Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_09g0014330 | OGI:09054040 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr09:18959247-18960464 | ||||||||
| Gene Symbol | OsHsp90, HSP90 | ||||||||||
| DNA seq | tccgcgcggcgttcgcgcgctccatggcgcagtacaagaaggcgcccgcgctgtccatcctcgacacgtgctacgacttcaccggccaccggacggcgcagatacccacggtggagctggcgttcgccggcggcgccaccgtcagcctcgacttcaccggcgtgctctacgtctccaaggtgtcgcaggcgtgcctggcgttcgcgcccaacgccgacgactcgtccatcgccatcctcgggaacacgcagcagaagacgttcgccgtcgcgtacgacgttgccaaccagaggatcggcttcggcgccaagggatgcagctgattacaatccgagatgatgaatcaatcgatcattttgttttgttacagtgacatatatatggggaaaaaatagtgaaaaaaaactgcaataaataagcatcatcgatagtgacatggaagaagttgaaaaccgttaaaaatatttttgatgcaaaccagttcgggctagtaacagtattacagtgtgcctgatagtagcacatttcaggctttatttaattatttttttatcactctctggacactgaacagtgaacactatactaccacaagaggcagcagctcacacagtgaaaaccgaaaagatgttacggtggtttatggtacgagtgtaagtggcgtgaaatccacttgtaggctaaaataaaccgcaaatccacttataaattaaaataagtgggttcgcggctcaccgaccaacacccatagtctacccacttacaccgtctatggcacgccatggcgattgatggcgtcggtggcggtgtcaacgcggccggtgccggcggcggcagcggcggtgtcgccttgttggtggcggcgctgtgtggcgacggggacggcggtgccggggatggtgggggcgtcggtgccgcagccgccgtgggggacgtcggagacggggaggtggccgcgggcgccgtaggcgcgcagcttgtagtcctccaggccgtcgtccttcttgtactgcacgtacgggctggtgtccatcggcagctgcaccgtgtcgccggcgtccggcttcctctgctgctgctgctgctgggtctccttggttgcctccattgcaagtcctccgcttgatctgcagcaagagtgcagccttgtttctctgaatgtgtacttgacctggtagtatccaacactgtttataatggatgttgcttttggcctac
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| CDS seq | atggaggcaaccaaggagacccagcagcagcagcagcagaggaagccggacgccggcgacacggtgcagctgccgatggacaccagcccgtacgtgcagtacaagaaggacgacggcctggaggactacaagctgcgcgcctacggcgcccgcggccacctccccgtctccgacgtcccccacggcggctgcggcaccgacgcccccaccatccccggcaccgccgtccccgtcgccacacagcgccgccaccaacaaggcgacaccgccgctgccgccgccggcaccggccgcgttgacaccgccaccgacgccatcaatcgccatggcgtgcca |
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| Protein seq | MEATKETQQQQQQRKPDAGDTVQLPMDTSPYVQYKKDDGLEDYKLRAYGARGHLPVSDVPHGGCGTDAPTIPGTAVPVATQRRHQQGDTAAAAAGTGRVDTATDAINRHGVP |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_09g0014330 | OsKeNa_09g0014330.01 | Chr09 | 18959247 | 18960464 | - | NAM | ||
| CDS seq | atggaggcaaccaaggagacccagcagcagcagcagcagaggaagccggacgccggcgacacggtgcagctgccgatggacaccagcccgtacgtgcagtacaagaaggacgacggcctggaggactacaagctgcgcgcctacggcgcccgcggccacctccccgtctccgacgtcccccacggcggctgcggcaccgacgcccccaccatccccggcaccgccgtccccgtcgccacacagcgccgccaccaacaaggcgacaccgccgctgccgccgccggcaccggccgcgttgacaccgccaccgacgccatcaatcgccatggcgtgcca
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| Protein seq | MEATKETQQQQQQRKPDAGDTVQLPMDTSPYVQYKKDDGLEDYKLRAYGARGHLPVSDVPHGGCGTDAPTIPGTAVPVATQRRHQQGDTAAAAAGTGRVDTATDAINRHGVP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0482300 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g30418 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0482550 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0014380 | RBH | 0.000000 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0014590 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0014410 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0014500 | RBH | 0.000000 | 0.000000 | 0.382993 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0309500 | RBH | 0 | 0 | 0.252717 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0014390 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0299900 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0014370 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0014220 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0014260 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0014160 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0014220 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G014710 | RBH | 0.000000 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0014470 | RBH | 0.000000 | 0.000000 | 0.000000 |
