Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_11g0017340 | OGI:11061480 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr11:21973560-21981561 | ||||||||
| Gene Symbol | RLCK334, OsRLCK334, WAK118, OsWAK118, OsRLCK333, RLCK333 | ||||||||||
| DNA seq | ttaacttgtggtagctcccatggccgtcttcagtttccaagagctcctgatcatctcaaggtgtccagccacttccttcattgttggtctcctgttggtttttggatgcgtgcatctcaacgccaacctcccaatatcatcaagggcatgaatgtcttcttcttctgtgattctctcatcaaacattgcctttccatgtatgtctctgttgtaagttctcaaaaatttagacacaaggagattatccccttcttgacatactggtctattcctgctaatgagctccaagaggacaataccgaagctgtacacatcgtttttgaccgttggtatcccacacttaggaaaacttgggtcaaagtagttcttatagcagttcatattgtcataatcaaacatagcatgcttgttgccctcaataagtctgggtgagactgaaaagcctgctagctttggcacaaagttaccatcgacaagtatattgggtgtcataacataaccgtgtgggatattggttctcataacagaaccttgttggatgagacaagaatgattgtgtagtaatgcttctgcaatcttaattgctatattcaggcgtgaaaccagtcggacagcttttacaccgtacagaatgtcatagagattctctctagaaggatactcgtatataagaactaaaatctcctcctccaagcagcaacctaaaattttgatgatgttcttgtgaacaatttgggactgtatcattgctgcattgctaaaaacctttttctgggccttgtttaccagattgcatttcatcacagccaccaatgtattatcctcaagttttccttcatagacatcagtgttagatggatctccctccccttgagcccaacggctcaagggggccttgacccgcgccctgatcgggggcgcccagcccaatggctggtgggcccccgtcacactgtgccatataaagaggggtggaggacgggacgggataagacacacaaaaggaacgaggttcgtcgccgccgccactccaccccataaaccctaaccgatcgagggggcgcagccagtgacgggaagtccaccgccgcgccacgcctcgtcgttgacaccgtcgctgctgcaaccgcatcaccgccatcggaaccgagcacatcgtcgccgccgtccacgtcaagcccgcgacgacaacgacgatggccggccggacttcctcttcctcaacaacgactggtcacaaccctaaatcctcactccctctttgttcattcatctattgttgttcatccattgcaaatagaaccacccgactagatctaagcctaggtgatccaatagacaactctaacaatggtatcagagccatcctagcgtttagtttggttcggggatagacatccacagagaagaaagaaatccaaagagaaaagcaaacgatccaacggatcaaaaagatcgaaaccctaaccctaatcttacctcgtcgccggccgtcgatgacgccggccacggagggggggaggggcaaagaggcaccgccgaggagccactcgacggccgcgcgcgcacccgcgggtgcacgcgcgcgccggcgagggggcccgtggcggcgccgccatctccgtttttcggccgccgctctctctcacacggtgggggctagagacggtggggggagcggagaagagaaaaggaagagggcgcaagggccgctggcggcggcgacgccgctccgctcggccgctccgcccggcggcgcgctagagaaaaagtggacgcgcggcggcgcaagggtcgccggcgtagatgacgccactcggcgcggccgcacccgcccgcaagagagaagaggctagggtttcggccggccggcggctggggtcgggtttttttgtccctccgatctcagcgcccggccgtccgatcgaaaccctagcgatcggacggccgacggcggccgggccgaaagcggcccaagtggggagcgcgcggcggcggctttcccggcccaggcccaggttgcggcctgggggaggggagggggcgctcacccgcgcgcaaggtggccatgggccgaccggcaaaggccggaaaagttcaatttaggtccctcggggccgaaagaaaaagaaaagaaaagtttaataataggtcctctcagaagctttttcaattatgtataattattgtgattatttctaagcaatttgaaccaacgtgaaaattgtttagagaatagataaatgtgagaaatgcttctgaacatgtattttgtatattttcatgcaaattacaatagaattttgaattgtttttacatgttttacctctgtttaaatctgaaccaacgggagaattttacagagtaaataacaaagttttgttattgtttatacgaattgtatatagatcttccgctgcaaatagatgaaattgatgaaaattagtgtttctaaaattaaatttcaaaccaacgggagattttaattttaggaacattaattatgtgctatgatgttgtaatttttctgaccaacgttgataattgcaatgttatagttatggctttatgtgttatgtctattttttgcccaacggtgatgtagacttaatacataataattttaatgttaatttttgttctcacaatacatgatcatctcaggtggctactccttgatgggttacattaaagatattccgaccctgaaaggagataactacgaagaatagaaaagagaactcgaccttgcttttatcttgggagaggtggactgggtgttgactaccccatgtcctatagaacctgctgaaattttcagaggtgaaaaagagtcagatgctgaatggcaaaagagagagagggacaatgcttccctcatcatgtcgtatgacattgagcatgcgaaatggtcttcagccaacaagaattgtttggctgcggtaaagaacacgattgagccaaccatattgggctcaatcccagagtatgacactgtctctaagtacctcgaaagtataaagagccagtttactggttcttcaaagttttatgcgacacagctgataaagcagcttgttacagagaggtaccatggaggtggtgtaaaagaccacattcttaggatgagcaacatggcttccaaattgaagcaaaaagatttgggcatctcagatgactttctggtccatctggttttgtcctcattgccaaagaactttgacaaccttgttgtcaactacaaaataagtacagagaattggaatattgaagagctcatctctaattgtgtgcaagaggaggcaagacacaaagagaccaatggtgactccattaaccttgtcaaagataacaaggaaaagagccacaggtcaccctccttaaaagaaaaacagcctcagcatctgcctcagaaacaacagtttacagttgagacaagatcagtgtctacactgcaagaagacaagacattccaagaaagatcatcctgacttcctgacagtgatcatggcaaagaaaggtgagaacattattacatttgtaaagaatctcattatgattggttattctagatccacatggtggatttattctggagcaactattcatgtgtgtaattgtttaaagggattccgttcaatgaggactacgtaaagaagtgaaagatccattagagttgccactggagttgaagcaaaagttgaagctgttggagattttcgcctagaactcgcgaatggcttcacacttttacttccagatgtttttatgtccattctttgcaaagaaacttgataataagtgtatccaaattggattctgatagatatgaaatggcaaatgtgaactatggtataataatgaatgtattggtcttgtgttgcaagatcagttttatttgttatctctttctgagaatgtgaatgttgtgtcctcgttgacaaaagaaaagaaagcgaacttctgatgtctcatcgaaattatggcactgttgtttatgccatatttcgagggggagaattgagagactggttaagaatgtagttcttcctccattggagttctcagttttagaacgatgcatacaatgtatagaatgcatcggtgcccaaaacaccgtatgagctatggatcctccgtgtgtgggggagtcctgcaaaggataaagtatttaacccaaaacagtaagctgccgttttattggctattctgaaagatcaaagggtcatcgtttctactgtccaaacagttatacaaagtttgtagaaacgagacacgccgtcttcttggaagacgaaatgattagggggagctcggtaattcgagaaattgatcttgaggagaggcgggtgtctgtacccgctccgtcgactcaggaacctttcttctctctacctgcaaatgttgtgccagcaatgcatgccgttgcggtaccaacacctgttgttatctctcctgtggcaacaatgaatgaaagtgaggaacctgttctacaggattcaacagaaattattgccacatcagaggaggagctgcaacagcctcaaacagataatgtgccagaataggaggcccctagaaggcctgaaagagtcgcatatggaggatgatcccatctcatatgaagaggccatgagaagccatgaaagatgaaatgaaatcaatgaaattaaatgatgtctgggatttagaagaaattcctaaaggagccaaaacagtaggctgtaaatgggtctacaaaaccaaatatgactctagagggaatatagaaaagtttaaagtgcgactcgtggcaaaaggcttcacgcaaagagaagagattacaatgagacattttctccagtctcttgtaaagattccttcataattataatggcactagtggcacattatgatttggaattacatcaaatggatgtaaaaaacggaaattctaaatggtgatttaaaacatggcataaccgaaaggtttcgtcatgaaatgaaacgaaaatatgggatgccgtataaagagatccatttatgggttaaagcaaagcttcgagacaatgctacttgaagtttgatggaacaataaagaaatttgggttttcaagagaatgtagaggacaactgtattgattcaaagttaagaatgggagactcattttcctaattctgtatgtagatgacgttctactggctagtagtgatgtcaatctactacaggaaataaagaaattcttgtcctcaaactttgacatgaaagacctcggtgaggcttcatatgttttgggcatagagattcaccgaaatagaacaaagtatgcattgggattttctcaaaaggcatatatatagaaaaggtgttgaagaaattcaatatgtacagatgcagtgctacacctgctcctatagtcaaaggcgaaaagtatggggcatcgcaatgtcccagaaatcagtatgagctcaataaaatgaaaacaaagcaatatgcgtcagctgtaggaagcctacagtacgcgcaagtgtgcacacgacctgatttggcatttgttaccgggttatttggcagatttcaaagtgatccaggcctagagcactggaaattggtatagaaagtcttgcgtgattgcaaggaacaaaaggcctcatgatgtcttacagaaaagcagaatcgctccagatagtggggtattcggattctgactttgcaaaagataatacaaagttaacatcgggatacatgtttaccctggcagtaggagctatttcatggaaaagctcaaaacagactaccactgcagggtctaccatgtatgccgagtttatagcatgccatgaggctacggggcaggtgaactggctaatgaagttcatacccggttttaaaggtggttgatagtattgagaaaccactaaagttatactgcgataaagaacccacagtaatgtactctcacaacaattagtcaagtggtgctgccaaacacattgacataaagtactatgttgtgaaagacaaagtccgggatcaaacaatcagtctcgagcacataagaacagaaaggatgctcgcggatccgctcatgaaaggcctacctcccaacatgttcaaggaacatgtagcatgcatgggttttaagggaagccttatgaatcctggactatagggcccaaaagttaaagtatctgtttctgaatagagatgtgtatagtggctgtcgaatccatcggtaattaaccgtgacgatgaaacatgctctatatgtaaatctgtgatggaatagaaaaagctaaaggaaatagtgagatcaagggggagaatgttagatggatctccctccccttgagcccaacggctcaagggggccttgacccgcgccctgatcgggggcgcccagcccaatggctggtgggcccccgtcacactgtgccatataaagaggggtggaggacgggacgggataagacacacaaaaggaacgaggttcgtcgccgccgccactccaccccataaaccctaaccgatcgagggggcgcagccagtgacgggaagtccaccgccgcgccacgcctcgtcgttgacaccgtcgctgctgcaaccgcatcaccgccatcggaaccgagcacatcgtcgccgccgtccacgtcaagcccgcgacgacaacgacgatggccggccggacttcctcttcctcaacaacgactggtcacaaccctaaatcctctcactccctctttgttcattcatctattgttgttcatccattgcaaatagaaccacccgactagatctaagcctaggtgatccaatagacaactctaacaatcagatgaccatcctttaccaattaagtgtgagtaatttttcgtgtatcgacttacttcttcctttgtgaaaattcttccatcaatgctgagttctggtagtatatcagaattgctggtattcctcttagaaatgccaaaacagcgtagcaccgagctagtagatctgatactgcttgtgccttgtccactccctatatccaattcattttctgttctccaaaagaatcgccggcttatgcttctgtcacctccacgcagagctttccaaagcaccagaagccgttttgtgacattgttcattgtaggacgtttatcactatccaaatgttacacattctgttgccaactttcctatatcttcaagaatctttatattgcttgcttgtgttatttctgcatcaaatatttccgttgacaccacttttcctttgacaaaggctttactgaaagtttcaatcaagctatttcccccagcttttaccctctttctggtgattagttccaagagaactatcccaaaactatagacatcactctttcaggtaatccgcccagtgtgaagatatataggatccatgtaatccatacttttacagtatttgtacatcgagtaatgcctccagagagatgccttgacagtccaaaattagatacttttgctgtaagactatcatttagaagtatgtttgctggcttaatatcaccatgatatacaaggctgtcaagatcaactgataagtgcatcgaatgcatgtagctcaatgcttctgcgcacccgatagcaatgcccaatcttgtatccaaagagatggaaatatcactcttgtgaagtgcatcttcaaggttcccattggagataaactcagttaccaacattagggtgttttcccctgtactataacctatgaacttcactacattcttatggttgattttactatgaatgcttacttcttccatgaactcctttctcaaatcggtatggatatatctcttcaccgcaactacatcacggtcataatcatcaatgaatcctttaaagacttctccgaacccgccttttccaatgggaatgctatagttgcccgtaattctctcaatatcatgttttgtaaaactcctaatattactattatcatcccattgactatgatctcctgtcataatcgtgtcttcaggaagttccat
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| CDS seq | atggaacttcctgaagacacgattatgacaggagatcatagtcaatgggatgataatagtaatattaggagttttacaaaacatgatattgagagaattacgggcaactatagcattcccattggaaaaggcgggttcggagaagtctttaaaggattcattgatgattatgaccgtgatgtagttgcggtgaagagatatatccataccgatttgagaaaggagttcatggaagaagtaagcattcatagtaaaatcaaccataagaatgtagtgaagttcataggttatagtacaggggaaaacaccctaatgttggtaactgagtttatctccaatgggaaccttgaagatgcacttcacaagagtgatatttccatctctttggatacaagattgggcattgctatcgggtgcgcagaagcattgagctacatgcattcgatgcacttatcagttgatcttgacagccttgtatatcatggtgatattaagccagcaaacatacttctaaatgatagtcttacagcaaaagtatctaattttggactgtcaaggcatctctctggaggcattactcgatgttgctgcttggaggaggagattttagttcttatatacgagtatccttctagagagaatctctatgacattctgtacggtgtaaaagctgtccgactggtttcacgcctgaatatagcaattaagattgcagaagcattactacacaatcattcttgtctcatccaacaaggttctgttatgagaaccaatatcccacacggttatgttatgacacccaatatacttgtcgatggtaactttgtgccaaagctagcaggcttttcagtctcacccagacttattgagggcaacaagcatgctatgtttgattatgacaatatgaactgctataagaactactttgacccaagttttcctaagtgtgggataccaacggtcaaaaacgatgtgtacagcttcggtattgtcctcttggagctcattagcaggaatagaccagtatgtcaagaaggggataatctccttgtgtctaaatttttgagaacttacaacagagacatacatggaaaggcaatgtttgatgagagaatcacagaagaagaagacattcatgcccttgatgatattgggaggttggcgttgagatgcacgcatccaaaaaccaacaggagaccaacaatgaaggaagtggctggacaccttgagatgatcaggagctcttggaaactgaagacggccatgggagctaccacaagttaa
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| Protein seq | MELPEDTIMTGDHSQWDDNSNIRSFTKHDIERITGNYSIPIGKGGFGEVFKGFIDDYDRDVVAVKRYIHTDLRKEFMEEVSIHSKINHKNVVKFIGYSTGENTLMLVTEFISNGNLEDALHKSDISISLDTRLGIAIGCAEALSYMHSMHLSVDLDSLVYHGDIKPANILLNDSLTAKVSNFGLSRHLSGGITRCCCLEEEILVLIYEYPSRENLYDILYGVKAVRLVSRLNIAIKIAEALLHNHSCLIQQGSVMRTNIPHGYVMTPNILVDGNFVPKLAGFSVSPRLIEGNKHAMFDYDNMNCYKNYFDPSFPKCGIPTVKNDVYSFGIVLLELISRNRPVCQEGDNLLVSKFLRTYNRDIHGKAMFDERITEEEDIHALDDIGRLALRCTHPKTNRRPTMKEVAGHLEMIRSSWKLKTAMGATTS |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [UniProtKB/Swiss-Prot:Q8RWZ5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_11g0017340 | OsKeNa_11g0017340.01 | Chr11 | 21973560 | 21981561 | - | NAM | ||
| CDS seq | atggaacttcctgaagacacgattatgacaggagatcatagtcaatgggatgataatagtaatattaggagttttacaaaacatgatattgagagaattacgggcaactatagcattcccattggaaaaggcgggttcggagaagtctttaaaggattcattgatgattatgaccgtgatgtagttgcggtgaagagatatatccataccgatttgagaaaggagttcatggaagaagtaagcattcatagtaaaatcaaccataagaatgtagtgaagttcataggttatagtacaggggaaaacaccctaatgttggtaactgagtttatctccaatgggaaccttgaagatgcacttcacaagagtgatatttccatctctttggatacaagattgggcattgctatcgggtgcgcagaagcattgagctacatgcattcgatgcacttatcagttgatcttgacagccttgtatatcatggtgatattaagccagcaaacatacttctaaatgatagtcttacagcaaaagtatctaattttggactgtcaaggcatctctctggaggcattactcgatgttgctgcttggaggaggagattttagttcttatatacgagtatccttctagagagaatctctatgacattctgtacggtgtaaaagctgtccgactggtttcacgcctgaatatagcaattaagattgcagaagcattactacacaatcattcttgtctcatccaacaaggttctgttatgagaaccaatatcccacacggttatgttatgacacccaatatacttgtcgatggtaactttgtgccaaagctagcaggcttttcagtctcacccagacttattgagggcaacaagcatgctatgtttgattatgacaatatgaactgctataagaactactttgacccaagttttcctaagtgtgggataccaacggtcaaaaacgatgtgtacagcttcggtattgtcctcttggagctcattagcaggaatagaccagtatgtcaagaaggggataatctccttgtgtctaaatttttgagaacttacaacagagacatacatggaaaggcaatgtttgatgagagaatcacagaagaagaagacattcatgcccttgatgatattgggaggttggcgttgagatgcacgcatccaaaaaccaacaggagaccaacaatgaaggaagtggctggacaccttgagatgatcaggagctcttggaaactgaagacggccatgggagctaccacaagttaa
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| Protein seq | MELPEDTIMTGDHSQWDDNSNIRSFTKHDIERITGNYSIPIGKGGFGEVFKGFIDDYDRDVVAVKRYIHTDLRKEFMEEVSIHSKINHKNVVKFIGYSTGENTLMLVTEFISNGNLEDALHKSDISISLDTRLGIAIGCAEALSYMHSMHLSVDLDSLVYHGDIKPANILLNDSLTAKVSNFGLSRHLSGGITRCCCLEEEILVLIYEYPSRENLYDILYGVKAVRLVSRLNIAIKIAEALLHNHSCLIQQGSVMRTNIPHGYVMTPNILVDGNFVPKLAGFSVSPRLIEGNKHAMFDYDNMNCYKNYFDPSFPKCGIPTVKNDVYSFGIVLLELISRNRPVCQEGDNLLVSKFLRTYNRDIHGKAMFDERITEEEDIHALDDIGRLALRCTHPKTNRRPTMKEVAGHLEMIRSSWKLKTAMGATTS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 1.149969 | 0.744601 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0556400 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g35260 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0556400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0017280 | RBH | 0.462349 | 2.043714 | 2.421232 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0017280 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0017220 | RBH | 0.330722 | 0.0 | 1.566111 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0016840 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0017120 | SBH | 2.109922 | 0.000000 | 1.494202 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0322900 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0017640 | SBH | 0.052019 | 0.0 | 0.375510 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0333200 | RBH | 1.0012475 | 9.442865 | 0.1699085 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0017460 | SBH | 0.165720 | 0.021370 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0017480 | SBH | 0.457837 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0017000 | SBH | 1.651523 | 3.913161 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0016890 | SBH | 0.099501 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0017030 | SBH | 0.100877 | 0.465939 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G017000 | SBH | 0.0 | 0.000000 | 0.287322 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0017340 | SBH | 0.0 | 16.818111 | 0.739766 |
