Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_02g0023820 | OGI:02067790 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr02:24666975-24667700 | ||||||||
| Gene Symbol | OsPP2C21, PP2C21, OsPP31 | ||||||||||
| DNA seq | ctacgcgattccgctgcgcttgtgacttgtgaaaattgttgtggttgcgaagcaaaagtgggtgagaggagccaaagccttgcatgcaagaggaggtggggcacaaaaagtagtaaaaccaacccaaagcttccgtcttcggcccgagcgggcgcatctcgtccgttggattggcccaacgtggctgctgcgcctgatccgacggcccaggtgcgcccctcgtgctgcccgtgcacctgggcccactcgcgcgctgccttgtggccttcgaggagggattcctcctcctcctcctccgccgccgccgtagccGgggtattggtcggcgccgccgagccgctcgggagtacaggcggaggagccccgaggagctgcattgaggcccacgcgccgccgggctcgccgtcgtcggccgcttagctccaccccCttcgtcttctgctccggccgccgcacaaccacagcctcacccctcccctccggggtccaggccagcgcctcctcgcgctcgcgggctcgccgcccgagctgtgcgccacgccacgagagcatcggagcacgcggcagcggcggaagaaggaatccgggtcggccatgtcggcgagggcgaaggtggccgatgcgggaggtggagcggcggcggcggcggttgcaaggcagcacgcggtgtgcgacggcgcgtggagcaggagcaggagcaggagcaggaggaggaggaggagacat
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| CDS seq | atgtctcctcctcctcctcctgctcctgctcctgctcctgctccacgcgccgtcgcacaccgcgtgctgccttgcaaccgccgccgccgccgctccacctcccgcatcggccaccttcgccctcgccgacatggccgacccggattccttcttccgccgctgccgcgtgctccgatgctctcgtggcgtggcgcacagctcgggcggcgagcccgcgagcgcgaggaggcgctggcctggaccccggaggggaggggtgaggctgtggttgtgcggcggccggagcagaagacgaaGggggtggagctaagcggccgacgacggcgagcccggcggcgcgtgggcctcaatgcagctcctcggggctcctccgcctgtactcccgagcggctcggcggcgccgaccaatacccCggctacggcggcggcggaggaggaggaggaggaatccctcctcgaaggccacaaggcagcgcgcgagtgggcccaggtgcacgggcagcacgaggggcgcacctgggccgtcggatcaggcgcagcagccacgttgggccaatccaacggacgagatgcgcccgctcgggccgaagacggaagctttgggttggttttactactttttgtgccccacctcctcttgcatgcaaggctttggctcctctcacccacttttgcttcgcaaccacaacaattttcacaagtcacaagcgcagcggaatcgcgtag
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| Protein seq | MSPPPPPAPAPAPAPRAVAHRVLPCNRRRRRSTSRIGHLRPRRHGRPGFLLPPLPRAPMLSWRGAQLGRRAREREEALAWTPEGRGEAVVVRRPEQKTKGVELSGRRRRARRRVGLNAAPRGSSACTPERLGGADQYPGYGGGGGGGGGIPPRRPQGSARVGPGARAARGAHLGRRIRRSSHVGPIQRTRCARSGRRRKLWVGFTTFCAPPPLACKALAPLTHFCFATTTIFTSHKRSGIA |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_02g0023820 | OsLaMu_02g0023820.01 | Chr02 | 24666975 | 24667700 | - | NAM | ||
| CDS seq | atgtctcctcctcctcctcctgctcctgctcctgctcctgctccacgcgccgtcgcacaccgcgtgctgccttgcaaccgccgccgccgccgctccacctcccgcatcggccaccttcgccctcgccgacatggccgacccggattccttcttccgccgctgccgcgtgctccgatgctctcgtggcgtggcgcacagctcgggcggcgagcccgcgagcgcgaggaggcgctggcctggaccccggaggggaggggtgaggctgtggttgtgcggcggccggagcagaagacgaaGggggtggagctaagcggccgacgacggcgagcccggcggcgcgtgggcctcaatgcagctcctcggggctcctccgcctgtactcccgagcggctcggcggcgccgaccaatacccCggctacggcggcggcggaggaggaggaggaggaatccctcctcgaaggccacaaggcagcgcgcgagtgggcccaggtgcacgggcagcacgaggggcgcacctgggccgtcggatcaggcgcagcagccacgttgggccaatccaacggacgagatgcgcccgctcgggccgaagacggaagctttgggttggttttactactttttgtgccccacctcctcttgcatgcaaggctttggctcctctcacccacttttgcttcgcaaccacaacaattttcacaagtcacaagcgcagcggaatcgcgtag
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| Protein seq | MSPPPPPAPAPAPAPRAVAHRVLPCNRRRRRSTSRIGHLRPRRHGRPGFLLPPLPRAPMLSWRGAQLGRRAREREEALAWTPEGRGEAVVVRRPEQKTKGVELSGRRRRARRRVGLNAAPRGSSACTPERLGGADQYPGYGGGGGGGGGIPPRRPQGSARVGPGARAARGAHLGRRIRRSSHVGPIQRTRCARSGRRRKLWVGFTTFCAPPPLACKALAPLTHFCFATTTIFTSHKRSGIA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g39410 | RBH | 0.387721 | 0.582439 | 0.224799 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0024280 | RBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0024430 | RBH | 0.0 | 0.0 | 0.409847 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0024430 | RBH | 0.0 | 0.0 | 0.915026 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0024070 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0023990 | RBH | 0.0 | 0.0 | 2.654718 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0388700 | RBH | 1.2371055 | 2.943191 | 11.206985 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0023830 | RBH | 0.000000 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0416600 | RBH | 1.710069 | 2.458518 | 10.315714 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0024100 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0024050 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0024360 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G024240 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0024110 | RBH | 0.0 | 0.0 | 0.0 |
