Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_10g0000620 | OGI:10004080 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr10:1213373-1215635 | ||||||||
| Gene Symbol | WAK98, OsWAK98, OsRLCK287, RLCK287 | ||||||||||
| DNA seq | aacattgaacatgaattttctatatccactagtagaaccaagttcagataaacatcatgggatcgaccgcataagaagcagattgcatgcaagttcagataacatcatccgaatggcagcatatattgcaagatgttctggtaacaaataatatattacaattcacacacaatgcttgtacacgatcacttagagtgaaccaagtgtactgtcaagttcagttccttgatcagctctagtgatatatatgagatttaattagttaccagtgaagctccatcggatgtgcaattattcttccaacatctccgaatgatccgaaggtgttgtgccacttttttcattgttggtctttgatctatttccaaacaaatacacttgagcaatagcttccctatctcttcgaggagagcaacatcttcgctacgagttgtgatatcatcgtcgaaaaatgcccttccactgttatctgccttgtaagctgcaaggaattgcgagacaaggtgttcgtgatccgcataaaacacaaagttcttcctactaatgagcgtcaagacaagaacaccaaactgatacacatcggttttcagttttagtgacacacagtacttatcatgatcatgaattgcgctgtcatcattgttgagcctctgcgcccatgagaatcccgtcagctttggcgtgaaactgtcatcaacaagtgtcttggatggtgcaacatagccatgtctgatcataccagctgctgaggaatggaggtactctaatgcttctgctgtctcaactgcgatcttcacgcgtaaatgcagtgggaaatcttcacggccatctagaatgtcagagagggttcctctagcagcatactcgtacacaaatgcgggacaatcagcattcaagcagtaacccaagagtctgatgatgttcttgtggacaatttgagataggatcatccctccgttgataaacgcctcttcgaaaccctcaagtacctcggaaaatatcctcaccgctaccactgtattgtcctcaagcgttcctttgtaaaccttacccgaagtacctccactgagtagacacgagtaattctgtgtgatttcatttagctcctcctgtgtgaaaattctcatattgccgagtcccaataggatcttagaagaattgctaagatttctcttgaaaatgctcaaactcttcttcagttgcatcctagaattatagctcggcccctggttgtcattttttcgccatgagcggtgtgatgccaaaatgtgttctgagtatcttccatgcatgtcttttaattcttttttaagtgtacgaaggcgttttgccacaacattcatttgaggacgtttatgaatgtccagtgttaggcattcaattgccaatttcctcatttcttttagaatcttcatattgctccggtttgctatctcagcatcaaatatttctccacctccaatgaggttaatgttaccttttcttaccctttttcgagctattagttccaagagaaccattccaaaactataaacatcactcctcggagtaaggcaaccctcatgaaagtatataggatccatgtaagatacgcttccttttatatgtacagtgtactgagtgacaccacctgaaagaagccttgacactccaaagtctgacaatttcgatgtcagattgctatctagaagtatgttggcaggcttaatatcaccatgacaaataagactgccattcgataaatgcatcgaatgcatgtagctcaatgcgtccgcacatcctatagcaatacctagccttacatccaaagggatggaaatgtcactgttgtggagtatgtcatcaaggtttcctttggagatatacttagtaacaatcattagagtactttctccaatgcaatagcctatgagctccaccacatttctgtgactcatttgactatggatgcttacttcttccataaactctttccttaaatctttgctgatatatctcttcaccgcaacaagatcatagtcatcatcaagagtccctttatacacttctccaaagccgccttgtccgatcggaatgctgaagttgctagtaatccgtttaatctcatcttccgtgaaaaccttaatattctgattgatgtctactttgaacttcaacttatcatagcattgtgtgatatttccagtcataatcttattttctgcaagctatgtcatataccaacattacagatccctcaatgttgaccaccctgtctctgcca
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| CDS seq | atgactggaaatatcacacaatgctatgataagttgaagttcaaagtagacatcaatcagaatattaaggttttcacggaagatgagattaaacggattactagcaacttcagcattccgatcggacaaggcggctttggagaagtgtataaagggactcttgatgatgactatgatcttgttgcggtgaagagatatatcagcaaagatttaaggaaagagtttatggaagaagtaagcatccatagtcaaatgagtcacagaaatgtggtggagctcataggctattgcattggagaaagtactctaatgattgttactaagtatatctccaaaggaaaccttgatgacatactccacaacagtgacatttccatccctttggatgtaaggctaggtattgctataggatgtgcggacgcattgagctacatgcattcgatgcatttatcgaatggcagtcttatttgtcatggtgatattaagcctgccaacatacttctagatagcaatctgacatcgaaattgtcagactttggagtgtcaaggcttctttcaggtggtgtcactcagtacactgtacatataaaaggaagcgtatcttacatggatcctatatactttcatgagggttgccttactccgaggagtgatgtttatagttttggaatggttctcttggaactaatagctcgaaaaagggtaagaaaaggtaacattaacctcattggaggtggagaaatatttgatgctgagatagcaaaccggagcaatatgaagattctaaaagaaatgaggaaattggcaattgaatgcctaacactggacattcataaacgtcctcaaatgaatgttgtggcaaaacgccttcgtacacttaaaaaagaattaaaagacatgcatggaagatactcagaacacattttggcatcacaccgctcatggcgaaaaaatgacaaccaggggccgagctataattctaggatgcaactgaagaagagtttgagcattttcaagagaaatcttagcaattcttctaagatcctattgggactcggcaatatgagaattttcacacaggaggagctaaatgaaatcacacagaattactcgtgtctactcagtggaggtacttcgggtaaggtttacaaaggaacgcttgaggacaatacagtggtagcggtgaggatattttccgaggtacttgagggtttcgaagaggcgtttatcaacggagggatgatcctatctcaaattgtccacaagaacatcatcagactcttgggttactgcttgaatgctgattgtcccgcatttgtgtacgagtatgctgctagaggaaccctctctgacattctagatggccgtgaagatttcccactgcatttacgcgtgaagatcgcagttgagacagcagaagcattagagtacctccattcctcagcagctggtatgatcagacatggctatgttgcaccatccaagacacttgttgatgacagtttcacgccaaagctgacgggattctcatgggcgcagaggctcaacaatgatgacagcgcaattcatgatcatgataagtactgtgtgtcactaaaactgaaaaccgatgtgtatcagtttggtgttcttgtcttgacgctcattagtaggaagaactttgtgttttatgcggatcacgaacaccttgtctcgcaattccttgcagcttacaaggcagataacagtggaagggcatttttcgacgatgatatcacaactcgtagcgaagatgttgctctcctcgaagagatagggaagctattgctcaagtgtatttgtttggaaatagatcaaagaccaacaatgaaaaaagtggcacaacaccttcggatcattcggagatgttggaagaataattgcacatccgatggagcttcactggtaactaattaa
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| Protein seq | MTGNITQCYDKLKFKVDINQNIKVFTEDEIKRITSNFSIPIGQGGFGEVYKGTLDDDYDLVAVKRYISKDLRKEFMEEVSIHSQMSHRNVVELIGYCIGESTLMIVTKYISKGNLDDILHNSDISIPLDVRLGIAIGCADALSYMHSMHLSNGSLICHGDIKPANILLDSNLTSKLSDFGVSRLLSGGVTQYTVHIKGSVSYMDPIYFHEGCLTPRSDVYSFGMVLLELIARKRVRKGNINLIGGGEIFDAEIANRSNMKILKEMRKLAIECLTLDIHKRPQMNVVAKRLRTLKKELKDMHGRYSEHILASHRSWRKNDNQGPSYNSRMQLKKSLSIFKRNLSNSSKILLGLGNMRIFTQEELNEITQNYSCLLSGGTSGKVYKGTLEDNTVVAVRIFSEVLEGFEEAFINGGMILSQIVHKNIIRLLGYCLNADCPAFVYEYAARGTLSDILDGREDFPLHLRVKIAVETAEALEYLHSSAAGMIRHGYVAPSKTLVDDSFTPKLTGFSWAQRLNNDDSAIHDHDKYCVSLKLKTDVYQFGVLVLTLISRKNFVFYADHEHLVSQFLAAYKADNSGRAFFDDDITTRSEDVALLEEIGKLLLKCICLEIDQRPTMKKVAQHLRIIRRCWKNNCTSDGASLVTN |
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| Function | Wall-associated receptor kinase 1 [UniProtKB/Swiss-Prot:Q39191] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_10g0000620 | OsKeNa_10g0000620.01 | Chr10 | 1213373 | 1215635 | - | NAM | ||
| CDS seq | atgactggaaatatcacacaatgctatgataagttgaagttcaaagtagacatcaatcagaatattaaggttttcacggaagatgagattaaacggattactagcaacttcagcattccgatcggacaaggcggctttggagaagtgtataaagggactcttgatgatgactatgatcttgttgcggtgaagagatatatcagcaaagatttaaggaaagagtttatggaagaagtaagcatccatagtcaaatgagtcacagaaatgtggtggagctcataggctattgcattggagaaagtactctaatgattgttactaagtatatctccaaaggaaaccttgatgacatactccacaacagtgacatttccatccctttggatgtaaggctaggtattgctataggatgtgcggacgcattgagctacatgcattcgatgcatttatcgaatggcagtcttatttgtcatggtgatattaagcctgccaacatacttctagatagcaatctgacatcgaaattgtcagactttggagtgtcaaggcttctttcaggtggtgtcactcagtacactgtacatataaaaggaagcgtatcttacatggatcctatatactttcatgagggttgccttactccgaggagtgatgtttatagttttggaatggttctcttggaactaatagctcgaaaaagggtaagaaaaggtaacattaacctcattggaggtggagaaatatttgatgctgagatagcaaaccggagcaatatgaagattctaaaagaaatgaggaaattggcaattgaatgcctaacactggacattcataaacgtcctcaaatgaatgttgtggcaaaacgccttcgtacacttaaaaaagaattaaaagacatgcatggaagatactcagaacacattttggcatcacaccgctcatggcgaaaaaatgacaaccaggggccgagctataattctaggatgcaactgaagaagagtttgagcattttcaagagaaatcttagcaattcttctaagatcctattgggactcggcaatatgagaattttcacacaggaggagctaaatgaaatcacacagaattactcgtgtctactcagtggaggtacttcgggtaaggtttacaaaggaacgcttgaggacaatacagtggtagcggtgaggatattttccgaggtacttgagggtttcgaagaggcgtttatcaacggagggatgatcctatctcaaattgtccacaagaacatcatcagactcttgggttactgcttgaatgctgattgtcccgcatttgtgtacgagtatgctgctagaggaaccctctctgacattctagatggccgtgaagatttcccactgcatttacgcgtgaagatcgcagttgagacagcagaagcattagagtacctccattcctcagcagctggtatgatcagacatggctatgttgcaccatccaagacacttgttgatgacagtttcacgccaaagctgacgggattctcatgggcgcagaggctcaacaatgatgacagcgcaattcatgatcatgataagtactgtgtgtcactaaaactgaaaaccgatgtgtatcagtttggtgttcttgtcttgacgctcattagtaggaagaactttgtgttttatgcggatcacgaacaccttgtctcgcaattccttgcagcttacaaggcagataacagtggaagggcatttttcgacgatgatatcacaactcgtagcgaagatgttgctctcctcgaagagatagggaagctattgctcaagtgtatttgtttggaaatagatcaaagaccaacaatgaaaaaagtggcacaacaccttcggatcattcggagatgttggaagaataattgcacatccgatggagcttcactggtaactaattaa
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| Protein seq | MTGNITQCYDKLKFKVDINQNIKVFTEDEIKRITSNFSIPIGQGGFGEVYKGTLDDDYDLVAVKRYISKDLRKEFMEEVSIHSQMSHRNVVELIGYCIGESTLMIVTKYISKGNLDDILHNSDISIPLDVRLGIAIGCADALSYMHSMHLSNGSLICHGDIKPANILLDSNLTSKLSDFGVSRLLSGGVTQYTVHIKGSVSYMDPIYFHEGCLTPRSDVYSFGMVLLELIARKRVRKGNINLIGGGEIFDAEIANRSNMKILKEMRKLAIECLTLDIHKRPQMNVVAKRLRTLKKELKDMHGRYSEHILASHRSWRKNDNQGPSYNSRMQLKKSLSIFKRNLSNSSKILLGLGNMRIFTQEELNEITQNYSCLLSGGTSGKVYKGTLEDNTVVAVRIFSEVLEGFEEAFINGGMILSQIVHKNIIRLLGYCLNADCPAFVYEYAARGTLSDILDGREDFPLHLRVKIAVETAEALEYLHSSAAGMIRHGYVAPSKTLVDDSFTPKLTGFSWAQRLNNDDSAIHDHDKYCVSLKLKTDVYQFGVLVLTLISRKNFVFYADHEHLVSQFLAAYKADNSGRAFFDDDITTRSEDVALLEEIGKLLLKCICLEIDQRPTMKKVAQHLRIIRRCWKNNCTSDGASLVTN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.056768 | 1.899277 | 0.140981 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0112700 | RBH | 1.406917 | 0.980165 | 0.876126 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g02360 | RBH | 0.931053 | 0.631778 | 0.135530 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0112700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0000630 | RBH | 0.293820 | 44.022243 | 0.280250 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0000160 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0000620 | RBH | 0.837453 | 26.016306 | 1.170302 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0000560 | RBH | 0.031513 | 0.201016 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0000550 | RBH | 0.0 | 14.389874 | 3.182516 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0018100 | RBH | 0.4669615 | 3.219749 | 0.0290525 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0000590 | RBH | 0.064446 | 0.991592 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0019500 | RBH | 0.9207445 | 1.182914 | 0.0044335 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0000590 | RBH | 0.0 | 0.267580 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0000630 | RBH | 0.080601 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0000590 | RBH | 0.0 | 11.160851 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0000570 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0000560 | RBH | 0.052034 | 3.049610 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G000570 | RBH | 0.071624 | 1.343734 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0000530 | RBH | 0.0 | 13.957201 | 0.0 |
