Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_02g0024590 | OGI:02069760 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr02:25482672-25484817 | ||||||||
| Gene Symbol | OsMPS | ||||||||||
| DNA seq | gaatgaattctcaccatgatgtatagaataatttgcctggaagtacatggcctcgaatggacaactgtcaaatttcaagagctcagatgcactcttaacacctgattttcccccctgcagtcctcctatattctttctccaaaagcaaaacaaagaaaaaaactcttcccttcctttttcTcctagaaaaagcgctctcaaatgagccaaacatgccatcgaggcaagcgagctactcaaagtggagtatagttggtgttgcatccttatccaccaacacttcgtgtacacaaaatggcctctcgctctcacctgcatagtcactacgtgtgccctcctccacacgcacaggctgctgtgtgctatcagtttggatggatgcacaagaccaaaaggaacatctacttgtagagtgtgtaggcttgtagctatagctagctagcaatttagtaatcgttaagctatagctagtagaaagcgaggccttgatcctgtagcggagggaagctaccccagcagcagccggcgccggcggcgcagtcgatcatcatgtcgtgcaccacgtcgtcgaggttccacaggctgccccacgtggcggcgccgccgtcgagctcctcgcttgagccctcgctcgtcgaggcggcagcgccagcgctggccgccacggcgccgcactcgccgccgccgctgccgaggaggtcgtcgtaggaatagggcgacatgtctCccgggtggtagtacagcaggtcgtccatgtccggcgccatctcctgcattatctggagctcgccgtcgtgggtcagcgaggtggcggctggtggcgcgacctccgcaaggttgtcgtccaccaccgcgctggtggcgtcgtcgtcttggccgagctgctgctgctggccggtttgcatcagctggctctgctgctgcatctcgcggcgctgcttcaggaaccgagccctcgcgcgctcgatgttcttggacggcttgcccttcttgaagtgcgtcctccagtagttcttgatctcgttgtccgtcctgccaggcaggctacgcgcgatcgtcgaccacctacaccgccacagagaataatgcgatcgatcgaatcagttacacattcatggcaaaattaaacgcgatcgagctcgatcacgaaaggatttgcaaatgggttgttacctgtttccccacaaggcatgaagctcgagtatgacgctctcctcctgtggcgtgatcttgcctcgcttgaggtcaggtctcaggtagttcacccaacgaagcctgcagctcttgccacttctcttcagacctgcaaagcacgacatacacaggctcagtactgtaagatacatagcatcagacagaattagctgacgtacatatgcagaaaaagtaacatgtacatgacacacctaccactcccatttgtacttaactaagaaagtaaagcttggttaatgctaatcatctgaagctaactctcagctaggaaaaggatttccacggttacagctaggaaaaggttctgacgaatttacacgcgcgtgcatgcagttcatacgcggtttaattaattaatgcatgtgctagagcaagcaccaaatgcctattctccgaaaacacgatcgtaccaaatgccgcaattggaatcaaatcatgcaacttgacaatcatgggcgacatatgcaaccttaaacatgtactaattgcatgtttgactgccccaacgtgcaatttaacaaaccaaatgcaaactgatgctactagctataatttcttcctaaaaggctatatatatcgagcttcttgatttgggacaacgtgcgagagaacatcgaaatggtcacgaacatgcaagaacaccactcaatcagtagctatagcacctacctgtgatcttggcgacagaattccacctcccttcgccgtgctgcatcacgtactcaaccagcagcttgtcttcctgcgctgtccatggccctttcctccaccctccctcctcccttccccaagcgaactgctgcccttccattgatttacacagacaaatctcttcgtctatctcttgatctctctctctcttcTtttgcttcctccctcctgagctgtctccgctcgcagtgatgagctagcgagtgatgaagcgatcgat
More
|
||||||||||
| CDS seq | atggaagggcagcagttcgcttggggaagggaggagggagggtggaggaaagggccatggacagcgcaggaagacaagctgctggttgagtacgtgatgcagcacggcgaagggaggtggaattctgtcgccaagatcacaggtctgaagagaagtggcaagagctgcaggcttcgttgggtgaactacctgagacctgacctcaagcgaggcaagatcacgccacaggaggagagcgtcatactcgagcttcatgccttgtggggaaacaggtggtcgacgatcgcgcgtagcctgcctggcaggacggacaacgagatcaagaactactggaggacgcacttcaagaagggcaagccgtccaagaacatcgagcgcgcgagggctcggttcctgaagcagcgccgcgagatgcagcagcagagccagctgatgcaaaccggccagcagcagcagctcggccaagacgacgacgccaccagcgcggtggtggacgacaaccttgcggaggtcgcgccaccagccgccacctcgctgacccacgacggcgagctccagataatgcaggagatggcgccggacatggacgacctgctgtactaccacccggGagacatgtcgccctattcctacgacgacctcctcggcagcggcggcggcgagtgcggcgccgtggcggccagcgctggcgctgccgcctcgacgagcgagggctcaagcgaggagctcgacggcggcgccgccacgtggggcagcctgtggaacctcgacgacgtggtgcacgacatgatgatcgactgcgccgccggcgccggctgctgctggggtagcttccctccgctacaggatcaaggcctcgctttctactag
More
|
||||||||||
| Protein seq | MEGQQFAWGREEGGWRKGPWTAQEDKLLVEYVMQHGEGRWNSVAKITGLKRSGKSCRLRWVNYLRPDLKRGKITPQEESVILELHALWGNRWSTIARSLPGRTDNEIKNYWRTHFKKGKPSKNIERARARFLKQRREMQQQSQLMQTGQQQQLGQDDDATSAVVDDNLAEVAPPAATSLTHDGELQIMQEMAPDMDDLLYYHPGDMSPYSYDDLLGSGGGECGAVAASAGAAASTSEGSSEELDGGAATWGSLWNLDDVVHDMMIDCAAGAGCCWGSFPPLQDQGLAFY |
||||||||||
| Function | Transcription factor MYB62 [UniProtKB/Swiss-Prot:Q9C9G7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_02g0024590 | OsLaMu_02g0024590.01 | Chr02 | 25482672 | 25484817 | - | NAM | ||
| CDS seq | atggaagggcagcagttcgcttggggaagggaggagggagggtggaggaaagggccatggacagcgcaggaagacaagctgctggttgagtacgtgatgcagcacggcgaagggaggtggaattctgtcgccaagatcacaggtctgaagagaagtggcaagagctgcaggcttcgttgggtgaactacctgagacctgacctcaagcgaggcaagatcacgccacaggaggagagcgtcatactcgagcttcatgccttgtggggaaacaggtggtcgacgatcgcgcgtagcctgcctggcaggacggacaacgagatcaagaactactggaggacgcacttcaagaagggcaagccgtccaagaacatcgagcgcgcgagggctcggttcctgaagcagcgccgcgagatgcagcagcagagccagctgatgcaaaccggccagcagcagcagctcggccaagacgacgacgccaccagcgcggtggtggacgacaaccttgcggaggtcgcgccaccagccgccacctcgctgacccacgacggcgagctccagataatgcaggagatggcgccggacatggacgacctgctgtactaccacccggGagacatgtcgccctattcctacgacgacctcctcggcagcggcggcggcgagtgcggcgccgtggcggccagcgctggcgctgccgcctcgacgagcgagggctcaagcgaggagctcgacggcggcgccgccacgtggggcagcctgtggaacctcgacgacgtggtgcacgacatgatgatcgactgcgccgccggcgccggctgctgctggggtagcttccctccgctacaggatcaaggcctcgctttctactag
More
|
|||||||
| Protein seq | MEGQQFAWGREEGGWRKGPWTAQEDKLLVEYVMQHGEGRWNSVAKITGLKRSGKSCRLRWVNYLRPDLKRGKITPQEESVILELHALWGNRWSTIARSLPGRTDNEIKNYWRTHFKKGKPSKNIERARARFLKQRREMQQQSQLMQTGQQQQLGQDDDATSAVVDDNLAEVAPPAATSLTHDGELQIMQEMAPDMDDLLYYHPGDMSPYSYDDLLGSGGGECGAVAASAGAAASTSEGSSEELDGGAATWGSLWNLDDVVHDMMIDCAAGAGCCWGSFPPLQDQGLAFY
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0618400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g40530 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0618400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0025260 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0025420 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0025250 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0024860 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0024960 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0399700 | RBH | 0.3218515 | 34.503098 | 0.551139 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0024810 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0429300 | RBH | 0.543539 | 32.112584 | 0.069919 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0025030 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0024830 | RBH | 0.0 | 2.070622 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0025140 | RBH | 0.0 | 8.655579 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0025060 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0019640 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G025250 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0025110 | RBH | 0.0 | 0.0 | 0.0 |
