Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_11g0021340 | OGI:11072120 | 15/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr11:26471019-26473194 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcatttcgtcatcgtcttcgtcatgccgatcaccatgtcatagatctccttcagcatcatcatctgccgcgggtcgtcgccgtcatttctgtctctcccgttctgcgccacgtcgtcgtcgtcgacggcggcggcggtggcgcggccggagctgcgcggcatgctcagggcctcgcgcagcagctcatgcaccttggacaccgcggcggcggactcggacgacggcggcgacggcatgccgctcagcgcgtcgagtatcttgcacagcatcgcgttctgcgtcgtcggcgccgccacgccgccgctgctgctcgccggcggtggcgggacctcctcctgctccgccgccatgggctgcagctgctgctcggcctccttggccttctccacctcgccgtcggtgatggcatcgacagagaggcgaaccttcttgttcgtcattgcagtttcttggacatattcagagagttgattgttgcaggtttcatggggatcagtgttctgctgcacctgtttttcgttttcagtgatctctggagcatcatctagctcaatctctgggaaatatggaaaatgtcagtgtgtaatagctcaaatttaatttaattccatgtcagatatcaatgacagtaagcatatgacacgttagaagataaactttctggaatttcattcaatcatgagaaatagccatcaaacatattgttgttgattccaatgccccacatatttttaatttgtaaaaaattggcttcaaaactgtagctgttctgacaagtaaaacagtatgcataaaactaaactgcagtggacaatcaatcagcttacaattgaagatatgcaattgctttcaattggaaaagttggaaatgtctcctaaaaaaaagttagaaatgaaatcaattacccatcacatcaggataattctatctgattatgtgatgatccttctataaataaagaaaaagtaaagcatagattccgtaacatagtcagtgctaagaaccaaacacaagcactgagtaaatcagcataataataagatgagaagacaaaaattagtacacataccttggagcgcctgaagcagaacttcaggacccatcgattcagcttgaacaaccttcagtctttcgatcagatcagtacatttctcgaacaatttcttccctttcgaatcctcgctaacactgaacacctcctgaacatactcgagctctcgcgccaacgcatccgtgccccagatcttggcacaatgctggaacacattcctgacccaccccagcagctcagatgtcccatggcaggccttgcagaagaacactgtcacatagtgggcaactccatcctcaaccgtaatcacagtcttaatctgctcctcacgaattgcacagccagcatgagtccagtgagagcagccgtcacacccaatccagcggcatgtgttgacatcgaaatcgaacccgttgcagaccacacacatgcagaggttgcagaagcctctcctgcagcagcaggcatcgcagtcgcactcctcggcagggagaacactctggcaggagatgttcttgcatctctcgtaggcgaagatctccgcgagacggctccgtggcacgctgacattttcgtgcagatatgccgggatccccatcttgagggcaacaaacatctccaactgcacatggtgagccgtcagaagcgttaccggtgtcaggtcaggcctgatttcgacatgcttttgaagacagacgagttgctctacatggctctgatcatcgatgtcctccatgagcaaccggagcgcgatcttgagtttttccagcagccgctctgtcatcgcgttcattttgctggcaacaatggcgatgtcgcccttgacaacatcccagacagtcaaatcttcagggatctgagaatgaaaaatgagatgcaaattagaggcgtcatcggtggtgataaactactcatcatctattttcatagcaattgctagagaaggcaatgtctgtgatctggaactgacattctgtatggcagaattgtgtcctgaatattcagaactcagcaagggttcttggttttccaaggccgaagagcgcggtgtctgaaggcctatggagtcgacattttgtgaaggtttcttccgacggaattttcgacgggatgagggtgccat
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| CDS seq | atggcaccctcatcccgtcgaaaattccgtcggaagaaaccttcacaaaatgtcgactccataggccttcagacaccgcgctcttcggccttggaaaaccaagaacccttgctgagttctgaatattcaggacacaattctgccatacagaatatccctgaagatttgactgtctgggatgttgtcaagggcgacatcgccattgttgccagcaaaatgaacgcgatgacagagcggctgctggaaaaactcaagatcgcgctccggttgctcatggaggacatcgatgatcagagccatgtagagcaactcgtctgtcttcaaaagcatgtcgaaatcaggcctgacctgacaccggtaacgcttctgacggctcaccatgtgcagttggagatgtttgttgccctcaagatggggatcccggcatatctgcacgaaaatgtcagcgtgccacggagccgtctcgcggagatcttcgcctacgagagatgcaagaacatctcctgccagagtgttctccctgccgaggagtgcgactgcgatgcctgctgctgcaggagaggcttctgcaacctctgcatgtgtgtggtctgcaacgggttcgatttcgatgtcaacacatgccgctggattgggtgtgacggctgctctcactggactcatgctggctgtgcaattcgtgaggagcagattaagactgtgattacggttgaggatggagttgcccactatgtgacagtgttcttctgcaaggcctgccatgggacatctgagctgctggggtgggtcaggaatgtgttccagcattgtgccaagatctggggcacggatgcgttggcgcgagagctcgagtatgttcaggaggtgttcagtgttagcgaggattcgaaagggaagaaattgttcgagaaatgtactgatctgatcgaaagactgaaggttgttcaagctgaatcgatgggtcctgaagttctgcttcaggcgctccaagagattgagctagatgatgctccagagatcactgaaaacgaaaaacaggtgcagcagaacactgatccccatgaaacctgcaacaatcaactctctgaatatgtccaagaaactgcaatgacgaacaagaaggttcgcctctctgtcgatgccatcaccgacggcgaggtggagaaggccaaggaggccgagcagcagctgcagcccatggcggcggagcaggaggaggtcccgccaccgccggcgagcagcagcggcggcgtggcggcgccgacgacgcagaacgcgatgctgtgcaagatactcgacgcgctgagcggcatgccgtcgccgccgtcgtccgagtccgccgccgcggtgtccaaggtgcatgagctgctgcgcgaggccctgagcatgccgcgcagctccggccgcgccaccgccgccgccgtcgacgacgacgacgtggcgcagaacgggagagacagaaatgacggcgacgacccgcggcagatgatgatgctgaaggagatctatgacatggtgatcggcatgacgaagacgatgacgaaatga
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| Protein seq | MAPSSRRKFRRKKPSQNVDSIGLQTPRSSALENQEPLLSSEYSGHNSAIQNIPEDLTVWDVVKGDIAIVASKMNAMTERLLEKLKIALRLLMEDIDDQSHVEQLVCLQKHVEIRPDLTPVTLLTAHHVQLEMFVALKMGIPAYLHENVSVPRSRLAEIFAYERCKNISCQSVLPAEECDCDACCCRRGFCNLCMCVVCNGFDFDVNTCRWIGCDGCSHWTHAGCAIREEQIKTVITVEDGVAHYVTVFFCKACHGTSELLGWVRNVFQHCAKIWGTDALARELEYVQEVFSVSEDSKGKKLFEKCTDLIERLKVVQAESMGPEVLLQALQEIELDDAPEITENEKQVQQNTDPHETCNNQLSEYVQETAMTNKKVRLSVDAITDGEVEKAKEAEQQLQPMAAEQEEVPPPPASSSGGVAAPTTQNAMLCKILDALSGMPSPPSSESAAAVSKVHELLREALSMPRSSGRATAAAVDDDDVAQNGRDRNDGDDPRQMMMLKEIYDMVIGMTKTMTK |
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| Function | OBERON-like protein [UniProtKB/Swiss-Prot:Q84N38] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_11g0021340 | OsKeNa_11g0021340.01 | Chr11 | 26471019 | 26473194 | - | NAM | ||
| CDS seq | atggcaccctcatcccgtcgaaaattccgtcggaagaaaccttcacaaaatgtcgactccataggccttcagacaccgcgctcttcggccttggaaaaccaagaacccttgctgagttctgaatattcaggacacaattctgccatacagaatatccctgaagatttgactgtctgggatgttgtcaagggcgacatcgccattgttgccagcaaaatgaacgcgatgacagagcggctgctggaaaaactcaagatcgcgctccggttgctcatggaggacatcgatgatcagagccatgtagagcaactcgtctgtcttcaaaagcatgtcgaaatcaggcctgacctgacaccggtaacgcttctgacggctcaccatgtgcagttggagatgtttgttgccctcaagatggggatcccggcatatctgcacgaaaatgtcagcgtgccacggagccgtctcgcggagatcttcgcctacgagagatgcaagaacatctcctgccagagtgttctccctgccgaggagtgcgactgcgatgcctgctgctgcaggagaggcttctgcaacctctgcatgtgtgtggtctgcaacgggttcgatttcgatgtcaacacatgccgctggattgggtgtgacggctgctctcactggactcatgctggctgtgcaattcgtgaggagcagattaagactgtgattacggttgaggatggagttgcccactatgtgacagtgttcttctgcaaggcctgccatgggacatctgagctgctggggtgggtcaggaatgtgttccagcattgtgccaagatctggggcacggatgcgttggcgcgagagctcgagtatgttcaggaggtgttcagtgttagcgaggattcgaaagggaagaaattgttcgagaaatgtactgatctgatcgaaagactgaaggttgttcaagctgaatcgatgggtcctgaagttctgcttcaggcgctccaagagattgagctagatgatgctccagagatcactgaaaacgaaaaacaggtgcagcagaacactgatccccatgaaacctgcaacaatcaactctctgaatatgtccaagaaactgcaatgacgaacaagaaggttcgcctctctgtcgatgccatcaccgacggcgaggtggagaaggccaaggaggccgagcagcagctgcagcccatggcggcggagcaggaggaggtcccgccaccgccggcgagcagcagcggcggcgtggcggcgccgacgacgcagaacgcgatgctgtgcaagatactcgacgcgctgagcggcatgccgtcgccgccgtcgtccgagtccgccgccgcggtgtccaaggtgcatgagctgctgcgcgaggccctgagcatgccgcgcagctccggccgcgccaccgccgccgccgtcgacgacgacgacgtggcgcagaacgggagagacagaaatgacggcgacgacccgcggcagatgatgatgctgaaggagatctatgacatggtgatcggcatgacgaagacgatgacgaaatga
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| Protein seq | MAPSSRRKFRRKKPSQNVDSIGLQTPRSSALENQEPLLSSEYSGHNSAIQNIPEDLTVWDVVKGDIAIVASKMNAMTERLLEKLKIALRLLMEDIDDQSHVEQLVCLQKHVEIRPDLTPVTLLTAHHVQLEMFVALKMGIPAYLHENVSVPRSRLAEIFAYERCKNISCQSVLPAEECDCDACCCRRGFCNLCMCVVCNGFDFDVNTCRWIGCDGCSHWTHAGCAIREEQIKTVITVEDGVAHYVTVFFCKACHGTSELLGWVRNVFQHCAKIWGTDALARELEYVQEVFSVSEDSKGKKLFEKCTDLIERLKVVQAESMGPEVLLQALQEIELDDAPEITENEKQVQQNTDPHETCNNQLSEYVQETAMTNKKVRLSVDAITDGEVEKAKEAEQQLQPMAAEQEEVPPPPASSSGGVAAPTTQNAMLCKILDALSGMPSPPSSESAAAVSKVHELLREALSMPRSSGRATAAAVDDDDVAQNGRDRNDGDDPRQMMMLKEIYDMVIGMTKTMTK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0637600 | RBH | 0.0 | 0.0 | 0.298657 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g41880 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0637600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0021410 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0021280 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0020720 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0021250 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0379900 | RBH | 0.872179 | 8.290015 | 0.9282905 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0021710 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0399700 | RBH | 0.328556 | 11.522487 | 0.6131185 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0021620 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0021740 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0021350 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0020960 | RBH | 0.0 | 0.0 | 0.267735 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0021110 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G021090 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0021640 | RBH | 0.0 | 0.0 | 0.0 |
