Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_02g0013820 | OGI:02033700 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr02:12163783-12165175 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcactggccgccacggcgacgcttgctggCcccggcggcggcgccatcagacttgagcacctgcgtccccagcttccgctcgtactccagcgcctgcctcgcctcctccagctccctcgccttggcgctccccagctgcgccttcaggcggctgatctctccctgcgccttggccagagccttgtccttcgcctgcagctctgaccgaagcacgccaccgccggtgctgacgccatcgcccagcaccttcctcttcttcccggccgccaccgacgaaccccgtgaagcttccgtccctggaagcaagaaagaagaaaacaatcgagcaattgaggaatctgcaccatccgatgtacgttttgttggtggcatttgatcgtccgtccgtacctcccagacatgccggggcgctgctgatcttggcggcgacgaggttgctctccgagaggtaggtcttgaggtcgacgatgccttggccctgcgtgagccgccgcgccacggcggcctccctctcggtgagcgccgggtcgctcgtggcctccttggacggggttccccagcgcacggggcagcgccacggcgcggcgggcggcggcgagacgaagaggaactcctccttccacgccttgacggaggacgggaggcccgtgaacagcgcggggacgctctccctggcgcggaaggagtaccaccccttccccttgggcagcggcgccagggtgaagaagtggcggaacaccgggagcgacggcgcgccgacgccgcggaagtggcagagcacggcgaacccggccaggacgcgccacccgttgggcgccagctgcgacggcgcgatgccgaagtgggccagcgcgtcgctgacgaacgggtgcagcggcaggcgcatccccgccgcgaacgcctgcgcgtacacgcagatcggcaccgccgccgccgccgcgccacccccgcgcccgccacgcggagtcaccggaggcggcgcgcacgcggtctggttggCcccggcggggtgcaggccgaacccctcggggacgctgtacctggcgcggatcccggcgagcgactcctgcgtgcggagcgtggacctgaagggctccaccaccggccacgagagcgccgtggtctcctccgcgcggtcgtggacaccccttcccactctcgggcgaggcagcggcggctgcttcaccaccaccgccggcttcacatcctcgccgccgccgtaggaggccgcagcgcgggcgtcgtaacgccactgctgcgtcaccgccggcttgacgtcgccctcgtcgtcgtcgccgtcgaagtaggtcgacgcgtggtggacgacgtggcggtggtggtggtgggtggaggaggaggaggaggaggaggagtggaaccacgacgacgacat
More
|
||||||||||
| CDS seq | atgtcgtcgtcgtggttccactcctcctcctcctcctcctcctccacccaccaccaccaccgccacgtcgtccaccacgcgtcgacctacttcgacggcgacgacgacgagggcgacgtcaagccggcggtgacgcagcagtggcgttacgacgcccgcgctgcggcctcctacggcggcggcgaggatgtgaagccggcggtggtggtgaagcagccgccgctgcctcgcccgagagtgggaaggggtgtccacgaccgcgcggaggagaccacggcgctctcgtggccggtggtggagcccttcaggtccacgctccgcacgcaggagtcgctcgccgggatccgcgccaggtacagcgtccccgaggggttcggcctgcaccccgccgggGccaaccagaccgcggacggaagcttcacggggttcgtcggtggcggccgggaagaagaggaagagctgcaggcgaaggacaaggctctggccaaggcgcagggagagatcagccgcctgaaggcgcagctggggagcgccaaggcgagggagctggaggaggcgaggcaggcgctggagtacgagcggaagctggggacgcaggtgctcaagtctgatggcgccgccgccgggGccagcaagcgtcgccgtggcggccagtga
More
|
||||||||||
| Protein seq | MSSSWFHSSSSSSSSTHHHHRHVVHHASTYFDGDDDEGDVKPAVTQQWRYDARAAASYGGGEDVKPAVVVKQPPLPRPRVGRGVHDRAEETTALSWPVVEPFRSTLRTQESLAGIRARYSVPEGFGLHPAGANQTADGSFTGFVGGGREEEEELQAKDKALAKAQGEISRLKAQLGSAKARELEEARQALEYERKLGTQVLKSDGAAAGASKRRRGGQ |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_02g0013820 | OsLaMu_02g0013820.01 | Chr02 | 12163783 | 12165175 | - | NAM | ||
| CDS seq | atgtcgtcgtcgtggttccactcctcctcctcctcctcctcctccacccaccaccaccaccgccacgtcgtccaccacgcgtcgacctacttcgacggcgacgacgacgagggcgacgtcaagccggcggtgacgcagcagtggcgttacgacgcccgcgctgcggcctcctacggcggcggcgaggatgtgaagccggcggtggtggtgaagcagccgccgctgcctcgcccgagagtgggaaggggtgtccacgaccgcgcggaggagaccacggcgctctcgtggccggtggtggagcccttcaggtccacgctccgcacgcaggagtcgctcgccgggatccgcgccaggtacagcgtccccgaggggttcggcctgcaccccgccgggGccaaccagaccgcggacggaagcttcacggggttcgtcggtggcggccgggaagaagaggaagagctgcaggcgaaggacaaggctctggccaaggcgcagggagagatcagccgcctgaaggcgcagctggggagcgccaaggcgagggagctggaggaggcgaggcaggcgctggagtacgagcggaagctggggacgcaggtgctcaagtctgatggcgccgccgccgggGccagcaagcgtcgccgtggcggccagtga
More
|
|||||||
| Protein seq | MSSSWFHSSSSSSSSTHHHHRHVVHHASTYFDGDDDEGDVKPAVTQQWRYDARAAASYGGGEDVKPAVVVKQPPLPRPRVGRGVHDRAEETTALSWPVVEPFRSTLRTQESLAGIRARYSVPEGFGLHPAGANQTADGSFTGFVGGGREEEEELQAKDKALAKAQGEISRLKAQLGSAKARELEEARQALEYERKLGTQVLKSDGAAAGASKRRRGGQ
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0307900 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g20500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0307900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0013910 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0014090 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0013910 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0013800 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0013750 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0191800 | RBH | 0.3071875 | 0.3763455 | 0.525299 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0013570 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0203700 | RBH | 0.1680325 | 0.390485 | 1.8175275 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0014110 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0013650 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0014200 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0014010 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G014120 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0013880 | RBH | 0.000000 | 0.0 | 0.000000 |
