Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_09g0012670 | OGI:09050090 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr09:17529944-17533180 | ||||||||
| Gene Symbol | SDRLK-65 | ||||||||||
| DNA seq | ctgttttcttttcctggttttaagtacagtttacagccttctctacttcaccaaacaaatgtaccgggcagatcatatatacttccttcgttttacaatataagtcattttagcattttccatatgaacattgtgaaacggagagagtactaattaatcagcaatcattttatcatctgtccatgtcaccagcttcaaagctaactttgtctaatgctctagtacatggacaagttggcatagttcttttaatctatggcagccattcttttgtgtttttcaacctgtccacacctcatggatcagttttctcttcttctttatcagatgaagaactgcagatactgccaagcatataaccacgggaggaaccgacgaaagtatgcagcattgcagattatcgtccaggGAgtattacgtcaggttaatcggttccatggattctataatggacaggtgtactgccacgtcggcactgcggacaattgtacagtgccacgtcatatgtgccggatgatatgcagctcggtcttcatagtgctatcttggtgctgacgtgtcctttagtgactcgtccaaatgcgagccaccaccggccatggcggtcaacgaacccggcaccggcaagggatagctcctgccgtagagccggaggaagccgagcgcctcgacccgcggctccggcggcggcacgctgccttccaggatccgcaccacggtggccatgctcggccgcagcgcGgggtcctcgtgaaggcagcagagcgcgacgcggacggtgcgtgccgcttcggcctcgtcgacgcgcccctccagcctcgcgtcgacgaggtccaggtatctccgctgctcatggagctccagtgccaccatcgggaagtactcgtcgccgccgccgctcgtgccactcgccgtcgacgtcatcgcgctgctccatccggacggcaagtccgagtgctcgccgctgccggcagcgacggcgacgttgttggccggcgccgccgcctcctgctcgccgcggttcttcctcccgtgtatcagctcgagcagcaccatgccgaagctgtagacgtcggcgcggtcggagatggccgcgttgctgatccactcgggcgcgaggtacccgcgcgtgccgcgcatggtggtgaacagcgccgactgctcccgcgacatcagcttggcgaggccgaagtccgagatcttcacctggccgccgttggcgagcaggatgttctccggcttgacgtcgcagtgcacgatcttctgctcgcacccggtgtgcaggtacgccagcccgcgcgccgcgccgatcgccacctccatgcgctccccccactccagcaccggccccgtgcggccgaacagtgaccggtcgagcgagccccggttcatgtactcgtagacgagcagccggcgggaaccctcggcgcagaagccgcggaggcggacgaggttgatgtggcggatgttgccgatgatggtgatctccgtgcagaactcccgcttggcctgcacgccggcggcctcgagctttttcacggcgatgagcccctcgccgcctggaagctcccctttgtacacggtgccgaacccgccggatcccaccttcgtcgcgaaattggaggtcatcgttgtaatctcctggtagctaaacctcgccggcatgcccggtatgacgatgtcgtcatcgtcgccgccgccgtcgtcgtcagcgtccgcgttatagccggtgtccatggacggcgacttctgacggcccaagtacactttcatggtggagctcttgcccttctttttcttgccgttcttgctcatcttgttcctccaccatatataccatccgagcacggcgaggagaaggaacgccgcgacggacggcaggacgatcggcacggtgtggttcgccgacgacgagccgatttggttgctcccggccttggttgcggagttgaacgtcttgatgtatcccaggtttgtatctgatgcgcccttgtacagcgagccgagctgctttcctccgatcaagcggcagctcagggagacgctgtcgtggaagaagccgaggcaagcgcagctggcggtgcagagcgcgcgacacgccgtcttgttgacgccggtgttcgtcggggcgtcgaacttcgtggcgaagtaggaggtcagcggcttgagggcgatgtatgaaacggaggcgccgccgctgctactgtcgttgttctgacacgcggccggcgacgcgagcgtcgagccgtcccccggcgtgcacgagccggcaactgtcacggatgcggcgaagagcggcgggcacgtgcaggttgagccgttgcccgccggtgaacagtaaccgagggacgggcactgcagcgggaggtcgcagtcgccggctggggcgatgaagtcgccgccgaccggcgccgaggagttcacgagcgcgtagctgatgatgcgcagccggccgtcgctccccagcttcagcatgcggaactccgccggcgcgaggcccacccggaacaccatagcgccgtcggcggcgaccgcgaacagccccgacgcgttcaccgacatggacgccacggcggcgttggtatccttgaacccccgggcgtcgttcgacagccgccagtaggtggacccctgccacgtcaactgcacgtcggcggtgatcacgccgaaccggtagtccccctgggagaaatcggtagcgcccttcgccgacgacaggtatgctccggcgagcagctgctgcccgggcagcagcgtgtcggtggcgttatcgaacgaccgccacagcgtggcgttcccggcgtccagcagctgcaggtccccggtgtcctgcaggcggagcgccgcgacgggggaccgcagcggcggcgttgaccacagcaccgtcccattggcgtccgacacggtgatccctcccacagagagctggaccttaccggtcgagctcgtcggcgcgtcgcggttggccgaccagacgggcgtccccgacggcgcgtgcagcacggcgaggtagaagctggcctgctgcttcccggggttgaacaccgccgccctgaacgagccgttcctggacaccaagaacgcgccgccggtgtcgacgtagtcgtagctagtcgccgtgaagctgggccgcacgatctccacggccaggggccccgcgtccgcgtcccgcacggactcgagcagcagcagcagcggcggcagcagaaggcacgcgagcgatctcgagggaggcat
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| CDS seq | atgcctccctcgagatcgctcgcgtgccttctgctgccgccgctgctgctgctgctcgagtccgtgcgggacgcggacgcggggcccctggccgtggagatcgtgcggcccagcttcacggcgactagctacgactacgtcgacaccggcggcgcgttcttggtgtccaggaacggctcgttcagggcggcggtgttcaaccccgggaagcagcaggccagcttctacctcgccgtgctgcacgcgccgtcggggacgcccgtctggtcggccaaccgcgacgcgccgacgagctcgaccggtaaggtccagctctctgtgggagggatcaccgtgtcggacgccaatgggacggtgctgtggtcaacgccgccgctgcggtcccccgtcgcggcgctccgcctgcaggacaccggggacctgcagctgctggacgccgggaacgccacgctgtggcggtcgttcgataacgccaccgacacgctgctgcccgggcagcagctgctcgccggagcatacctgtcgtcggcgaagggcgctaccgatttctcccagggggactaccggttcggcgtgatcaccgccgacgtgcagttgacgtggcaggggtccacctactggcggctgtcgaacgacgcccgggggttcaaggataccaacgccgccgtggcgtccatgtcggtgaacgcgtcggggctgttcgcggtcgccgccgacggcgctatggtgttccgggtgggcctcgcgccggcggagttccgcatgctgaagctggggagcgacggccggctgcgcatcatcagctacgcgctcgtgaactcctcggcgccggtcggcggcgacttcatcgccccagccggcgactgcgacctcccgctgcagtgcccgtccctcggttactgttcaccggcgggcaacggctcaacctgcacgtgcccgccgctcttcgccgcatccgtgacagttgccggctcgtgcacgccgggggacggctcgacgctcgcgtcgccggccgcgtgtcagaacaacgacagtagcagcggcggcgcctccgtttcatacatcgccctcaagccgctgacctcctacttcgccacgaagttcgacgccccgacgaacaccggcgtcaacaagacggcgtgtcgcgcgctctgcaccgccagctgcgcttgcctcggcttcttccacgacagcgtctccctgagctgccgcttgatcggaggaaagcagctcggctcgctgtacaagggcgcatcagatacaaacctgggatacatcaagacgttcaactccgcaaccaaggccgggagcaaccaaatcggctcgtcgtcggcgaaccacaccgtgccgatcgtcctgccgtccgtcgcggcgttccttctcctcgccgtgctcggatggtatatatggtggaggaacaagatgagcaagaacggcaagaaaaagaagggcaagagctccaccatgaaagtgtacttgggccgtcagaagtcgccgtccatggacaccggctataacgcggacgctgacgacgacggcggcggcgacgatgacgacatcgtcataccgggcatgccggcgaggtttagctaccaggagattacaacgatgacctccaatttcgcgacgaaggtgggatccggcgggttcggcaccgtgtacaaaggggagcttccaggcggcgaggggctcatcgccgtgaaaaagctcgaggccgccggcgtgcaggccaagcgggagttctgcacggagatcaccatcatcggcaacatccgccacatcaacctcgtccgcctccgcggcttctgcgccgagggttcccgccggctgctcgtctacgagtacatgaaccggggctcgctcgaccggtcactgttcggccgcacggggccggtgctggagtggggggagcgcatggaggtggcgatcggcgcggcgcgcgggctggcgtacctgcacaccgggtgcgagcagaagatcgtgcactgcgacgtcaagccggagaacatcctgctcgccaacggcggccaggtgaagatctcggacttcggcctcgccaagctgatgtcgcgggagcagtcggcgctgttcaccaccatgcgcggcacgcgcgggtacctcgcgcccgagtggatcagcaacgcggccatctccgaccgcgccgacgtctacagcttcggcatggtgctgctcgagctgatacacgggaggaagaaccgcggcgagcaggaggcggcggcgccggccaacaacgtcgccgtcgctgccggcagcggcgagcactcggacttgccgtccggatggagcagcgcgatgacgtcgacggcgagtggcacgagcggcggcggcgacgagtacttcccgatggtggcactggagctccatgagcagcggagatacctggacctcgtcgacgcgaggctggaggggcgcgtcgacgaggccgaagcggcacgcaccgtccgcgtcgcgctctgctgccttcacgaggacccCgcgctgcggccgagcatggccaccgtggtgcggatcctggaaggcagcgtgccgccgccggagccgcgggtcgaggcgctcggcttcctccggctctacggcaggagctatcccttgccggtgccgggttcgttgaccgccatggccggtggtggctcgcatttggacgagtcactaaaggacacgtcagcaccaagatag
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| Protein seq | MPPSRSLACLLLPPLLLLLESVRDADAGPLAVEIVRPSFTATSYDYVDTGGAFLVSRNGSFRAAVFNPGKQQASFYLAVLHAPSGTPVWSANRDAPTSSTGKVQLSVGGITVSDANGTVLWSTPPLRSPVAALRLQDTGDLQLLDAGNATLWRSFDNATDTLLPGQQLLAGAYLSSAKGATDFSQGDYRFGVITADVQLTWQGSTYWRLSNDARGFKDTNAAVASMSVNASGLFAVAADGAMVFRVGLAPAEFRMLKLGSDGRLRIISYALVNSSAPVGGDFIAPAGDCDLPLQCPSLGYCSPAGNGSTCTCPPLFAASVTVAGSCTPGDGSTLASPAACQNNDSSSGGASVSYIALKPLTSYFATKFDAPTNTGVNKTACRALCTASCACLGFFHDSVSLSCRLIGGKQLGSLYKGASDTNLGYIKTFNSATKAGSNQIGSSSANHTVPIVLPSVAAFLLLAVLGWYIWWRNKMSKNGKKKKGKSSTMKVYLGRQKSPSMDTGYNADADDDGGGDDDDIVIPGMPARFSYQEITTMTSNFATKVGSGGFGTVYKGELPGGEGLIAVKKLEAAGVQAKREFCTEITIIGNIRHINLVRLRGFCAEGSRRLLVYEYMNRGSLDRSLFGRTGPVLEWGERMEVAIGAARGLAYLHTGCEQKIVHCDVKPENILLANGGQVKISDFGLAKLMSREQSALFTTMRGTRGYLAPEWISNAAISDRADVYSFGMVLLELIHGRKNRGEQEAAAPANNVAVAAGSGEHSDLPSGWSSAMTSTASGTSGGGDEYFPMVALELHEQRRYLDLVDARLEGRVDEAEAARTVRVALCCLHEDPALRPSMATVVRILEGSVPPPEPRVEALGFLRLYGRSYPLPVPGSLTAMAGGGSHLDESLKDTSAPR |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [UniProtKB/Swiss-Prot:O65238] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_09g0012670 | OsKeNa_09g0012670.01 | Chr09 | 17529944 | 17533180 | - | NAM | ||
| CDS seq | atgcctccctcgagatcgctcgcgtgccttctgctgccgccgctgctgctgctgctcgagtccgtgcgggacgcggacgcggggcccctggccgtggagatcgtgcggcccagcttcacggcgactagctacgactacgtcgacaccggcggcgcgttcttggtgtccaggaacggctcgttcagggcggcggtgttcaaccccgggaagcagcaggccagcttctacctcgccgtgctgcacgcgccgtcggggacgcccgtctggtcggccaaccgcgacgcgccgacgagctcgaccggtaaggtccagctctctgtgggagggatcaccgtgtcggacgccaatgggacggtgctgtggtcaacgccgccgctgcggtcccccgtcgcggcgctccgcctgcaggacaccggggacctgcagctgctggacgccgggaacgccacgctgtggcggtcgttcgataacgccaccgacacgctgctgcccgggcagcagctgctcgccggagcatacctgtcgtcggcgaagggcgctaccgatttctcccagggggactaccggttcggcgtgatcaccgccgacgtgcagttgacgtggcaggggtccacctactggcggctgtcgaacgacgcccgggggttcaaggataccaacgccgccgtggcgtccatgtcggtgaacgcgtcggggctgttcgcggtcgccgccgacggcgctatggtgttccgggtgggcctcgcgccggcggagttccgcatgctgaagctggggagcgacggccggctgcgcatcatcagctacgcgctcgtgaactcctcggcgccggtcggcggcgacttcatcgccccagccggcgactgcgacctcccgctgcagtgcccgtccctcggttactgttcaccggcgggcaacggctcaacctgcacgtgcccgccgctcttcgccgcatccgtgacagttgccggctcgtgcacgccgggggacggctcgacgctcgcgtcgccggccgcgtgtcagaacaacgacagtagcagcggcggcgcctccgtttcatacatcgccctcaagccgctgacctcctacttcgccacgaagttcgacgccccgacgaacaccggcgtcaacaagacggcgtgtcgcgcgctctgcaccgccagctgcgcttgcctcggcttcttccacgacagcgtctccctgagctgccgcttgatcggaggaaagcagctcggctcgctgtacaagggcgcatcagatacaaacctgggatacatcaagacgttcaactccgcaaccaaggccgggagcaaccaaatcggctcgtcgtcggcgaaccacaccgtgccgatcgtcctgccgtccgtcgcggcgttccttctcctcgccgtgctcggatggtatatatggtggaggaacaagatgagcaagaacggcaagaaaaagaagggcaagagctccaccatgaaagtgtacttgggccgtcagaagtcgccgtccatggacaccggctataacgcggacgctgacgacgacggcggcggcgacgatgacgacatcgtcataccgggcatgccggcgaggtttagctaccaggagattacaacgatgacctccaatttcgcgacgaaggtgggatccggcgggttcggcaccgtgtacaaaggggagcttccaggcggcgaggggctcatcgccgtgaaaaagctcgaggccgccggcgtgcaggccaagcgggagttctgcacggagatcaccatcatcggcaacatccgccacatcaacctcgtccgcctccgcggcttctgcgccgagggttcccgccggctgctcgtctacgagtacatgaaccggggctcgctcgaccggtcactgttcggccgcacggggccggtgctggagtggggggagcgcatggaggtggcgatcggcgcggcgcgcgggctggcgtacctgcacaccgggtgcgagcagaagatcgtgcactgcgacgtcaagccggagaacatcctgctcgccaacggcggccaggtgaagatctcggacttcggcctcgccaagctgatgtcgcgggagcagtcggcgctgttcaccaccatgcgcggcacgcgcgggtacctcgcgcccgagtggatcagcaacgcggccatctccgaccgcgccgacgtctacagcttcggcatggtgctgctcgagctgatacacgggaggaagaaccgcggcgagcaggaggcggcggcgccggccaacaacgtcgccgtcgctgccggcagcggcgagcactcggacttgccgtccggatggagcagcgcgatgacgtcgacggcgagtggcacgagcggcggcggcgacgagtacttcccgatggtggcactggagctccatgagcagcggagatacctggacctcgtcgacgcgaggctggaggggcgcgtcgacgaggccgaagcggcacgcaccgtccgcgtcgcgctctgctgccttcacgaggacccCgcgctgcggccgagcatggccaccgtggtgcggatcctggaaggcagcgtgccgccgccggagccgcgggtcgaggcgctcggcttcctccggctctacggcaggagctatcccttgccggtgccgggttcgttgaccgccatggccggtggtggctcgcatttggacgagtcactaaaggacacgtcagcaccaagatag
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| Protein seq | MPPSRSLACLLLPPLLLLLESVRDADAGPLAVEIVRPSFTATSYDYVDTGGAFLVSRNGSFRAAVFNPGKQQASFYLAVLHAPSGTPVWSANRDAPTSSTGKVQLSVGGITVSDANGTVLWSTPPLRSPVAALRLQDTGDLQLLDAGNATLWRSFDNATDTLLPGQQLLAGAYLSSAKGATDFSQGDYRFGVITADVQLTWQGSTYWRLSNDARGFKDTNAAVASMSVNASGLFAVAADGAMVFRVGLAPAEFRMLKLGSDGRLRIISYALVNSSAPVGGDFIAPAGDCDLPLQCPSLGYCSPAGNGSTCTCPPLFAASVTVAGSCTPGDGSTLASPAACQNNDSSSGGASVSYIALKPLTSYFATKFDAPTNTGVNKTACRALCTASCACLGFFHDSVSLSCRLIGGKQLGSLYKGASDTNLGYIKTFNSATKAGSNQIGSSSANHTVPIVLPSVAAFLLLAVLGWYIWWRNKMSKNGKKKKGKSSTMKVYLGRQKSPSMDTGYNADADDDGGGDDDDIVIPGMPARFSYQEITTMTSNFATKVGSGGFGTVYKGELPGGEGLIAVKKLEAAGVQAKREFCTEITIIGNIRHINLVRLRGFCAEGSRRLLVYEYMNRGSLDRSLFGRTGPVLEWGERMEVAIGAARGLAYLHTGCEQKIVHCDVKPENILLANGGQVKISDFGLAKLMSREQSALFTTMRGTRGYLAPEWISNAAISDRADVYSFGMVLLELIHGRKNRGEQEAAAPANNVAVAAGSGEHSDLPSGWSSAMTSTASGTSGGGDEYFPMVALELHEQRRYLDLVDARLEGRVDEAEAARTVRVALCCLHEDPALRPSMATVVRILEGSVPPPEPRVEALGFLRLYGRSYPLPVPGSLTAMAGGGSHLDESLKDTSAPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 2.390468 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0454900 | RBH | 0.078402 | 0.018903 | 0.856597 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g28180 | RBH | 0.081411 | 0.041519 | 0.188229 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0454900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0012720 | RBH | 0.058689 | 5.674681 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0020990 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0012930 | RBH | 0.0 | 2.704839 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0012710 | RBH | 0.047447 | 0.058869 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0012830 | RBH | 0.318963 | 1.052131 | 0.344533 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0286000 | RBH | 0.4817355 | 19.780196 | 0.7745205 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0012740 | RBH | 0.058864 | 0.195487 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0275500 | RBH | 0.848772 | 22.634204 | 0.5192565 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0012720 | RBH | 0.0 | 0.296060 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0012520 | RBH | 0.055576 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0012610 | RBH | 0.0 | 1.923901 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0012500 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0012530 | RBH | 0.035974 | 1.053468 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G013040 | RBH | 0.0 | 0.753198 | 0.230848 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0012820 | RBH | 0.158257 | 6.355170 | 0.0 |
