Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_01g0019890 | OGI:01064320 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr01:21830416-21834971 | ||||||||
| Gene Symbol | RLCK36, OsRLCK36, Gnk2RLK-2 | ||||||||||
| DNA seq | agaacaaaagcagataaagttcttcaatggagcaatgtgcaatacaaaatattttgacacgagatgacccaaaacaacaattgagaactatctaccatctacaacagacagtgtgataccattagcactagataccataataacagttgatggctcttcctttgtcaccctcatgtggtaaaaagcagggtacttaggctcaggtagggtcatactcttgctggttagcatcgcaacaacctctgacatagtgggtcgatctgcggcattctcttgcacacaaagcaaagcaatgttaatacatcgtgccatctctggtgtatgagactctattactaatgatgtatctacgagttgaagccatgtttcatctttccacatctgccatgcctacaaagataaagataaagacgaacattaagatgccatgttacatcgtgcctttcaaaatatgtaagcgatcttcatgatcttctatgactctagaagaagtgaaaaaacaaagaaacaggacttatgatgaaaacaatgccgaccatgccattcaaaactgtgtcctttccattttcgggagattaggaactcgaaccattacataTttatatgataataatacttacgtgtccaagaaggttgataaagtctccatgccgatgaaaacttgatgttctttttccactgacagtctcgagaattagcacaccgaagctgaatacatcagatttgattgagaaaaggccctcggaagcatactctggagccatataaccactgaaaggatagtatatatgtaggaaacattgaagtcactcagcagtattggcagtattatgtacagctaggagcctaggatgtatgaatttgtaagaatcttactaggtcccgacgatcctttttgtattcccttcagtatcatttgtgctaaatatttttgcaagcccaaaatctgaaattttagggttcatttcatggtccaatagaatgttgcctgctttgagatctctatgaatgatacgcaaccgagagtgcttatgcaaatatagaagtccttgtgctatcccatttattatcgcaaggcgtttattccaatctactaaagctcttcttgtttcatctacaaatcagttcaacacagatatgagatatataaacaaagtaactttgacagttagagataataaaccaaaaattatataccaaaaatgaagaaatccaagcttttatttggcaaatattcatatactagtattttctcctgtcgctgataacagcatcccaggagcctaaccaaatttgtgtgctggagcttagctatgagctgaatttcatttttgaactctgttaagccttgccctgaatgagaagcaagcctcttaactgctatctccaccccatcaggaaatcggccctagagacaagtgcaaaagagatggattagtgacacaagtgtcagtttcaattgtcttttgaaacttgactaatattacgaccaacttaatcagctaaagcagagtgagttaattgcgttttataatatgcaaattaatgaataatatgtaaaactgtttgatttgcctctatatgtagggcgtaggctcatgcttgtgttttctttcccgtctcaccttgtatacaggaccaaagcctccttgcccaagtttgttttcttctgagaaattacctgtggcctctaatacatgggaaaagtcgtaaactgtgaattctgaactccttccttctagtccccaaattagtgcttcatcttcttgcgtgttcatcttacctaaattacgagttaatgtgatactttcagttaatttagcttacacactcatacacattaattgcatatagtacatttccatgtagatagctgacctcttaggcaaatagtaaattctCcccttatatgccttgtcaatatgaaggaaacgatgacgcagataaacaatgcaagtagtggagctaccaaggcaatggccaaaactttgcttatcggctctatttagttattagtacgatgcaaatggtcagtttggttacaaagcttgaaaaatggaatgaaagaaattaaagggcatgtaataatgtgcttactcttgtgttttggcgttggtggtggcagcgaggctggctgcggtgctggacttggaacaatagcattcgacgccgacgacccggagctccacgtgggcgcgccagtgtagaacttcttcgtatcgtacctaggtaaaggctctaaccttttcagcctataaaatttaaggacttgatctaaaataggggtggctacttggctgaacttttgttcatttttgatggtggacctaaaaatattgagggttgctgtacaatagaatcccgttgggacagaatgataccggtcaggtatctggtcctgatacctttgagttatcatatcctaatagtgatacctaaccagtatcaggtgatagatcacttgcgaggtatcaggtgaaacatgttagatatcaggcgattcctaccacatatcaggtgatacttgcgaagtatcatgtaaaacctgttaggtatcaggcgattcctaccacgtatcaggtgaaacttgtcaggtatcaggtgaaacctgtcaggtatcaagtgatccttaccacgtatcaagtgatacttgtgaagtatcaggtgaaacctgtcaggtattaggaaccgggcatcgccggtggtcccaccgtccacgtctcatgccgaagcttgtcaggcggcggcatcctccacggtacatgccacgtcggagctcatcgccggcggctgcgtcctccgtcatccactcctcacgctggagctagtcgccagcgtgccgcatcctccaccatccacatcacgtcggagctcatcactagcggtcgcgtggcctgcgtcctccgtcatctacgcctcacgctggagctagtcaccagcggcagcatcctccaccccacgccgaagctcgttgcggtagtcgcgtcctccgtcatccatgccccacaccggagctcgtcgcagacggccgcatcctcctctgtccacgccaagtcggagctcgtcagcggtggccgtgtcctccttgctccacgtttatccactccggcgacagctccattcccgactgtcgcgacaacccacgtccatcagctccgatgccgagctcgcgctgctcctcaacgcggcacctctcttcgattctgcgacggcggtcaagccccgcgcgtcgccgctatcctcaactggcacgagtagttgcgctgcgtaacgatatgacgcctacggcgactgacaccacgccgcaacctcacacgaaataggctgtctcagccacaacaccgccatgaaacgaaacctggttgtggccattcttatccgtaagtgcgtgaggctgggagaggatgacgatcccgtcctgaacgctagcaatggtatccctgtattgagcatttccgaaaattttttgagaaacactaggtagggttgtgaaataaccaaaaccatactccctatttcatattattagtcatttgacttttttctaatcaaacttctttaattttgaccaaatttataaaaagatatattagtactttcacaacaaaacaaacacattatcaaactatatttgatgctagatttaatgaaactaatttcatattttagatgttaaactttttataaacttgattaaacttaataaagtttgacttaaaaaaatatcaaacgacttgtaattaatatgaaacggagggagggagggagtacctcagattacaccacagaccaagaacacgccatccttgccgcccagggaagctcgccaccggccgatcgctgaaattcgtgaggcagctgtagcatatatcttcaatcaagtctggcgcgcactgcgccaagcagtagaactcccgcggcactgcggtggtgctactgctgctcccgtcgtccatctccatgcggatcgccgcgtagtgcctcctcgtggagagaacttgccctaccacgtcggtcagcatcgtcttcaagaatccggtgaagttcgccgtcgccgtagaccggccaggtagcatgggctccgaggtgaggttcatcaggacaagcgcgccatggactatttccgaggtgttgagacggcggacggagtccatgttgaggatgtccgtgtcggagaagcggaggaggcactcgtcgtagtagatggtggcgtccttgctgcgcgggcacagctgcatcgcgcgcctgaacgcggcgtcgaagcaggagctgcaggcgggggcgtcgtcgacgtcgccgcggcagagcgcgacggcgtagaccttgtccgggtcggcgccggaggagcccctgacgaatatgccgccgccggagccgccggcgccttcgggaaagagcgacgccgacatgccgtcgaggttgagccggtacatgctgtcggcggtgtagttgctggcgccgcaggtgtgccatggctgggcggccaccatcgccatgccattgccaaggatgatgagcagctgcaggacgatgggaatgatcatggttgcctatcc
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| CDS seq | atgatcattcccatcgtcctgcagctgctcatcatccttggcaatggcatggcgatggtggccgcccagccatggcacacctgcggcgccagcaactacaccgccgacagcatgtaccggctcaacctcgacggcatgtcggcgtcgctctttcccgaaggcgccggcggctccggcggcggcatattcgtcaggggctcctccggcgccgacccggacaaggtctacgccgtcgcgctctgccgcggcgacgtcgacgacgcccccgcctgcagctcctgcttcgacgccgcgttcaggcgcgcgatgcagctgtgcccgcgcagcaaggacgccaccatctactacgacgagtgcctcctccgcttctccgacacggacatcctcaacatggactccgtccgccgtctcaacacctcggaaatagtccatggcgcgcttgtcctgatgaacctcacctcggagcccatgctacctggccggtctacggcgacggcgaacttcaccggattcttgaagacgatgctgaccgacgtggtagggcaagttctctccacgaggaggcactacgcggcgatccgcatggagatggacgacgggagcagcagtagcaccaccgcagtgccgcgggagttctactgcttggcgcagtgcgcgccagacttgattgaagatatatgctacagctgcctcacgaatttcagcgatcggccggacgggatcgtcatcctctcccagcctcacgcacttacggataagaatggccacaaccaggtttcgtttcatggcggtgttgtggctgagacagcctatttcgcgtcatatcgttacgcagcgcaactactcgtgccagttgaggatagcggcgacgcgcggggcttgaccgccgtcgcagaatcgaagagaggtgccgcgttgaggagcagcgcgagctcggcatcggagctgatggacgtggaggaggatgcggccgtctgcgacgagctccggtgtggggcatggatgacggaggacgcgactaccgcaacgagcttcggcgtggggtggaggatgctgccgctgcgtgaggagtggatgacggaggacgcagccgccggcgatgagctccgacgtggcatgtaccagccgataagcaaagttttggccattgccttggtagctccactacttgcattgtttatctgcgtcatcgtttccttcatattgacaaggcatataagggGagaatttactatttgcctaagaggtaatttctcagaagaaaacaaacttgggcaaggaggctttggtcctgtatacaagggccgatttcctgatggggtggagatagcagttaagaggcttgcttctcattcagggcaaggcttaacagagttcaaaaatgaaattcagctcatagctaagctccagcacacaaatttggttaggctcctgggatgctgttatcagcgacaggagaaaatactagtatatgaatatttgccaaataaaagcttggatttcttcatttttgatgaaacaagaagagctttagtagattggaataaacgccttgcgataataaatgggatagcacaaggacttctatatttgcataagcactctcggttgcgtatcattcatagagatctcaaagcaggcaacattctattggaccatgaaatgaaccctaaaatttcagattttgggcttgcaaaaatatttagcacaaatgatactgaagggaatacaaaaaggatcgtcgggacctatggttatatggctccagagtatgcttccgagggccttttctcaatcaaatctgatgtattcagcttcggtgtgctaattctcgagactgtcagtggaaaaagaacatcaagttttcatcggcatggagactttatcaaccttcttggacacgcatggcagatgtggaaagatgaaacatggcttcaactcgtagatacatcattagtaatagagtctcatacaccagagatggcacgatgtattaacattgctttgctttgtgtgcaagagaatgccgcagatcgacccactatgtcagaggttgttgcgatgctaaccagcaagagtatgaccctacctgagcctaagtaccctgctttttaccacatgagggtgacaaaggaagagccatcaactgttattatggtatctagtgctaatggtatcacactgtctgttgtagatggtagatag
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| Protein seq | MIIPIVLQLLIILGNGMAMVAAQPWHTCGASNYTADSMYRLNLDGMSASLFPEGAGGSGGGIFVRGSSGADPDKVYAVALCRGDVDDAPACSSCFDAAFRRAMQLCPRSKDATIYYDECLLRFSDTDILNMDSVRRLNTSEIVHGALVLMNLTSEPMLPGRSTATANFTGFLKTMLTDVVGQVLSTRRHYAAIRMEMDDGSSSSTTAVPREFYCLAQCAPDLIEDICYSCLTNFSDRPDGIVILSQPHALTDKNGHNQVSFHGGVVAETAYFASYRYAAQLLVPVEDSGDARGLTAVAESKRGAALRSSASSASELMDVEEDAAVCDELRCGAWMTEDATTATSFGVGWRMLPLREEWMTEDAAAGDELRRGMYQPISKVLAIALVAPLLALFICVIVSFILTRHIRGEFTICLRGNFSEENKLGQGGFGPVYKGRFPDGVEIAVKRLASHSGQGLTEFKNEIQLIAKLQHTNLVRLLGCCYQRQEKILVYEYLPNKSLDFFIFDETRRALVDWNKRLAIINGIAQGLLYLHKHSRLRIIHRDLKAGNILLDHEMNPKISDFGLAKIFSTNDTEGNTKRIVGTYGYMAPEYASEGLFSIKSDVFSFGVLILETVSGKRTSSFHRHGDFINLLGHAWQMWKDETWLQLVDTSLVIESHTPEMARCINIALLCVQENAADRPTMSEVVAMLTSKSMTLPEPKYPAFYHMRVTKEEPSTVIMVSSANGITLSVVDGR |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 [UniProtKB/Swiss-Prot:Q9ZR08] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_01g0019890 | OsLaMu_01g0019890.01 | Chr01 | 21830416 | 21834971 | - | NAM | ||
| CDS seq | atgatcattcccatcgtcctgcagctgctcatcatccttggcaatggcatggcgatggtggccgcccagccatggcacacctgcggcgccagcaactacaccgccgacagcatgtaccggctcaacctcgacggcatgtcggcgtcgctctttcccgaaggcgccggcggctccggcggcggcatattcgtcaggggctcctccggcgccgacccggacaaggtctacgccgtcgcgctctgccgcggcgacgtcgacgacgcccccgcctgcagctcctgcttcgacgccgcgttcaggcgcgcgatgcagctgtgcccgcgcagcaaggacgccaccatctactacgacgagtgcctcctccgcttctccgacacggacatcctcaacatggactccgtccgccgtctcaacacctcggaaatagtccatggcgcgcttgtcctgatgaacctcacctcggagcccatgctacctggccggtctacggcgacggcgaacttcaccggattcttgaagacgatgctgaccgacgtggtagggcaagttctctccacgaggaggcactacgcggcgatccgcatggagatggacgacgggagcagcagtagcaccaccgcagtgccgcgggagttctactgcttggcgcagtgcgcgccagacttgattgaagatatatgctacagctgcctcacgaatttcagcgatcggccggacgggatcgtcatcctctcccagcctcacgcacttacggataagaatggccacaaccaggtttcgtttcatggcggtgttgtggctgagacagcctatttcgcgtcatatcgttacgcagcgcaactactcgtgccagttgaggatagcggcgacgcgcggggcttgaccgccgtcgcagaatcgaagagaggtgccgcgttgaggagcagcgcgagctcggcatcggagctgatggacgtggaggaggatgcggccgtctgcgacgagctccggtgtggggcatggatgacggaggacgcgactaccgcaacgagcttcggcgtggggtggaggatgctgccgctgcgtgaggagtggatgacggaggacgcagccgccggcgatgagctccgacgtggcatgtaccagccgataagcaaagttttggccattgccttggtagctccactacttgcattgtttatctgcgtcatcgtttccttcatattgacaaggcatataagggGagaatttactatttgcctaagaggtaatttctcagaagaaaacaaacttgggcaaggaggctttggtcctgtatacaagggccgatttcctgatggggtggagatagcagttaagaggcttgcttctcattcagggcaaggcttaacagagttcaaaaatgaaattcagctcatagctaagctccagcacacaaatttggttaggctcctgggatgctgttatcagcgacaggagaaaatactagtatatgaatatttgccaaataaaagcttggatttcttcatttttgatgaaacaagaagagctttagtagattggaataaacgccttgcgataataaatgggatagcacaaggacttctatatttgcataagcactctcggttgcgtatcattcatagagatctcaaagcaggcaacattctattggaccatgaaatgaaccctaaaatttcagattttgggcttgcaaaaatatttagcacaaatgatactgaagggaatacaaaaaggatcgtcgggacctatggttatatggctccagagtatgcttccgagggccttttctcaatcaaatctgatgtattcagcttcggtgtgctaattctcgagactgtcagtggaaaaagaacatcaagttttcatcggcatggagactttatcaaccttcttggacacgcatggcagatgtggaaagatgaaacatggcttcaactcgtagatacatcattagtaatagagtctcatacaccagagatggcacgatgtattaacattgctttgctttgtgtgcaagagaatgccgcagatcgacccactatgtcagaggttgttgcgatgctaaccagcaagagtatgaccctacctgagcctaagtaccctgctttttaccacatgagggtgacaaaggaagagccatcaactgttattatggtatctagtgctaatggtatcacactgtctgttgtagatggtagatag
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| Protein seq | MIIPIVLQLLIILGNGMAMVAAQPWHTCGASNYTADSMYRLNLDGMSASLFPEGAGGSGGGIFVRGSSGADPDKVYAVALCRGDVDDAPACSSCFDAAFRRAMQLCPRSKDATIYYDECLLRFSDTDILNMDSVRRLNTSEIVHGALVLMNLTSEPMLPGRSTATANFTGFLKTMLTDVVGQVLSTRRHYAAIRMEMDDGSSSSTTAVPREFYCLAQCAPDLIEDICYSCLTNFSDRPDGIVILSQPHALTDKNGHNQVSFHGGVVAETAYFASYRYAAQLLVPVEDSGDARGLTAVAESKRGAALRSSASSASELMDVEEDAAVCDELRCGAWMTEDATTATSFGVGWRMLPLREEWMTEDAAAGDELRRGMYQPISKVLAIALVAPLLALFICVIVSFILTRHIRGEFTICLRGNFSEENKLGQGGFGPVYKGRFPDGVEIAVKRLASHSGQGLTEFKNEIQLIAKLQHTNLVRLLGCCYQRQEKILVYEYLPNKSLDFFIFDETRRALVDWNKRLAIINGIAQGLLYLHKHSRLRIIHRDLKAGNILLDHEMNPKISDFGLAKIFSTNDTEGNTKRIVGTYGYMAPEYASEGLFSIKSDVFSFGVLILETVSGKRTSSFHRHGDFINLLGHAWQMWKDETWLQLVDTSLVIESHTPEMARCINIALLCVQENAADRPTMSEVVAMLTSKSMTLPEPKYPAFYHMRVTKEEPSTVIMVSSANGITLSVVDGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.386536 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0545500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g36500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0545500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0020760 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0020370 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0020700 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0020090 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0019980 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0344300 | RBH | 0 | 0.1001595 | 0.0120175 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0019910 | RBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0340300 | RBH | 0 | 0.0664975 | 0.0055245 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0019940 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0019840 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0020090 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0019990 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023830 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G021260 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0020980 | RBH | 0.0 | 0.000000 | 0.0 |
