Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_02g0013780 | OGI:02033610 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr02:12144748-12145550 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttaccttgcatccttcaaccattgaagacttattacggcccttcgagcagtagttaactcccaaagatgacgatatggatctctgcagcaaagatatcttatgagatgcactaaaattcccaaatattacaaaacaaaaacggtagaaaacaacagcaaatccaagggggctgtgacaggtagtgatttaaccataacaatcagtatattcatagccaaacatactgcagcttctagaacaagtttcttagtgcccattgaaaagctaaagaaaaaaaccgtatatcgcactggattcataaagaaactcctactgacatcattggtccatgtgataataacatattctgcatatcgtgcctatcttttgtttgttaactcggaatttttaccattaggaaacaaacagaaacaaatatgaatggttcagaaattgggaggtgccacgaattcagagaggaagggggagagactaccctcaatgttcagacctctgaggacccatacataatattagaaattcatgcaggataagagagtagttcgaaagatgttttaaacattgcttcagttcacaacaaggccaacacctaccttaaatccccgaatttcagaccatcctctccagcagtgacaaaggtattcacgttttccttactgatagaatgacaagagtcaaaactcAaaaattatcttttggaatagaccagagtaacagtacaactggctacctcacagatggtgcccacgacacggttctgatgggagcagattcagcagttacacacataaaaggttttgaa
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| CDS seq | atgtgtgtaactgctgaatctgctcccatcagaaccgtgtcgtgggcaccatctgtgagtaaggaaaacgtgaatacctttgtcactgctggagaggatggtctgaaattcggggatttaagagatccatatcgtcatctttgggagttaactactgctcgaagggccgtaataagtcttcaatggttgaaggatgcaaggtaa |
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| Protein seq | MCVTAESAPIRTVSWAPSVSKENVNTFVTAGEDGLKFGDLRDPYRHLWELTTARRAVISLQWLKDAR |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_02g0013780 | OsLaMu_02g0013780.01 | Chr02 | 12144748 | 12145550 | - | NAM | ||
| CDS seq | atgtgtgtaactgctgaatctgctcccatcagaaccgtgtcgtgggcaccatctgtgagtaaggaaaacgtgaatacctttgtcactgctggagaggatggtctgaaattcggggatttaagagatccatatcgtcatctttgggagttaactactgctcgaagggccgtaataagtcttcaatggttgaaggatgcaaggtaa
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| Protein seq | MCVTAESAPIRTVSWAPSVSKENVNTFVTAGEDGLKFGDLRDPYRHLWELTTARRAVISLQWLKDAR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0858000 | SBH | 2.567940 | 3.689713 | 2.320602 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g63910 | SBH | 3.123481 | 2.727529 | 0.535681 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0858000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0013860 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0013330 | SBH | 0.260532 | 2.008509 | 4.257549 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0013860 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0013750 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0013710 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0191200 | RBH | 0 | 0.0059585 | 0.009804 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0039490 | SBH | 0.313932 | 0.096417 | 0.886032 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0203200 | RBH | 0.0795135 | 0.319138 | 0.3190875 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0039850 | SBH | 0.246063 | 0.145316 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0039790 | SBH | 0.715119 | 0.550689 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0040030 | SBH | 3.945022 | 3.022622 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0013970 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0039880 | RBH | 0.385373 | 1.621924 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G014080 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0013840 | RBH | 0.0 | 0.0 | 0.0 |
