Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_10g0001860 | OGI:10008390 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr10:2583539-2586362 | ||||||||
| Gene Symbol | Gnk2RLK-7 | ||||||||||
| DNA seq | tcagtaattaatggtcacatcattgatagtactacatgttcctacagtggatgattcatcattttttgtcacccttacatggaaatatgctggatgcttaggctcatcaaggaccatactctcactacttagcattgcaacaacatttgacatggtcggtcgatcaactgcattctcttgtacacacaacaacacaatgttaatgcacctcaacatacacgatgactgccaatttgtaaccaatgatgcatcaagaagttcaagccatctttcctctgaccacaacttccatgcctatttcaatatttcaacagacagtataggtaagataccaaataaacaaaacaatctacacactttacatgtgtccaagaactcacatatccaaggagattgatgaagtcttcacattgatctaaactggcatttctttttccgctaatgatctcgagaattataacgccaaagctgaatacatcagattttggagagaagaggccctcggaagaatactctggagccatgtaaccactaaaaatgatatacaatatttgtcaaattttgttcgtgcttgaattataatgaaaaatatgttcaaatttctatgatacttactaggtcccaaccactcttctggtagttccttcattgctatttgagccaaatatttttgctagcccgaaatctgaaattttggggttcatttcgctgtccaagagaatgttacttggcttaaggtctcgatgaatcacacgcaatcgggagtgcttatgtagataaagcagtccttgtgctattccttcgattatcactagacgtttgttccaatctagtaaatcttttttcctttcatctgcacaaaaattatatattagtacaacaggaaaaggagatagacacctcaacaaaatactgatgggaaaattttccaaattttcctcaataaataaacctaagttcaggaatctagatatataccgaaaatatagaagtccaaacttttgtttggcaagtattcatagaccaatattttctcctctccttgagagcagcatcccaagagcctaactaaattcctgtgctggagtttggcaattagttggacttcatttttgaactctaggaaaccttgtcctgaatgtgaagcaagtctcttaactgctatctccaatccctcagaaaacaggccctgaaacaaatattcagaaatttttcattgtgattatcatgggatctatggtagtatgcagttttttttatacgaatctatataatgagaatttgcatatcattcttttgtattattaatcagacaatgaaagattatactccacatgtgtcttatttaccttatatacagggccaaatccaccttctccaagtttgttttcttcagaaaagttatctgtagccttgataacctcacgaaactcgaaaaccgaaaactctgaaatctctccctccatttcgcaaattagttcatctcctcggaacctgcgactacgcttttctcgcaatctcactctatctggataattgagaattagtgcagattcattactcttagttaacaatataacgaacataacaatttgagatgaacatttcagcggcaataaacacaccttttctgaaccttcttgaccaacgacagtagtaacagacgatcaagcagagaactactgccgctacaggagctgcaatagcagcaattacccatgatttgctcttctttcctaaattaaagaacccacgatcaaatttaacatgtcaattaacggcatatttgcaaataaaaaataatttatgaataaaaaatgtatatacgtgttcttagcaatctaaaaacaaaggctgaaaaataaacttcgataaaaaaaactctaaaatcaactctaaatttacggttgaaaatttaaattttggctggtaagcatagcataagtattcagagtgaaaattatatatttacagaggaaaaaaagcagaattttcagatactgaaaaagagggggagtttttacgcactgtttttggtcggagcgatggaatccggcgccggagttgagcccggcgggctgacacgccgcgtgggctcgccggcgtagaagacaaaggcctcgaacctgagattgcaccggagcaagaggacgcgtcctcccaagcgcacggaggtggtggagttcaccatggcgatgaggcgctggaggcaagccaggcagtcgccggcggccaagtccggcgtgcactgcgccagcgagtagagcgtctgcttcgactcgctgctgccgtccatgaagcctgtggcgaaccgcctcgccgccgccgccgccgtccgggccgtcaccgtcagcagctcgcggacgttggcggcggcgacggcggcgtcgccggtgatgttctgctggttccatgcctggaagagcgtggcgttctccgtgatgttgggcgcggcgaggaagtcgtcgccggcgaagcggaggaggcagtcgtcgtagtagatggtcgccgacttgtcgctcgggcacgtccgccgcgcgtcctggaacgaggccgcgacgcagtcgccgcaggcggtggcgttggcgacgtcgccgcggcagagcgcgagcgcgtacgccgcgtcgggggcctggccggcggtggccgtggcgaagtggtccggggaggaggaggcgttgctcgggagggcggcggcgaggcgcgcgaggttggactggtaggtgccgttggccgtgtagttgccgccgttgccgcagagctgcgccagtagttcgccggcggcgagcggcatgatgctaaggaggagcaggacgccgaccat
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| CDS seq | atggtcggcgtcctgctcctccttagcatcatgccgctcgccgccggcgaactactggcgcagctctgcggcaacggcggcaactacacggccaacggcacctaccagtccaacctcgcgcgcctcgccgccgccctcccgagcaacgcctcctcctccccggaccacttcgccacggccaccgccggccaggcccccgacgcggcgtacgcgctcgcgctctgccgcggcgacgtcgccaacgccaccgcctgcggcgactgcgtcgcggcctcgttccaggacgcgcggcggacgtgcccgagcgacaagtcggcgaccatctactacgacgactgcctcctccgcttcgccggcgacgacttcctcgccgcgcccaacatcacggagaacgccacgctcttccaggcatggaaccagcagaacatcaccggcgacgccgccgtcgccgccgccaacgtccgcgagctgctgacggtgacggcccggacggcggcggcggcggcgaggcggttcgccacaggcttcatggacggcagcagcgagtcgaagcagacgctctactcgctggcgcagtgcacgccggacttggccgccggcgactgcctggcttgcctccagcgcctcatcgccatggtgaactccaccacctccgtgcgcttgggaggacgcgtcctcttgctccggtgcaatctcaggttcgaggcctttgtcttctacgccggcgagcccacgcggcgtgtcagcccgccgggctcaactccggcgccggattccatcgctccgaccaaaaacaatagagtgagattgcgagaaaagcgtagtcgcaggttccgaggagatgaactaatttgcgaaatggagggagagatttcagagttttcggttttcgagtttcgtgaggttatcaaggctacagataacttttctgaagaaaacaaacttggagaaggtggatttggccctgtatataagggcctgttttctgagggattggagatagcagttaagagacttgcttcacattcaggacaaggtttcctagagttcaaaaatgaagtccaactaattgccaaactccagcacaggaatttagttaggctcttgggatgctgctctcaaggagaggagaaaatattggtctatgaatacttgccaaacaaaagtttggacttctatattttcgatgaaaggaaaaaagatttactagattggaacaaacgtctagtgataatcgaaggaatagcacaaggactgctttatctacataagcactcccgattgcgtgtgattcatcgagaccttaagccaagtaacattctcttggacagcgaaatgaaccccaaaatttcagatttcgggctagcaaaaatatttggctcaaatagcaatgaaggaactaccagaagagtggttgggacctatggttacatggctccagagtattcttccgagggcctcttctctccaaaatctgatgtattcagctttggcgttataattctcgagatcattagcggaaaaagaaatgccagtttagatcaatgtgaagacttcatcaatctccttggatatgcatggaagttgtggtcagaggaaagatggcttgaacttcttgatgcatcattggttacaaattggcagtcatcgtgtatgttgaggtgcattaacattgtgttgttgtgtgtacaagagaatgcagttgatcgaccgaccatgtcaaatgttgttgcaatgctaagtagtgagagtatggtccttgatgagcctaagcatccagcatatttccatgtaagggtgacaaaaaatgatgaatcatccactgtaggaacatgtagtactatcaatgatgtgaccattaattactga
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| Protein seq | MVGVLLLLSIMPLAAGELLAQLCGNGGNYTANGTYQSNLARLAAALPSNASSSPDHFATATAGQAPDAAYALALCRGDVANATACGDCVAASFQDARRTCPSDKSATIYYDDCLLRFAGDDFLAAPNITENATLFQAWNQQNITGDAAVAAANVRELLTVTARTAAAAARRFATGFMDGSSESKQTLYSLAQCTPDLAAGDCLACLQRLIAMVNSTTSVRLGGRVLLLRCNLRFEAFVFYAGEPTRRVSPPGSTPAPDSIAPTKNNRVRLREKRSRRFRGDELICEMEGEISEFSVFEFREVIKATDNFSEENKLGEGGFGPVYKGLFSEGLEIAVKRLASHSGQGFLEFKNEVQLIAKLQHRNLVRLLGCCSQGEEKILVYEYLPNKSLDFYIFDERKKDLLDWNKRLVIIEGIAQGLLYLHKHSRLRVIHRDLKPSNILLDSEMNPKISDFGLAKIFGSNSNEGTTRRVVGTYGYMAPEYSSEGLFSPKSDVFSFGVIILEIISGKRNASLDQCEDFINLLGYAWKLWSEERWLELLDASLVTNWQSSCMLRCINIVLLCVQENAVDRPTMSNVVAMLSSESMVLDEPKHPAYFHVRVTKNDESSTVGTCSTINDVTINY |
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| Function | Cysteine-rich receptor-like protein kinase 10 [UniProtKB/Swiss-Prot:Q8GYA4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_10g0001860 | OsKeNa_10g0001860.01 | Chr10 | 2583539 | 2586362 | - | NAM | ||
| CDS seq | atggtcggcgtcctgctcctccttagcatcatgccgctcgccgccggcgaactactggcgcagctctgcggcaacggcggcaactacacggccaacggcacctaccagtccaacctcgcgcgcctcgccgccgccctcccgagcaacgcctcctcctccccggaccacttcgccacggccaccgccggccaggcccccgacgcggcgtacgcgctcgcgctctgccgcggcgacgtcgccaacgccaccgcctgcggcgactgcgtcgcggcctcgttccaggacgcgcggcggacgtgcccgagcgacaagtcggcgaccatctactacgacgactgcctcctccgcttcgccggcgacgacttcctcgccgcgcccaacatcacggagaacgccacgctcttccaggcatggaaccagcagaacatcaccggcgacgccgccgtcgccgccgccaacgtccgcgagctgctgacggtgacggcccggacggcggcggcggcggcgaggcggttcgccacaggcttcatggacggcagcagcgagtcgaagcagacgctctactcgctggcgcagtgcacgccggacttggccgccggcgactgcctggcttgcctccagcgcctcatcgccatggtgaactccaccacctccgtgcgcttgggaggacgcgtcctcttgctccggtgcaatctcaggttcgaggcctttgtcttctacgccggcgagcccacgcggcgtgtcagcccgccgggctcaactccggcgccggattccatcgctccgaccaaaaacaatagagtgagattgcgagaaaagcgtagtcgcaggttccgaggagatgaactaatttgcgaaatggagggagagatttcagagttttcggttttcgagtttcgtgaggttatcaaggctacagataacttttctgaagaaaacaaacttggagaaggtggatttggccctgtatataagggcctgttttctgagggattggagatagcagttaagagacttgcttcacattcaggacaaggtttcctagagttcaaaaatgaagtccaactaattgccaaactccagcacaggaatttagttaggctcttgggatgctgctctcaaggagaggagaaaatattggtctatgaatacttgccaaacaaaagtttggacttctatattttcgatgaaaggaaaaaagatttactagattggaacaaacgtctagtgataatcgaaggaatagcacaaggactgctttatctacataagcactcccgattgcgtgtgattcatcgagaccttaagccaagtaacattctcttggacagcgaaatgaaccccaaaatttcagatttcgggctagcaaaaatatttggctcaaatagcaatgaaggaactaccagaagagtggttgggacctatggttacatggctccagagtattcttccgagggcctcttctctccaaaatctgatgtattcagctttggcgttataattctcgagatcattagcggaaaaagaaatgccagtttagatcaatgtgaagacttcatcaatctccttggatatgcatggaagttgtggtcagaggaaagatggcttgaacttcttgatgcatcattggttacaaattggcagtcatcgtgtatgttgaggtgcattaacattgtgttgttgtgtgtacaagagaatgcagttgatcgaccgaccatgtcaaatgttgttgcaatgctaagtagtgagagtatggtccttgatgagcctaagcatccagcatatttccatgtaagggtgacaaaaaatgatgaatcatccactgtaggaacatgtagtactatcaatgatgtgaccattaattactga
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| Protein seq | MVGVLLLLSIMPLAAGELLAQLCGNGGNYTANGTYQSNLARLAAALPSNASSSPDHFATATAGQAPDAAYALALCRGDVANATACGDCVAASFQDARRTCPSDKSATIYYDDCLLRFAGDDFLAAPNITENATLFQAWNQQNITGDAAVAAANVRELLTVTARTAAAAARRFATGFMDGSSESKQTLYSLAQCTPDLAAGDCLACLQRLIAMVNSTTSVRLGGRVLLLRCNLRFEAFVFYAGEPTRRVSPPGSTPAPDSIAPTKNNRVRLREKRSRRFRGDELICEMEGEISEFSVFEFREVIKATDNFSEENKLGEGGFGPVYKGLFSEGLEIAVKRLASHSGQGFLEFKNEVQLIAKLQHRNLVRLLGCCSQGEEKILVYEYLPNKSLDFYIFDERKKDLLDWNKRLVIIEGIAQGLLYLHKHSRLRVIHRDLKPSNILLDSEMNPKISDFGLAKIFGSNSNEGTTRRVVGTYGYMAPEYSSEGLFSPKSDVFSFGVIILEIISGKRNASLDQCEDFINLLGYAWKLWSEERWLELLDASLVTNWQSSCMLRCINIVLLCVQENAVDRPTMSNVVAMLSSESMVLDEPKHPAYFHVRVTKNDESSTVGTCSTINDVTINY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.068735 | 0.0 | 0.170702 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0136400 | RBH | 1.354215 | 1.385467 | 0.299617 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g04720 | RBH | 0.968252 | 0.927962 | 0.076282 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0136400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0001890 | RBH | 0.0 | 0.0 | 0.339330 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0001840 | RBH | 0.000000 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0001810 | RBH | 0.037533 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0001750 | RBH | 0.587063 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0039300 | RBH | 1.264916 | 0.0113085 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0001930 | RBH | 0.050951 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0043700 | RBH | 0.0151205 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0001770 | RBH | 0.175886 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0001830 | RBH | 0.095733 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0001900 | RBH | 2.455467 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0001740 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0001890 | RBH | 0.062173 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G001860 | RBH | 0.206403 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0001760 | RBH | 0.368775 | 0.0 | 0.973097 |
