Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_09g0014340 | OGI:09054040 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr09:18961050-18965471 | ||||||||
| Gene Symbol | HSP82B, OsHSP82, hsp82B, HSP82 | ||||||||||
| DNA seq | ttccatcaatttgcagcaaccaggcatactaagcttaccatccactatctagccatacaataacagatggaagaagttccagcatactgcgggcaaacaatggtccatcattccatcaatttgcagcaaccaggcttattaggaagaagttccagaatactggtcgggctgctcacaacagctacttggaatactcaagttcaagatggaaattggcacactccaagggattcagccaacataatttgataaaaaaagacgttataagtatgaataagaagctggcatatacttcggctagtagcattgcaacgcaaacagtatgacaaggtaccacgcattgtttaagagctaagacaaagacaaaactgatgcatccaacgtaccaaaaagaaagcgaacagcagcagtcagatagctatgagaagagaactaggagagggataactagaagggacagaatggcatccatgggtccatgacgtttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcggcatgtcggcgtcagcctcggcggactcgtcctcgtcgatgctcaggccgagcttgagcatgcggtggatcctggtgccgaaggtgttggggtcctccaagctgaaaccggaggtcagcagggcagtctcgaagagcagcatcaccaggtccttcacggacttgtcattcttgtccgcatcggcacgcttgcggagctcgtccatgatggcattctccgggttgatctccatggtcttcttgctagacatgtagccggccatgctggagtccctcagagcctgggccttcatgatcctctccatgttagcagtccagccatactccccagtgactagacagcagggagagtccaccacacggtcagagacaacaaccttctccaccttgtcaccgagcacctccttgatcaccttgcacagaccctcgaacttctccttgagttcctcctgccgcttcttctcgtcctcactctcatcaagcttcagaccttccttggtggcagagacgagcttcttgccttcaaactccttaagctgaccaacagcgtactcatcaatggcatcaaccatgtacaggacctcataacccttcttcttcagcttctcgaggaagggggagttctcaacagccttcttgctctcaccagtgatgtaatagatctcactctggccctccttcatccgggttacgtagtccttgaggctggtcaactcatcaccactcttggtggagtgatacctcaggagctcagcaatcttggtcctgttggtggaatcctcatggatgccaagcttgagattcttggagaaagcctcgtagaacttgttgtagtcttccttgttctcagcgatctcaaagaagagctccacgcacttcttcacaaggttcttgcggatcaccttcaggatcttgttctgctggagcatctcacgtgagatgttgaggggaaggtcttcagaatcaacaatgcccttgacaaagctgagccactctgggatcaactcctcacagttgtccatgataaacacccggcgtacgtacagcttgatgttgttttgcttcttcctggtgtcaaagaggtcaaatggcgctctctttggtacaaacaggatggccttgaattcaagctgaccctccacagagaagtgcttgacagccagatgttcctcccagtcgtttgtcaagctcttgtagaaagcagcgtactcttccttggtgatctcctctggcttcctcaaccaaatgggtttctgcttgttcatcacgttccactcgtgagagacttccttgatcttcttctttttcttctctttctcttccttctcctcatcaacatcctcaacctttccctcctcagcatccttcttctcttcctcgtcttcatcatcagaaatctccttctcagttgtcttctcagtccatagggagatagggtagctgatgaactcagaatgcttcttcaccagatccttgaggcgacgctcctcaaggtattccagctgcaagcaaaaattgcagttgtttattaaacaacaaacagcaagagaacacaagagacaagaaacaaaacaaacaatacaagtatttatttcaacaaggtgttatgctgctatgcattctgataagaacattgggacaaacgatatactccctccgtttcgaaatgtttgacgccgttgactttttagcacatgtttgaccgttcgtcttattcaaaaaaattaagtaattattaattcttttcctatcatttgattcattgttaaatatatttttgtgtaggcatataattttacatatctcacaaaagtttttgaataagacgaacggtcaaacatgtgctaaaaaagtcaacggtgtcaaacatttcaaaacgaagggagtatataaattgattagcagaatacaacaacaaagacagaccataactatgtaacaatgttagcatacaaggaagtcataactacagcacaaaagaacagagacaagctgaaaagcagtaaatctcaaaattcatttcatgttaatggaaaacagtaagatgtatacaactaaatctcaaaattcatttcatattaatggaaaacagtaagatgtatacaacagcaaatatgcattgttacaactaatactattgcttcattaagtgattactaccgaggaaacccagatcactagttcagaattacagtttagcggcattgttaatttttagtcaatataaccaagagagcaagataccactattccaaaaactgctgtacaCccctaatctatacagttcatttattgtagcatacaaggaagtcacaactacagcacaaaagaacagaaagacaagctgaaagcagtaaatctcaaaattcatttcatgttaacggaaaacagtaagatgtatactacaccaaatatatattgttacaactaatactattgtttaattaagtgattactaccaaagaaacccatatcactagttcagaattacggtttatcagcaatgttgattttcagtaaatgtaaccaagagaacaagataccactattccaaaaactgctgtacacccctaatctatacagttcatttattgtactacaaaatgagcaccatgtcatcaagacaacctcttattaaagtagcaagaatatttcttcagaacatgctaacagtcaagaaagatcatgtacactggtagcatgccaactcaaccatacaggcccgaactcatccaattgtcatatgtacagaacatctaaagttctgacaaaaaaaacatcacatggacagcaacatatatcacacaagtaataggaattcacaagagaaatgtgctgaatcttatacctgatcatccttgaggtagagggtgatcttagtaccccgtccaagctgctcaccagaggtatcacgtgtaacagtgaaggacccaccggcctgtgactcccacacatactgctcgtcgtcgttgtgcttggtggtcacaacaaccctctcagcaacaaggtaggcggagtagaacccgacaccaaactgcccaatcatggacacatcagcaccagcagcgagcgcctccatgaactccttggtccctgacctggcgatggtaccgaggttgttgacgaggtccgacttggtcatgccgacaccactgtcgatgatcgacagggtgttgctagccttgtcggggacaatgtggatgaacagctccggctgcgcatcgagcttgctcttgtccgtgaggctctcgaacctaatcttatccaatgcctgcagaaaccacacacacccatgtcacatcgaattcatcacccaaacacacagatctgtaaaagcatcagcacactaccacactatacagattacacgcacgggtaaacacacaaccctcgctgatttgtaacaagtttatgctagtgctcagatgtggccatattcacatttcgatgagtaaaacaaacaaataaactagcacaaactctacaaatcacgagtcaacgctcacacctcattgatttgaaacaggtctacgccctatcagtatatgatcctcagatgccgtcacgctcacagatcgacgcgtacaacaacagcaaagagcacataagcaagcaccgatttcgattcctcgacgagaggggattaatttcgggggcggcgcaaacttacatcggaggagttggagatgagctcgcggaggaagatctccttgttggagtagaaggtgttgatgatgagggacagcagctggttgatctcggcctggaaggcgaacgtctcggtctccgacgccatggcttcctcctcctgtgctcctgagatctcgggggcgtggagaggacgagaagaaacgagaggcggctagggtttggaggggtttccaagag
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| CDS seq | atgaccaagtcggacctcgtcaacaacctcggtaccatcgccaggtcagggaccaaggagttcatggaggcgctcgctgctggtgctgatgtgtccatgattgggcagtttggtgtcgggttctactccgcctaccttgttgctgagagggttgttgtgaccaccaagcacaacgacgacgagcagtatgtgtgggagtcacaggccggtgggtccttcactgttacacgtgatacctctggtgagcagcttggacggggtactaagatcaccctctacctcaaggatgatcagctggaataccttgaggagcgtcgcctcaaggatctggtgaagaagcattctgagttcatcagctaccctatctccctatggactgagaagacaactgagaaggagatttctgatgatgaagacgaggaagagaagaaggatgctgaggagggaaaggttgaggatgttgatgaggagaaggaagagaaagagaagaaaaagaagaagatcaaggaagtctctcacgagtggaacgtgatgaacaagcagaaacccatttggttgaggaagccagaggagatcaccaaggaagagtacgctgctttctacaagagcttgacaaacgactgggaggaacatctggctgtcaagcacttctctgtggagggtcagcttgaattcaaggccatcctgtttgtaccaaagagagcgccatttgacctctttgacaccaggaagaagcaaaacaacatcaagctgtacgtacgccgggtgtttatcatggacaactgtgaggagttgatcccagagtggctcagctttgtcaagggcattgttgattctgaagaccttcccctcaacatctcacgtgagatgctccagcagaacaagatcctgaaggtgatccgcaagaaccttgtgaagaagtgcgtggagctcttctttgagatcgctgagaacaaggaagactacaacaagttctacgaggctttctccaagaatctcaagcttggcatccatgaggattccaccaacaggaccaagattgctgagctcctgaggtatcactccaccaagagtggtgatgagttgaccagcctcaaggactacgtaacccggatgaaggagggccagagtgagatctattacatcactggtgagagcaagaaggctgttgagaactcccccttcctcgagaagctgaagaagaagggttatgaggtcctgtacatggttgatgccattgatgagtacgctgttggtcagcttaaggagtttgaaggcaagaagctcgtctctgccaccaaggaaggtctgaagcttgatgagagtgaggacgagaagaagcggcaggaggaactcaaggagaagttcgagggtctgtgcaaggtgatcaaggaggtgctcggtgacaaggtggagaaggttgttgtctctgaccgtgtggtggactctccctgctgtctagtcactggggagtatggctggactgctaacatggagaggatcatgaaggcccaggctctgagggactccagcatggccggctacatgtctagcaagaagaccatggagatcaacccggagaatgccatcatggacgagctccgcaagcgtgccgatgcggacaagaatgacaagtccgtgaaggacctggtgatgctgctcttcgagactgccctgctgacctccggtttcagcttggaggaccccaacaccttcggcaccaggatccaccgcatgctcaagctcggcctgagcatcgacgaggacgagtccgccgaggctgacgccgacatgccgccgctggaggacgacgccggcgagagcaagatggaggaggtcgactaa
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| Protein seq | MTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKDAEEGKVEDVDEEKEEKEKKKKKIKEVSHEWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQSEIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAEADADMPPLEDDAGESKMEEVD |
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| Function | Heat shock protein 81-3 [UniProtKB/Swiss-Prot:Q07078] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_09g0014340 | OsKeNa_09g0014340.01 | Chr09 | 18961050 | 18964854 | - | NAM | ||
| CDS seq | atgaccaagtcggacctcgtcaacaacctcggtaccatcgccaggtcagggaccaaggagttcatggaggcgctcgctgctggtgctgatgtgtccatgattgggcagtttggtgtcgggttctactccgcctaccttgttgctgagagggttgttgtgaccaccaagcacaacgacgacgagcagtatgtgtgggagtcacaggccggtgggtccttcactgttacacgtgatacctctggtgagcagcttggacggggtactaagatcaccctctacctcaaggatgatcagctggaataccttgaggagcgtcgcctcaaggatctggtgaagaagcattctgagttcatcagctaccctatctccctatggactgagaagacaactgagaaggagatttctgatgatgaagacgaggaagagaagaaggatgctgaggagggaaaggttgaggatgttgatgaggagaaggaagagaaagagaagaaaaagaagaagatcaaggaagtctctcacgagtggaacgtgatgaacaagcagaaacccatttggttgaggaagccagaggagatcaccaaggaagagtacgctgctttctacaagagcttgacaaacgactgggaggaacatctggctgtcaagcacttctctgtggagggtcagcttgaattcaaggccatcctgtttgtaccaaagagagcgccatttgacctctttgacaccaggaagaagcaaaacaacatcaagctgtacgtacgccgggtgtttatcatggacaactgtgaggagttgatcccagagtggctcagctttgtcaagggcattgttgattctgaagaccttcccctcaacatctcacgtgagatgctccagcagaacaagatcctgaaggtgatccgcaagaaccttgtgaagaagtgcgtggagctcttctttgagatcgctgagaacaaggaagactacaacaagttctacgaggctttctccaagaatctcaagcttggcatccatgaggattccaccaacaggaccaagattgctgagctcctgaggtatcactccaccaagagtggtgatgagttgaccagcctcaaggactacgtaacccggatgaaggagggccagagtgagatctattacatcactggtgagagcaagaaggctgttgagaactcccccttcctcgagaagctgaagaagaagggttatgaggtcctgtacatggttgatgccattgatgagtacgctgttggtcagcttaaggagtttgaaggcaagaagctcgtctctgccaccaaggaaggtctgaagcttgatgagagtgaggacgagaagaagcggcaggaggaactcaaggagaagttcgagggtctgtgcaaggtgatcaaggaggtgctcggtgacaaggtggagaaggttgttgtctctgaccgtgtggtggactctccctgctgtctagtcactggggagtatggctggactgctaacatggagaggatcatgaaggcccaggctctgagggactccagcatggccggctacatgtctagcaagaagaccatggagatcaacccggagaatgccatcatggacgagctccgcaagcgtgccgatgcggacaagaatgacaagtccgtgaaggacctggtgatgctgctcttcgagactgccctgctgacctccggtttcagcttggaggaccccaacaccttcggcaccaggatccaccgcatgctcaagctcggcctgagcatcgacgaggacgagtccgccgaggctgacgccgacatgccgccgctggaggacgacgccggcgagagcaagatggaggaggtcgactaa
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| Protein seq | MTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKDAEEGKVEDVDEEKEEKEKKKKKIKEVSHEWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQSEIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAEADADMPPLEDDAGESKMEEVD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_09g0014340 | OsKeNa_09g0014340.02 | Chr09 | 18961050 | 18964854 | - | NAM | ||
| CDS seq | atgaccaagtcggacctcgtcaacaacctcggtaccatcgccaggtcagggaccaaggagttcatggaggcgctcgctgctggtgctgatgtgtccatgattgggcagtttggtgtcgggttctactccgcctaccttgttgctgagagggttgttgtgaccaccaagcacaacgacgacgagcagtatgtgtgggagtcacaggccggtgggtccttcactgttacacgtgatacctctggtgagcagcttggacggggtactaagatcaccctctacctcaaggatgatcagctggaataccttgaggagcgtcgcctcaaggatctggtgaagaagcattctgagttcatcagctaccctatctccctatggactgagaagacaactgagaaggagatttctgatgatgaagacgaggaagagaagaaggatgctgaggagggaaaggttgaggatgttgatgaggagaaggaagagaaagagaagaaaaagaagaagatcaaggaagtctctcacgagtggaacgtgatgaacaagcagaaacccatttggttgaggaagccagaggagatcaccaaggaagagtacgctgctttctacaagagcttgacaaacgactgggaggaacatctggctgtcaagcacttctctgtggagggtcagcttgaattcaaggccatcctgtttgtaccaaagagagcgccatttgacctctttgacaccaggaagaagcaaaacaacatcaagctgtacgtacgccgggtgtttatcatggacaactgtgaggagttgatcccagagtggctcagctttgtcaagggcattgttgattctgaagaccttcccctcaacatctcacgtgagatgctccagcagaacaagatcctgaaggtgatccgcaagaaccttgtgaagaagtgcgtggagctcttctttgagatcgctgagaacaaggaagactacaacaagttctacgaggctttctccaagaatctcaagcttggcatccatgaggattccaccaacaggaccaagattgctgagctcctgaggtatcactccaccaagagtggtgatgagttgaccagcctcaaggactacgtaacccggatgaaggagggccagagtgagatctattacatcactggtgagagcaagaaggctgttgagaactcccccttcctcgagaagctgaagaagaagggttatgaggtcctgtacatggttgatgccattgatgagtacgctgttggtcagcttaaggagtttgaaggcaagaagctcgtctctgccaccaaggaaggtctgaagcttgatgagagtgaggacgagaagaagcggcaggaggaactcaaggagaagttcgagggtctgtgcaaggtgatcaaggaggtgctcggtgacaagtccgtgaaggacctggtgatgctgctcttcgagactgccctgctgacctccggtttcagcttggaggaccccaacaccttcggcaccaggatccaccgcatgctcaagctcggcctgagcatcgacgaggacgagtccgccgaggctgacgccgacatgccgccgctggaggacgacgccggcgagagcaagatggaggaggtcgactaa
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| Protein seq | MTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKDAEEGKVEDVDEEKEEKEKKKKKIKEVSHEWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQSEIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAEADADMPPLEDDAGESKMEEVD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_09g0014340 | OsKeNa_09g0014340.03 | Chr09 | 18962905 | 18965471 | - | IsoSeq | ||
| CDS seq | ctcttggaaacccctccaaaccctagccgcctctcgtttcttctcgtcctctccacgcccccgagatctcaggagcacaggaggaggaagccatggcgtcggagaccgagacgttcgccttccaggccgagatcaaccagctgctgtccctcatcatcaacaccttctactccaacaaggagatcttcctccgcgagctcatctccaactcctccgatgcattggataagattaggttcgagagcctcacggacaagagcaagctcgatgcgcagccggagctgttcatccacattgtccccgacaaggctagcaacaccctgtcgatcatcgacagtggtgtcg
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| Protein seq | LLETPPNPSRLSFLLVLSTPPRSQEHRRRKPWRRRPRRSPSRPRSTSCCPSSSTPSTPTRRSSSASSSPTPPMHWIRLGSRASRTRASSMRSRSCSSTLSPTRLATPCRSSTVVS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr09 | 18961050 | 18963085 | - | OsKeNa_09g0014340.01 | OsKeNa_09g0014340.01,OsKeNa_09g0014340.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.066383 | 60.948502 | 41.090832 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0482100 | RBH | 31.111168 | 27.719387 | 97.427010 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g30412 | RBH | 18.009653 | 16.293974 | 22.715530 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0482400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0014390 | RBH | 9.946911 | 100.862274 | 76.302635 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0020960 | RBH | 3.323928 | 291.774902 | 34.179180 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0014600 | RBH | 16.415916 | 88.436905 | 75.374802 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0014420 | RBH | 1.668800 | 5.583127 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0014510 | RBH | 69.789131 | 441.999023 | 171.876785 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0309600 | RBH | 71.088852 | 228.8950655 | 464.0273135 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0014400 | RBH | 2.670506 | 14.365153 | 14.051429 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0300100 | RBH | 58.904004 | 107.8112225 | 145.555891 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0014380 | RBH | 2.242486 | 4.071674 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0014230 | RBH | 2.758377 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0014270 | RBH | 45.765369 | 373.306732 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0014170 | RBH | 3.933704 | 0.0 | 8.740092 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0014230 | RBH | 1.503621 | 66.853683 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G014720 | RBH | 4.146991 | 93.750000 | 38.042618 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0014480 | RBH | 16.016918 | 236.043640 | 111.972511 |
