Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_11g0002890 | OGI:11006740 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr11:2032531-2035690 | ||||||||
| Gene Symbol | CPD1, OsCPD1, CYP90A3, CYP90A3/OsCPD1 | ||||||||||
| DNA seq | agccatataaacgacaagatgataggactagctaagtactactagtacacaacaaaatgttgcttgtaaccggtatccacagcattttaggtcattttacaagcagcacaactctgctgcctactgtttacataccaagttacagatcaacAaaaaagagggaaatgcactacctatgcgagaactatttttctataattttttctatgtttagtctttcttccaagataagagcagctgcaaaacgacctaacgtcagcaaattgattctgaaagcagcCGaagattgatagggtatcctttgagagttcgtgtggtggggaagaagacaagtctatcttcttcggtttcttcccagctgcaaattcattggtcaagttgttatggaatcagactggtgcccaatttggatcacaatgtggaaaatccatttgcagattatctacacctttctggctagcaagatagcgattgaatttgagagattaaggtggcttacctaaagcgcgttacaagatgatggaggaagatagaaacgacaacccgggcaagctcatagccaggacacaaccGGggtccaccgccaaatggagtAaatatattggcccctaccgcattctgaagtttattgttgatctgcacaggaacaaatttgttgcagatagcttcagcgtgaattttacttttgtagcacaggacataattgaataagtagacccaatagcaataacacagagcccctaggagtacctgccatctccaagggttaaatgtccgagcattctcgtagtgttcattattaaggtgcacagctcggaatgaagcaaaaatcttgcatccctttggaattgtgtaatctaagaaacaaagAaaaatgccatacataatgagcatttctgatgaaaaatgtatggggatttcttttagataatgaataaaatgtacgtggacttagtatagtttatattgaaatacctttataatgaatatcagtgtttgctcgcctgaatactccactaataatgttacccacacggagtgtctcatttatcacctgcagaaatgttaacccttcatttaatcatgatgtgagtaaaccaactgtaccgtttcaaaggttcagttaagagatgccatttacactagatggattcgtgctgttggcatgatatttttaggagtagctaatttttaagaaaacaaGGgctttccaacttacacattgagtaaatggcatggacttgtaatcgctccactctagtggttgttttttccctttcatatccctgatattggcatgctcttcctgtaaaatcagcaggatatctggaatcagttacacatgtagtgaagtaaaaaataccacttggaccaatcttgaggactctcaaagcttaacatattggaaacaaaacttgtaccaggaaaagtcatgaagttcagatttctaagatttggacctattgtgatattattgctacgattctctcgctttgttgttagactgaggaacctagcactcatcaatgcaagtaaatAaaatgagaaaaaaataaaatgaggaaaccagagtactgactgaactgaagattcattcttacacagttaaactaaaagaagtcaggactcaagaacataaatggttcgagtcaataataaattaatactcaggatcaagtattcaagtcaataacaaaccaggaacaaagctgtagtgaacttgactaaaaacaacagaccggaaatagaaagtagAaacttctcttttggacagaattggtgtgaaagatagtctaacaaccatatttttaacaattaacactcaactataataaatgaaattcctccctatttcaggcgttatttgacaattgacagcacctggtacctactaccgcacgtgtatacaagaattgacaattactaccaaacaactaatttaaatagttttataccttgagctcagctagcgcagcaggcgtctcagtgaggaacttgaccgcgagcgtcatgagcatggacgtagtctcatacccagccaccagcagagaaaggcagaaatccaccatctcttcctccgagaagctgccatccgctcagaagctctcaaccatctcctcttcttctccttcttcccctcatcatccccaatggagccaccattctccgctttctcctccatcctcttctttatcacctcccgcagtgcaccggccaccttcttcctcgcctgcaggaatcaaatcatgcaatgccacatttttatgagagatataagagtacatcaatagctgacgccaattcgttgtaaggcaatgtaagatgcatagggaaagattAaaaaaaatgaatggaggcaaaagaacgagcaccttgagggcctggccgtaggtggtaaaagggaggaggttggcgagaggaaaggggatggagaagaagccgtcgatgagcttgacgtactcgcggcggaggctctcggtccacggtcccggctcgatgctgacgagctgcttgacggtgaggttgaaggtgattttcttggcctcgtccatgaggcgcacggtggcggcgggctcccactggcgcatggtggcgagcacgaggcggtcgatgtgcgcgaggaggggcggcgacgcggggcggccgaggcgggtgagggtgagggagtggagccgcttgtgcgcggcgccgcgggtgaggagcagggagcgcgcgccgaggagcgtggcgatggaggacgggtagctggagtggacggcgcggccctcggcggcgaggaggaggcggttgaaggccgggtcggcggagaacacggtgcgctcgccgaagacgtgggtggtgaacacgccgccgtggcgcgccacgcgctcgtcgatgaacggctccgggttgggcgtcttgtacgccgagatgagccgcagcgtctcgccaatcagcggcaggCccgtgctccccggcggcatcagcgccctcttccccagcctcccggcggcggggcccccgaggaggaggagccatctgagcaccatggcaaccacgacgatggcggcggccgcggcgaggaggagcagcgcggccgcggccatggcggcgtgggcgtgcgcggcgtgggcaaggagcgagtgagattgatgaggctccgacaaccagaggatctgct
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| CDS seq | atggccgcggccgcgctgctcctcctcgccgcggccgccgccatcgtcgtggttgccatggtgctcagatggctcctcctcctcgggggccccgccgccgggaggctggggaagagggcgctgatgccgccggggagcacggGcctgccgctgattggcgagacgctgcggctcatctcggcgtacaagacgcccaacccggagccgttcatcgacgagcgcgtggcgcgccacggcggcgtgttcaccacccacgtcttcggcgagcgcaccgtgttctccgccgacccggccttcaaccgcctcctcctcgccgccgagggccgcgccgtccactccagctacccgtcctccatcgccacgctcctcggcgcgcgctccctgctcctcacccgcggcgccgcgcacaagcggctccactccctcaccctcacccgcctcggccgccccgcgtcgccgcccctcctcgcgcacatcgaccgcctcgtgctcgccaccatgcgccagtgggagcccgccgccaccgtgcgcctcatggacgaggccaagaaaatcaccttcaacctcaccgtcaagcagctcgtcagcatcgagccgggaccgtggaccgagagcctccgccgcgagtacgtcaagctcatcgacggcttcttctccatcccctttcctctcgccaacctcctcccttttaccacctacggccaggccctcaaggcgaggaagaaggtggccggtgcactgcgggaggtgataaagaagaggatggaggagaaagcggagaatggtggctccattggggatgatgaggggaagaaggagaagaagaggagatgcttctcggaggaagagatggtggatttctgcctttctctgctggtggctgggtatgagactacgtccatgctcatgacgctcgcggtcaagttcctcactgagacgcctgctgcgctagctgagctcaaggaagagcatgccaatatcagggatatgaaagggaaaaaacaaccactagagtggagcgattacaagtccatgccatttactcaatgtgtgataaatgagacactccgtgtgggtaacattattagtggagtattcaggcgagcaaacactgatattcattataaagattacacaattccaaagggatgcaagatttttgcttcattccgagctgtgcaccttaataatgaacactacgagaatgctcggacatttaacccttggagatggcagatcaacaataaacttcagaatgcggtaggggccaatatattTactccatttggcggtggaccCCggttgtgtcctggctatgagcttgcccgggttgtcgtttctatcttcctccatcatcttgtaacgcgctttagctgggaagaaaccgaagaagatagacttgtcttcttccccaccacacgaactctcaaaggataccctatcaatcttCGgctgctttcagaatcaatttgctga
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| Protein seq | MAAAALLLLAAAAAIVVVAMVLRWLLLLGGPAAGRLGKRALMPPGSTGLPLIGETLRLISAYKTPNPEPFIDERVARHGGVFTTHVFGERTVFSADPAFNRLLLAAEGRAVHSSYPSSIATLLGARSLLLTRGAAHKRLHSLTLTRLGRPASPPLLAHIDRLVLATMRQWEPAATVRLMDEAKKITFNLTVKQLVSIEPGPWTESLRREYVKLIDGFFSIPFPLANLLPFTTYGQALKARKKVAGALREVIKKRMEEKAENGGSIGDDEGKKEKKRRCFSEEEMVDFCLSLLVAGYETTSMLMTLAVKFLTETPAALAELKEEHANIRDMKGKKQPLEWSDYKSMPFTQCVINETLRVGNIISGVFRRANTDIHYKDYTIPKGCKIFASFRAVHLNNEHYENARTFNPWRWQINNKLQNAVGANIFTPFGGGPRLCPGYELARVVVSIFLHHLVTRFSWEETEEDRLVFFPTTRTLKGYPINLRLLSESIC |
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| Function | Cytochrome P450 90A3 [UniProtKB/Swiss-Prot:Q2RAP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_11g0002890 | OsKeNa_11g0002890.01 | Chr11 | 2032531 | 2035690 | - | NAM | ||
| CDS seq | atggccgcggccgcgctgctcctcctcgccgcggccgccgccatcgtcgtggttgccatggtgctcagatggctcctcctcctcgggggccccgccgccgggaggctggggaagagggcgctgatgccgccggggagcacggGcctgccgctgattggcgagacgctgcggctcatctcggcgtacaagacgcccaacccggagccgttcatcgacgagcgcgtggcgcgccacggcggcgtgttcaccacccacgtcttcggcgagcgcaccgtgttctccgccgacccggccttcaaccgcctcctcctcgccgccgagggccgcgccgtccactccagctacccgtcctccatcgccacgctcctcggcgcgcgctccctgctcctcacccgcggcgccgcgcacaagcggctccactccctcaccctcacccgcctcggccgccccgcgtcgccgcccctcctcgcgcacatcgaccgcctcgtgctcgccaccatgcgccagtgggagcccgccgccaccgtgcgcctcatggacgaggccaagaaaatcaccttcaacctcaccgtcaagcagctcgtcagcatcgagccgggaccgtggaccgagagcctccgccgcgagtacgtcaagctcatcgacggcttcttctccatcccctttcctctcgccaacctcctcccttttaccacctacggccaggccctcaaggcgaggaagaaggtggccggtgcactgcgggaggtgataaagaagaggatggaggagaaagcggagaatggtggctccattggggatgatgaggggaagaaggagaagaagaggagatgcttctcggaggaagagatggtggatttctgcctttctctgctggtggctgggtatgagactacgtccatgctcatgacgctcgcggtcaagttcctcactgagacgcctgctgcgctagctgagctcaaggaagagcatgccaatatcagggatatgaaagggaaaaaacaaccactagagtggagcgattacaagtccatgccatttactcaatgtgtgataaatgagacactccgtgtgggtaacattattagtggagtattcaggcgagcaaacactgatattcattataaagattacacaattccaaagggatgcaagatttttgcttcattccgagctgtgcaccttaataatgaacactacgagaatgctcggacatttaacccttggagatggcagatcaacaataaacttcagaatgcggtaggggccaatatattTactccatttggcggtggaccCCggttgtgtcctggctatgagcttgcccgggttgtcgtttctatcttcctccatcatcttgtaacgcgctttagctgggaagaaaccgaagaagatagacttgtcttcttccccaccacacgaactctcaaaggataccctatcaatcttCGgctgctttcagaatcaatttgctga
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| Protein seq | MAAAALLLLAAAAAIVVVAMVLRWLLLLGGPAAGRLGKRALMPPGSTGLPLIGETLRLISAYKTPNPEPFIDERVARHGGVFTTHVFGERTVFSADPAFNRLLLAAEGRAVHSSYPSSIATLLGARSLLLTRGAAHKRLHSLTLTRLGRPASPPLLAHIDRLVLATMRQWEPAATVRLMDEAKKITFNLTVKQLVSIEPGPWTESLRREYVKLIDGFFSIPFPLANLLPFTTYGQALKARKKVAGALREVIKKRMEEKAENGGSIGDDEGKKEKKRRCFSEEEMVDFCLSLLVAGYETTSMLMTLAVKFLTETPAALAELKEEHANIRDMKGKKQPLEWSDYKSMPFTQCVINETLRVGNIISGVFRRANTDIHYKDYTIPKGCKIFASFRAVHLNNEHYENARTFNPWRWQINNKLQNAVGANIFTPFGGGPRLCPGYELARVVVSIFLHHLVTRFSWEETEEDRLVFFPTTRTLKGYPINLRLLSESIC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.335078 | 0.000000 | 0.946108 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0143200 | RBH | 0.138876 | 0.589741 | 0.339429 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g04710 | RBH | 0.090467 | 0.400938 | 0.084168 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0143200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0002830 | RBH | 0.0 | 0.0 | 1.555276 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0002880 | RBH | 0.129176 | 4.586803 | 1.691222 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0002850 | RBH | 0.0 | 1.375888 | 1.262857 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0002810 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0002920 | SBH | 2.024029 | 11.755780 | 2.752731 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0038000 | RBH | 2.365024 | 2.213318 | 0.701211 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0002900 | RBH | 0.0 | 0.174725 | 0.162705 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0036400 | RBH | 1.821071 | 1.3567845 | 2.227488 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0002780 | RBH | 0.0 | 0.132435 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0002920 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0002900 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0002830 | RBH | 0.783826 | 0.0 | 0.127342 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0002910 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G002830 | RBH | 0.0 | 0.000000 | 0.706691 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0002840 | RBH | 0.000000 | 0.0 | 0.000000 |
