Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_11g0015720 | OGI:11083360 | 15/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr11:20399689-20402253 | ||||||||
| Gene Symbol | RLCK329, OsRLCK329 | ||||||||||
| DNA seq | atggcgttgggttggcgatcctgctttgctctctgcctcgccgtggcgctggtgcacggagcgtgcctgccggtggccgcggcgctggtcgggccgaccaacctcaccgccggggcctcgctgacgccgcccggctacatcaccagcccgtccggcgacttcgccttcggtttcctctccctcggctccggcaacaacccgggtaaattcatcctcgccacgtggttcgtcttcggcgccggcgccggcggcagcaatgcgtcactgccgtcgccgcagtctgtggtgtggttcgccaagcagtcggtgtccggcgacacggccgtcggcacggcgcagtccgcgctcagcgtcacggcggacggccagctcgcgctcgccgacgccgccggccgcgtgctgtggcgtgcgccgatcgcccggctcgcccgcggctccgtcctcgcgctccgcgactccggcagcctccggttcctcggcgacgccggcgacgtgctgtgggatagctcctggtacccgacggacacgctcctgccgggacagtcgctggccatggacggcggccggtcgcaggggaagctctactccaagcgcgccgacgcggagttcaccaccggccgcttcagcatgggcatccagaccgacggcaacgtcgtcctctacgtcgacctcctcgccggcaacagcccggacaacgcttactggcaggcttacaccaacagccccgacggcaacacgacggtgacgttcgacgagcagggccgcctcaattacaccctccacaacggcaccgtgcagagcttgatatcgagctccaccggcgccggcggcgactactaccgcctcgccaggatggaccccgacggcatcgtccgcgtctacttcagccccaagaacgccgccggcgccggcaacgcgtcttggaccatctccggcgcgttccccagcgacggctgcaacaagaggacgtccgggctgcagggcatgtgcggcccgggctcctactgcgtggagacgaaggaccggctcagctgcttgtgccccagcgggtacacttacaccgacacgcagcacaaggacagcggctgctcgccggagttcgtgccgcagacgtgcgaaggcggcggcggcgacaactccgacgagttcgcgctcgtcgagctccccagcacaacgtgggaggcctccatttactacaagaagttcacgtcgaccaatgagagccagtgccggagttactgcctcaacgactgctactgcgccgccgcgctgctgatcgccgggaccgactgcgtggagatggcggcgctgacgaacggtcggcaggcgaatgacgtcaccacgaaggcacttgtcaaggtgcgtaccaggggcagcagcggtcgtcgtccaccggcgagagcaagaacggcggtgccgtacatagtcgccaccgtctgcttggccttcctgttgctggccaccatcgtcgccggcggcttcctggcacgcaaccgcctcggcaagaacagggacagagagagccagccgctgctgacgacgagcgtgagagctttcagcagcaaggagctccaccaagccaccaatggcttcgccaagctgctcggcaaaggaagcttcggcgaggtgtacaaagggtcggtgaggtcgccggaggcagtacggctcgtcgcggtgaagaggctgattagttcaaacgagtacagcgagcgagagttcgccaacgaggtgcagtccgtcgggcagatccaccaccggaacctcgtccgcatgatcggctactgcaaccaaggcacggagcggatgttggtgttcgagttcatgccgggcggctcgctccgcggcgtcctcttcgggccgcccggccgccggcgaccaccgtggcgctggcgcgccgaggcggcgctcggcatcgccagggggatcgagtatctgcacgaagggtgcgcctcgccgatcatccactgcgacatcaagccggacaacatactgatcgacggcaagaacagcccgaggatcaccgacttcggcatcgccaagctcctcggcgaccacaccgtgcacgccacggtgaccgacgtgaggggcaccaggggctacatcgcgccggagtggctccgcggcgacgcccgcgtggacaccaaggcggacgtgtacagcttcggcgtcgtgctgctggagatcatcacctgccggaggtgccaggagccgctccccccagaggatcacctccacggcggcagcgacgacgagacggtcacgctgttcgggtgggcagggcagctggtgggcgccgggaggacggagctgatgctgcccggcgtcgacgacgactacggcgacggcgtggcggcggcggcggacatggagagggtggagagattcgcgcgcgtggcgctgtggtgcgtcgaggcgaacccggtggtccggccgacgatgcaccaggtggtgcagatgctggagggcggcgtggccgatgccgacgcggtgccgcctgcgcctgacccgcccggcggctgcttgcactcgtcgccactaattcccatggctaataaggttgagtga
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| CDS seq | atggcgttgggttggcgatcctgctttgctctctgcctcgccgtggcgctggtgcacggagcgtgcctgccggtggccgcggcgctggtcgggccgaccaacctcaccgccggggcctcgctgacgccgcccggctacatcaccagcccgtccggcgacttcgccttcggtttcctctccctcggctccggcaacaacccgggtaaattcatcctcgccacgtggttcgtcttcggcgccggcgccggcggcagcaatgcgtcactgccgtcgccgcagtctgtggtgtggttcgccaagcagtcggtgtccggcgacacggccgtcggcacggcgcagtccgcgctcagcgtcacggcggacggccagctcgcgctcgccgacgccgccggccgcgtgctgtggcgtgcgccgatcgcccggctcgcccgcggctccgtcctcgcgctccgcgactccggcagcctccggttcctcggcgacgccggcgacgtgctgtgggatagctcctggtacccgacggacacgctcctgccgggacagtcgctggccatggacggcggccggtcgcaggggaagctctactccaagcgcgccgacgcggagttcaccaccggccgcttcagcatgggcatccagaccgacggcaacgtcgtcctctacgtcgacctcctcgccggcaacagcccggacaacgcttactggcaggcttacaccaacagccccgacggcaacacgacggtgacgttcgacgagcagggccgcctcaattacaccctccacaacggcaccgtgcagagcttgatatcgagctccaccggcgccggcggcgactactaccgcctcgccaggatggaccccgacggcatcgtccgcgtctacttcagccccaagaacgccgccggcgccggcaacgcgtcttggaccatctccggcgcgttccccagcgacggctgcaacaagaggacgtccgggctgcagggcatgtgcggcccgggctcctactgcgtggagacgaaggaccggctcagctgcttgtgccccagcgggtacacttacaccgacacgcagcacaaggacagcggctgctcgccggagttcgtgccgcagacgtgcgaaggcggcggcggcgacaactccgacgagttcgcgctcgtcgagctccccagcacaacgtgggaggcctccatttactacaagaagttcacgtcgaccaatgagagccagtgccggagttactgcctcaacgactgctactgcgccgccgcgctgctgatcgccgggaccgactgcgtggagatggcggcgctgacgaacggtcggcaggcgaatgacgtcaccacgaaggcacttgtcaaggtgcgtaccaggggcagcagcggtcgtcgtccaccggcgagagcaagaacggcggtgccgtacatagtcgccaccgtctgcttggccttcctgttgctggccaccatcgtcgccggcggcttcctggcacgcaaccgcctcggcaagaacagggacagagagagccagccgctgctgacgacgagcgtgagagctttcagcagcaaggagctccaccaagccaccaatggcttcgccaagctgctcggcaaaggaagcttcggcgaggtgtacaaagggtcggtgaggtcgccggaggcagtacggctcgtcgcggtgaagaggctgattagttcaaacgagtacagcgagcgagagttcgccaacgaggtgcagtccgtcgggcagatccaccaccggaacctcgtccgcatgatcggctactgcaaccaaggcacggagcggatgttggtgttcgagttcatgccgggcggctcgctccgcggcgcggacgtgtacagcttcggcgtcgtgctgctggagatcatcacctgccggaggtgccaggagccgctccccccagaggatcacctccacggcggcagcgacgacgagacggtcacgctgttcgggtgggcagggcagctggtgggcgccgggaggacggagctgatgctgcccggcgtcgacgacgactacggcgacggcgtggcggcggcggcggacatggagagggtggagagattcgcgcgcgtggcgctgtggtgcgtcgaggcgaacccggtggtccggccgacgatgcaccaggtggtgcagatgctggagggcggcgtggccgatgccgacgcggtgccgcctgcgcctgacccgcccggcggctgcttgcactcgtcgccactaattcccatggctaataaggttgagtga
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| Protein seq | MALGWRSCFALCLAVALVHGACLPVAAALVGPTNLTAGASLTPPGYITSPSGDFAFGFLSLGSGNNPGKFILATWFVFGAGAGGSNASLPSPQSVVWFAKQSVSGDTAVGTAQSALSVTADGQLALADAAGRVLWRAPIARLARGSVLALRDSGSLRFLGDAGDVLWDSSWYPTDTLLPGQSLAMDGGRSQGKLYSKRADAEFTTGRFSMGIQTDGNVVLYVDLLAGNSPDNAYWQAYTNSPDGNTTVTFDEQGRLNYTLHNGTVQSLISSSTGAGGDYYRLARMDPDGIVRVYFSPKNAAGAGNASWTISGAFPSDGCNKRTSGLQGMCGPGSYCVETKDRLSCLCPSGYTYTDTQHKDSGCSPEFVPQTCEGGGGDNSDEFALVELPSTTWEASIYYKKFTSTNESQCRSYCLNDCYCAAALLIAGTDCVEMAALTNGRQANDVTTKALVKVRTRGSSGRRPPARARTAVPYIVATVCLAFLLLATIVAGGFLARNRLGKNRDRESQPLLTTSVRAFSSKELHQATNGFAKLLGKGSFGEVYKGSVRSPEAVRLVAVKRLISSNEYSEREFANEVQSVGQIHHRNLVRMIGYCNQGTERMLVFEFMPGGSLRGADVYSFGVVLLEIITCRRCQEPLPPEDHLHGGSDDETVTLFGWAGQLVGAGRTELMLPGVDDDYGDGVAAAADMERVERFARVALWCVEANPVVRPTMHQVVQMLEGGVADADAVPPAPDPPGGCLHSSPLIPMANKVE |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 [UniProtKB/Swiss-Prot:Q0JEU6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_11g0015720 | OsKeNa_11g0015720.01 | Chr11 | 20399689 | 20402253 | + | NAM | ||
| CDS seq | atggcgttgggttggcgatcctgctttgctctctgcctcgccgtggcgctggtgcacggagcgtgcctgccggtggccgcggcgctggtcgggccgaccaacctcaccgccggggcctcgctgacgccgcccggctacatcaccagcccgtccggcgacttcgccttcggtttcctctccctcggctccggcaacaacccgggtaaattcatcctcgccacgtggttcgtcttcggcgccggcgccggcggcagcaatgcgtcactgccgtcgccgcagtctgtggtgtggttcgccaagcagtcggtgtccggcgacacggccgtcggcacggcgcagtccgcgctcagcgtcacggcggacggccagctcgcgctcgccgacgccgccggccgcgtgctgtggcgtgcgccgatcgcccggctcgcccgcggctccgtcctcgcgctccgcgactccggcagcctccggttcctcggcgacgccggcgacgtgctgtgggatagctcctggtacccgacggacacgctcctgccgggacagtcgctggccatggacggcggccggtcgcaggggaagctctactccaagcgcgccgacgcggagttcaccaccggccgcttcagcatgggcatccagaccgacggcaacgtcgtcctctacgtcgacctcctcgccggcaacagcccggacaacgcttactggcaggcttacaccaacagccccgacggcaacacgacggtgacgttcgacgagcagggccgcctcaattacaccctccacaacggcaccgtgcagagcttgatatcgagctccaccggcgccggcggcgactactaccgcctcgccaggatggaccccgacggcatcgtccgcgtctacttcagccccaagaacgccgccggcgccggcaacgcgtcttggaccatctccggcgcgttccccagcgacggctgcaacaagaggacgtccgggctgcagggcatgtgcggcccgggctcctactgcgtggagacgaaggaccggctcagctgcttgtgccccagcgggtacacttacaccgacacgcagcacaaggacagcggctgctcgccggagttcgtgccgcagacgtgcgaaggcggcggcggcgacaactccgacgagttcgcgctcgtcgagctccccagcacaacgtgggaggcctccatttactacaagaagttcacgtcgaccaatgagagccagtgccggagttactgcctcaacgactgctactgcgccgccgcgctgctgatcgccgggaccgactgcgtggagatggcggcgctgacgaacggtcggcaggcgaatgacgtcaccacgaaggcacttgtcaaggtgcgtaccaggggcagcagcggtcgtcgtccaccggcgagagcaagaacggcggtgccgtacatagtcgccaccgtctgcttggccttcctgttgctggccaccatcgtcgccggcggcttcctggcacgcaaccgcctcggcaagaacagggacagagagagccagccgctgctgacgacgagcgtgagagctttcagcagcaaggagctccaccaagccaccaatggcttcgccaagctgctcggcaaaggaagcttcggcgaggtgtacaaagggtcggtgaggtcgccggaggcagtacggctcgtcgcggtgaagaggctgattagttcaaacgagtacagcgagcgagagttcgccaacgaggtgcagtccgtcgggcagatccaccaccggaacctcgtccgcatgatcggctactgcaaccaaggcacggagcggatgttggtgttcgagttcatgccgggcggctcgctccgcggcgcggacgtgtacagcttcggcgtcgtgctgctggagatcatcacctgccggaggtgccaggagccgctccccccagaggatcacctccacggcggcagcgacgacgagacggtcacgctgttcgggtgggcagggcagctggtgggcgccgggaggacggagctgatgctgcccggcgtcgacgacgactacggcgacggcgtggcggcggcggcggacatggagagggtggagagattcgcgcgcgtggcgctgtggtgcgtcgaggcgaacccggtggtccggccgacgatgcaccaggtggtgcagatgctggagggcggcgtggccgatgccgacgcggtgccgcctgcgcctgacccgcccggcggctgcttgcactcgtcgccactaattcccatggctaataaggttgagtga
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| Protein seq | MALGWRSCFALCLAVALVHGACLPVAAALVGPTNLTAGASLTPPGYITSPSGDFAFGFLSLGSGNNPGKFILATWFVFGAGAGGSNASLPSPQSVVWFAKQSVSGDTAVGTAQSALSVTADGQLALADAAGRVLWRAPIARLARGSVLALRDSGSLRFLGDAGDVLWDSSWYPTDTLLPGQSLAMDGGRSQGKLYSKRADAEFTTGRFSMGIQTDGNVVLYVDLLAGNSPDNAYWQAYTNSPDGNTTVTFDEQGRLNYTLHNGTVQSLISSSTGAGGDYYRLARMDPDGIVRVYFSPKNAAGAGNASWTISGAFPSDGCNKRTSGLQGMCGPGSYCVETKDRLSCLCPSGYTYTDTQHKDSGCSPEFVPQTCEGGGGDNSDEFALVELPSTTWEASIYYKKFTSTNESQCRSYCLNDCYCAAALLIAGTDCVEMAALTNGRQANDVTTKALVKVRTRGSSGRRPPARARTAVPYIVATVCLAFLLLATIVAGGFLARNRLGKNRDRESQPLLTTSVRAFSSKELHQATNGFAKLLGKGSFGEVYKGSVRSPEAVRLVAVKRLISSNEYSEREFANEVQSVGQIHHRNLVRMIGYCNQGTERMLVFEFMPGGSLRGADVYSFGVVLLEIITCRRCQEPLPPEDHLHGGSDDETVTLFGWAGQLVGAGRTELMLPGVDDDYGDGVAAAADMERVERFARVALWCVEANPVVRPTMHQVVQMLEGGVADADAVPPAPDPPGGCLHSSPLIPMANKVE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0294800 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g34610 | SBH | 0.0 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0294800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0002220 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0002240 | SBH | 0.0 | 0.738476 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0015280 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0015780 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0322900 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0016010 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0309600 | RBH | 0.0195395 | 0.1429765 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0002110 | SBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0015930 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0015570 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0015360 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0015670 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G015480 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0017320 | SBH | 0.0 | 0.0 | 0.0 |
