaggagacttcagttttgactttctttatctgcacttatttttactgcagaagtaccgcacagctcgctacaagccagacctatcagaaggtttatatcaattgggttcctctctgacttgcattttatttatacatattcttacatacgggaactcatttttcatggcaataacttttttttttagaacttcatggcaataacttaagtacaattttcatgataatggcaagggctgtgaatttatttgtaaaagcatattttcatgatgaaatattaaatacttagtgtaagatcccttgttgcaaaatagcacgcatgcaaccatattctagtttatgtgagttgttaagacaactctgaccttttcttaactcatcatgcaggtaaaacacaagaagggaaaactaccgatgagttgtctttggacctgaaagcgtgagtggatattattattccatcgtctctcctgtttcattgtacttttggtacacttcacatggcgctaactaataagtagggtactgtgtggtttacaaatcaacatgcatcaaagttcagatcaagagcgtaggcatgactggatggcagattgcattaccgactaaagtaaataattgccttgagaaaaagttggtcgcacatatatatttgtgattcacttgctagcatggtttcaaaataagagtagggattcgcctactagtatggttcaaatctacagttagctcatatagcacaatagaagatatatccaTtttacttcaaattatgtttaggagttaccattatgcattattgagggaatggtggtatttcatgttcatttttctgttggatcagtaagtgcaccatgttcttcccagtcaccagtactagatacccttgcattatgttgttttgcttatgtaggagcatggatcttactgaagcactgcgccttcagatggaagttcagaagcgccttcatgaacaactcgaggtactaattcaaaagcatgtgcactgactctaaatttggttgaaataggctcatgccaaatgggcaaatggcaccttaataaactaaaagaggcatgcaacaattgctacccttttggggatacaaatatgagactcagaaatgttcctttcgacactagtttgtggcaatgaacaaaattgtgactgcaggaatgtggcatgctacaattgcactggtcttaataatataggggtaggacatgctcatatacttcaaattaaattcccatgacctgaagcacatttgattgctctattgcagattcagaggaaattgcagcttcgaattgaagaacaagggaaatatctgcagaagatgtttgaaaagcaatgtaaatccagcacacagagtgtgcaggatccatcgtctggagatacagcaactccatctgagccaagcaattctgtagacaaggacagtgaggctgccttggacccaaacagaataggagacaaccaccctaaaaattctaccaatgtaggtgccaacctgaaaactgcagcaaccgagtcccctgattccccagtaattgcaactgatggatcggagctCccccaagagaagcgtcgtagagtgcatgaatcttgacagttaactcatctgaatgtagagtgcattcagattatagctgttctgcccatgtacttggtaaaagaaaaatggttccatctatattggctgaaattctagtgctgatccaagtctattgagctgaactatttaaatggaacataaaaaagcctaatagagaaggggaactgtttggtgtccgcttgtattataattcagtagcaataactcaaatttatctccggtactatgaaataaggagaatttgagatctagccatcttcctgggtacaatttttatttcagggagtcagttgtaaaaggctacggaactccctcttcctccttgcagctcagaagatattgagctaggtactgaaatgtcccgggttactggtatctcttgaatgtgaaccaatggttttttttttttt
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| CDS seq | atgtcatcctccttgcctattctaccgaaatctttgaaagatatcccaagatcccataatacccagaatattctgatgccagggcaactgccaaatgattctatgcctttgcaccagagtgcaactcaatcttctatttcgcacccaagagccagtgttgtcagatcatcatattcagcaatgttaggatacgctgctaacccaattgattctgtgtctagccatgaggggcattttatggctgctccctttatttctcagtcgtcgaatgctgaaatgctccagtctttatgtaataataatacccatgggggacacactgtgccaacctttttcccagctcctgcctgtggcgcgccagattacatggatactataactgtccctgataatcacacccagagcggctcctctactgttacatctgatgctgctaaacaaaatgaatggtgggcagatataatgaatgatgactggaaagatattctagatgcaacagctactgattctcagtcaaagtccatggcccaaccttccaattctgctgcatcacagcctgctttcaatcagtcaacttcatcccatagtggcgatatttgtcctgtcacaagtcctcctcccaacaacagcaatgcctctgcaagtaaacaacggatgagatggaccccggaattgcatgaatcttttgtccatgctgtaaataagcttggtggtagtgaaaaagctactccaaaaggtgtgctcaagcttatgaaagttgatggtttgacaatctatcatgttaagagtcatctgcagaagtaccgcacagctcgctacaagccagacctatcagaaggtaaaacacaagaagggaaaactaccgatgagttgtctttggacctgaaagcgagcatggatcttactgaagcactgcgccttcagatggaagttcagaagcgccttcatgaacaactcgagattcagaggaaattgcagcttcgaattgaagaacaagggaaatatctgcagaagatgtttgaaaagcaatgtaaatccagcacacagagtgtgcaggatccatcgtctggagatacagcaactccatctgagccaagcaattctgtagacaaggacagtgaggctgccttggacccaaacagaataggagacaaccaccctaaaaattctaccaatgtaggtgccaacctgaaaactgcagcaaccgagtcccctgattccccagtaattgcaactgatggatcggagctCccccaagagaagcgtcgtagagtgcatgaatcttga
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| Protein seq | MSSSLPILPKSLKDIPRSHNTQNILMPGQLPNDSMPLHQSATQSSISHPRASVVRSSYSAMLGYAANPIDSVSSHEGHFMAAPFISQSSNAEMLQSLCNNNTHGGHTVPTFFPAPACGAPDYMDTITVPDNHTQSGSSTVTSDAAKQNEWWADIMNDDWKDILDATATDSQSKSMAQPSNSAASQPAFNQSTSSHSGDICPVTSPPPNNSNASASKQRMRWTPELHESFVHAVNKLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYRTARYKPDLSEGKTQEGKTTDELSLDLKASMDLTEALRLQMEVQKRLHEQLEIQRKLQLRIEEQGKYLQKMFEKQCKSSTQSVQDPSSGDTATPSEPSNSVDKDSEAALDPNRIGDNHPKNSTNVGANLKTAATESPDSPVIATDGSELPQEKRRRVHES |
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| Function | Protein PHOSPHATE STARVATION RESPONSE 1 [UniProtKB/Swiss-Prot:B8ANX9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_03g0016070 | OsLaMu_03g0016070.01 | Chr03 | 12435076 | 12440138 | + | NAM | ||
| CDS seq | atgtcatcctccttgcctattctaccgaaatctttgaaagatatcccaagatcccataatacccagaatattctgatgccagggcaactgccaaatgattctatgcctttgcaccagagtgcaactcaatcttctatttcgcacccaagagccagtgttgtcagatcatcatattcagcaatgttaggatacgctgctaacccaattgattctgtgtctagccatgaggggcattttatggctgctccctttatttctcagtcgtcgaatgctgaaatgctccagtctttatgtaataataatacccatgggggacacactgtgccaacctttttcccagctcctgcctgtggcgcgccagattacatggatactataactgtccctgataatcacacccagagcggctcctctactgttacatctgatgctgctaaacaaaatgaatggtgggcagatataatgaatgatgactggaaagatattctagatgcaacagctactgattctcagtcaaagtccatggcccaaccttccaattctgctgcatcacagcctgctttcaatcagtcaacttcatcccatagtggcgatatttgtcctgtcacaagtcctcctcccaacaacagcaatgcctctgcaagtaaacaacggatgagatggaccccggaattgcatgaatcttttgtccatgctgtaaataagcttggtggtagtgaaaaagctactccaaaaggtgtgctcaagcttatgaaagttgatggtttgacaatctatcatgttaagagtcatctgcagaagtaccgcacagctcgctacaagccagacctatcagaaggtaaaacacaagaagggaaaactaccgatgagttgtctttggacctgaaagcgagcatggatcttactgaagcactgcgccttcagatggaagttcagaagcgccttcatgaacaactcgagattcagaggaaattgcagcttcgaattgaagaacaagggaaatatctgcagaagatgtttgaaaagcaatgtaaatccagcacacagagtgtgcaggatccatcgtctggagatacagcaactccatctgagccaagcaattctgtagacaaggacagtgaggctgccttggacccaaacagaataggagacaaccaccctaaaaattctaccaatgtaggtgccaacctgaaaactgcagcaaccgagtcccctgattccccagtaattgcaactgatggatcggagctCccccaagagaagcgtcgtagagtgcatgaatcttga
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| Protein seq | MSSSLPILPKSLKDIPRSHNTQNILMPGQLPNDSMPLHQSATQSSISHPRASVVRSSYSAMLGYAANPIDSVSSHEGHFMAAPFISQSSNAEMLQSLCNNNTHGGHTVPTFFPAPACGAPDYMDTITVPDNHTQSGSSTVTSDAAKQNEWWADIMNDDWKDILDATATDSQSKSMAQPSNSAASQPAFNQSTSSHSGDICPVTSPPPNNSNASASKQRMRWTPELHESFVHAVNKLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYRTARYKPDLSEGKTQEGKTTDELSLDLKASMDLTEALRLQMEVQKRLHEQLEIQRKLQLRIEEQGKYLQKMFEKQCKSSTQSVQDPSSGDTATPSEPSNSVDKDSEAALDPNRIGDNHPKNSTNVGANLKTAATESPDSPVIATDGSELPQEKRRRVHES
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.732656 | 6.139492 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0329900 | RBH | 5.398429 | 4.823042 | 12.809964 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g21240 | RBH | 3.365671 | 3.054770 | 3.056243 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0329900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0016450 | RBH | 1.763134 | 39.076862 | 12.057888 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0016290 | RBH | 0.512337 | 2.354441 | 6.416510 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0016310 | RBH | 2.895109 | 11.624200 | 17.876617 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0016300 | RBH | 0.547548 | 0.442841 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0016080 | RBH | 14.802753 | 10.408786 | 30.854733 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0200700 | RBH | 6.413896 | 19.603341 | 17.510289 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0015960 | RBH | 0.658497 | 1.093888 | 2.870842 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0204900 | RBH | 7.438306 | 19.221241 | 17.323768 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0016220 | RBH | 0.742411 | 0.265404 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0016230 | RBH | 1.645792 | 16.472391 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0016270 | RBH | 11.520803 | 10.947546 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0016150 | RBH | 1.902912 | 1.724196 | 3.378527 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027810 | SBH | 0.225031 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G016030 | RBH | 0.881509 | 0.816739 | 4.478184 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0015950 | RBH | 1.892544 | 19.748211 | 14.081576 |
