Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_02g0012310 | OGI:01024410 | 8/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr02:10433043-10433435 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgagtgatacggctcctaacgaggctactgttcatgttcaggatgcggcggcgacaacttgtggtgtagcttctgttggtgctcaaagtggtatattgatgggtcctagtggtgttggtattgatgctgagagcacaaagggtgcggttgctgaaactgaaacaacagatatggttggaattgcttctacttctgttttactggatccaaaatgctctaatagcaaaggtaggcacaagagtgagccaagaaaaaagaggctgatagatgtgattagaagcaagggtttggtgacatgtagtggttgtggatcccatgaccataatattcgcacttgtcccaaaaaaagagaagccaaatgcaacagaagtgatgcaggagaggaaatctag |
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| CDS seq | atgagtgatacggctcctaacgaggctactgttcatgttcaggatgcggcggcgacaacttgtggtgtagcttctgttggtgctcaaagtggtatattgatgggtcctagtggtgttggtattgatgctgagagcacaaagggtgcggttgctgaaactgaaacaacagatatggttggaattgcttctacttctgttttactggatccaaaatgctctaatagcaaaggtaggcacaagagtgagccaagaaaaaagaggctgatagatgtgattagaagcaagggtttggtgacatgtagtggttgtggatcccatgaccataatattcgcacttgtcccaaaaaaagagaagccaaatgcaacagaagtgatgcaggagaggaaatctag |
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| Protein seq | MSDTAPNEATVHVQDAAATTCGVASVGAQSGILMGPSGVGIDAESTKGAVAETETTDMVGIASTSVLLDPKCSNSKGRHKSEPRKKRLIDVIRSKGLVTCSGCGSHDHNIRTCPKKREAKCNRSDAGEEI |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_02g0012310 | OsLaMu_02g0012310.01 | Chr02 | 10433043 | 10433435 | + | NAM | ||
| CDS seq | atgagtgatacggctcctaacgaggctactgttcatgttcaggatgcggcggcgacaacttgtggtgtagcttctgttggtgctcaaagtggtatattgatgggtcctagtggtgttggtattgatgctgagagcacaaagggtgcggttgctgaaactgaaacaacagatatggttggaattgcttctacttctgttttactggatccaaaatgctctaatagcaaaggtaggcacaagagtgagccaagaaaaaagaggctgatagatgtgattagaagcaagggtttggtgacatgtagtggttgtggatcccatgaccataatattcgcacttgtcccaaaaaaagagaagccaaatgcaacagaagtgatgcaggagaggaaatctag
More
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| Protein seq | MSDTAPNEATVHVQDAAATTCGVASVGAQSGILMGPSGVGIDAESTKGAVAETETTDMVGIASTSVLLDPKCSNSKGRHKSEPRKKRLIDVIRSKGLVTCSGCGSHDHNIRTCPKKREAKCNRSDAGEEI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g08460 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0003190 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0009710 | SBH | 0.000000 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0003180 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0009160 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0012270 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0177200 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0041900 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0077800 | SBH | 0 | 0 | 0.018537 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0018880 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0042190 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0012670 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0009100 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0042250 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G018570 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0002730 | SBH | 0.0 | 0.0 | 0.0 |
