Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_01g0033730 | OGI:04041240 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr01:33692335-33692676 | ||||||||
| Gene Symbol | DUF668-10, OsDUF668-10, - | ||||||||||
| DNA seq | ctagacgcggtcgaaaatcgtgcaggaacggcgcgccacgcagcaccgcgtcccgaaccgcgtggcgctgccggcggcacggtcgaggtccgccacgacctcgccacacgcgagccagagcaggagcgactggtccgtggatgtgacgcgcgcgacgccctcggcgAGCagcgcgtccacgcggagcctcctgtcctccacgtcagacaatgagcagtagagcgacacgagccgcgacatggccgccgccacctcgaacgccaggatcttgagccctgtctcctccctggcgccgccaccgccgctgaaccgcacacgcagccacgcaggtcggtgagccat |
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| CDS seq | atggctcaccgacctgcgtggctgcgtgtgcggttcagcggcggtggcggcgccagggaggagacagggctcaagatcctggcgttcgaggtggcggcggccatgtcgcggctcgtgtcgctctactgctcattgtctgacgtggaggacaggaggctccgcgtggacgcgctGCTcgccgagggcgtcgcgcgcgtcacatccacggaccagtcgctcctgctctggctcgcgtgtggcgaggtcgtggcggacctcgaccgtgccgccggcagcgccacgcggttcgggacgcggtgctgcgtggcgcgccgttcctgcacgattttcgaccgcgtctag |
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| Protein seq | MAHRPAWLRVRFSGGGGAREETGLKILAFEVAAAMSRLVSLYCSLSDVEDRRLRVDALLAEGVARVTSTDQSLLLWLACGEVVADLDRAAGSATRFGTRCCVARRSCTIFDRV |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_01g0033730 | OsLaMu_01g0033730.01 | Chr01 | 33692335 | 33692676 | - | NAM | ||
| CDS seq | atggctcaccgacctgcgtggctgcgtgtgcggttcagcggcggtggcggcgccagggaggagacagggctcaagatcctggcgttcgaggtggcggcggccatgtcgcggctcgtgtcgctctactgctcattgtctgacgtggaggacaggaggctccgcgtggacgcgctGCTcgccgagggcgtcgcgcgcgtcacatccacggaccagtcgctcctgctctggctcgcgtgtggcgaggtcgtggcggacctcgaccgtgccgccggcagcgccacgcggttcgggacgcggtgctgcgtggcgcgccgttcctgcacgattttcgaccgcgtctag
More
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| Protein seq | MAHRPAWLRVRFSGGGGAREETGLKILAFEVAAAMSRLVSLYCSLSDVEDRRLRVDALLAEGVARVTSTDQSLLLWLACGEVVADLDRAAGSATRFGTRCCVARRSCTIFDRV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g23840 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0007910 | RBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0024900 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0008060 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0002390 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0039040 | SBH | 0.0 | 3.298816 | 0.655285 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0599800 | SBH | 0.770801 | 32.1283875 | 3.380335 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0038730 | SBH | 0.0 | 0.322487 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0597400 | SBH | 0.8942505 | 55.426714 | 0.263265 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0039080 | SBH | 0.086491 | 0.106135 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0039020 | SBH | 0.129793 | 2.684882 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0039250 | SBH | 0.0 | 14.898027 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0013990 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0009330 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G039580 | SBH | 0.0 | 0.869430 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0033840 | RBH | 0.0 | 0.0 | 0.0 |
