Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_02g0028560 | OGI:02078600 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr02:28791189-28792459 | ||||||||
| Gene Symbol | DHS, _ | ||||||||||
| DNA seq | agttttgcaacgactagctaggagcttctgtataggacaaatgatcccagtcctacaaaatcataaagacattccagttgatacacaatcatgcatcatgatcaagtggatcaataaattatatatgcaaaatggaccagttcagctctcggttcagtgacgtactagtataaccataaaggttcaatttgcaaacattgaaaaacccaataccggaccagaaaaacagagacataccaaatgaaccgtttatcattataccactgtacacaggtgtattatctctatgacatgatttacttacatgcagtatctaatcatcgcagtaattacatgaacctcccaatgatcatgccaggtgccaggccgggccaaccaaccagctgcttgcctgcttctaattaattgttcctaccgtctaatcatcgatatattccaccgcattccgacacgtaccactctcctccagctggataatcctcggcagaaaaagaaaaaggaaacgaaagggaaagagagctttgtctccgttgattaacagcagcagtaagctagcttaggctgtgaaatggcgcgactgccctcccacccaaccgatcccgtgtcgcgtcgcggtcgcgcgggccaaatattgattcaccaaacgacgcccgtgaggcgggtggcgaggcggcccagtcgcccgcgcgggccggcggcggggcgcgcgcgcggcagcagggtggagcggcacagcgggcacgtcaaccggccgaggtcgatccaccggtcgatgcagccgcggtggaacgcgtgcgcgcagttgcccagccgccgcaccacgtcatccgcctccagcttctccaggcacacgatgcaccccgccaccgcctcgtcgtcgtcgcagccatgacagccgtgctccgaggccgcgagcagctgggcgaactcgaggggcgggaggcggtccttcacctcgtcgggcagcggggcgtcgacggcagccgggcggcccgatcgctccgggtggtggcagatcccgacgacgaagagcatcagctggagggcctccctgatggcggcgaggagcttggccaaggcgatgagcggcttggggatcgccatgcagtagcacaccagagggaaccccatgatcgccgctgtatcgagcttgctacgcacagttggcaatactactatacaccgagtcgccgaacgccgatggatgcacggaagcagagactgcggcgaaagagagtcgtggaaagcaaagggggaggatggtgacgagt
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| CDS seq | atggggttccctctggtgtgctactgcatggcgatccccaagccgctcatcgccttggccaagctcctcgccgccatcagggaggccctccagctgatgctcttcgtcgtcgggatctgccaccacccggagcgatcgggccgcccggctgccgtcgacgccccgctgcccgacgaggtgaaggaccgcctcccgcccctcgagttcgcccagctgctcgcggcctcggagcacggctgtcatggctgcgacgacgacgaggcggtggcggggtgcatcgtgtgcctggagaagctggaggcggatgacgtggtgcggcggctgggcaactgcgcgcacgcgttccaccgcggctgcatcgaccggtggatcgacctcggccggttgacgtgcccgctgtgccgctccaccctgctgccgcgcgcgcgccccgccgccggcccgcgcgggcgactgggccgcctcgccacccgcctcacgggcgtcgtttggtga
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| Protein seq | MGFPLVCYCMAIPKPLIALAKLLAAIREALQLMLFVVGICHHPERSGRPAAVDAPLPDEVKDRLPPLEFAQLLAASEHGCHGCDDDEAVAGCIVCLEKLEADDVVRRLGNCAHAFHRGCIDRWIDLGRLTCPLCRSTLLPRARPAAGPRGRLGRLATRLTGVVW |
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| Function | Brassinosteroid-responsive RING protein 1 [UniProtKB/Swiss-Prot:Q9XF92] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_02g0028560 | OsLaMu_02g0028560.01 | Chr02 | 28791189 | 28792459 | - | NAM | ||
| CDS seq | atggggttccctctggtgtgctactgcatggcgatccccaagccgctcatcgccttggccaagctcctcgccgccatcagggaggccctccagctgatgctcttcgtcgtcgggatctgccaccacccggagcgatcgggccgcccggctgccgtcgacgccccgctgcccgacgaggtgaaggaccgcctcccgcccctcgagttcgcccagctgctcgcggcctcggagcacggctgtcatggctgcgacgacgacgaggcggtggcggggtgcatcgtgtgcctggagaagctggaggcggatgacgtggtgcggcggctgggcaactgcgcgcacgcgttccaccgcggctgcatcgaccggtggatcgacctcggccggttgacgtgcccgctgtgccgctccaccctgctgccgcgcgcgcgccccgccgccggcccgcgcgggcgactgggccgcctcgccacccgcctcacgggcgtcgtttggtga
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| Protein seq | MGFPLVCYCMAIPKPLIALAKLLAAIREALQLMLFVVGICHHPERSGRPAAVDAPLPDEVKDRLPPLEFAQLLAASEHGCHGCDDDEAVAGCIVCLEKLEADDVVRRLGNCAHAFHRGCIDRWIDLGRLTCPLCRSTLLPRARPAAGPRGRLGRLATRLTGVVW |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.092892 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0682300 | RBH | 0.234979 | 0.0 | 4.590744 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g45780 | RBH | 0.129594 | 0.0 | 0.963763 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0682300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0029160 | RBH | 0.0 | 0.0 | 0.165457 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0029220 | RBH | 0.101074 | 0.0 | 1.875139 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0029090 | RBH | 0.331350 | 0.0 | 3.641312 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0028680 | RBH | 0.0 | 0.046410 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0028860 | RBH | 0.0 | 2.716832 | 1.390461 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0452500 | RBH | 2.173047 | 121.7759625 | 24.523302 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0028660 | RBH | 0.0 | 0.0 | 1.061820 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0480400 | RBH | 2.610842 | 120.2616235 | 0.1014385 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0028990 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0028720 | RBH | 0.0 | 10.791590 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0029010 | RBH | 0.0 | 9.935865 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0028880 | RBH | 0.0 | 0.0 | 0.724499 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0024340 | RBH | 0.0 | 2.835722 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G029130 | RBH | 0.0 | 0.0 | 0.790406 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0028900 | RBH | 0.0 | 0.0 | 4.699380 |
